Sardina pilchardus (sardine): 134072481
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Entry
134072481 CDS
T10667
Symbol
rxrba
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03320
PPAR signaling pathway
spil04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
134072481 (rxrba)
03320 PPAR signaling pathway
134072481 (rxrba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134072481 (rxrba)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
spil03310
]
134072481 (rxrba)
Transcription factors [BR:
spil03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
134072481 (rxrba)
Nuclear receptors [BR:
spil03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
134072481 (rxrba)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
134072481
NCBI-ProteinID:
XP_062385179
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Position
24:complement(16693113..16712179)
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AA seq
487 aa
AA seq
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MGDSRDSRSPDSSSVSSPPPGQRSPPLAPSAASMTSLPPITSAVNSPISSMGSPFSVISS
SMGSPCLPGTPSVGYGPISSPQMSIYTRSSEINSTVSMSGLHAVSSSDDVKPPFGLKALS
ANSPGGPMMSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCMVD
KRQRNRCQYCRYQKCLAMGMKREVVQDERQRSVQEERQRNKEREGDVESTTAANEEMPVE
KILDAEMAVEQKTELHADGSSGGSSLSSLLQPNDPVTNICQAADKQLFTLVEWAKRIPHF
SELALDDQVILLRAGWNELLIASFSHRSITVKDGILLATGLHVHRNSAHSAGVGAIFDRE
NAHNAEVRAIFDRVLTELVSKMRDMQMDKTELGCLRAIILFNPDAKGLSSPSEVELLREK
VYASLEAYCKQRYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEML
EAPHQLT
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacagtagagattcccgcagccctgacagctcgtctgtgtcgtctccgccccct
ggacaacgctcgccaccattggctccctcggctgcttccatgacgtctctgccgcccatc
acctccgcggtgaacagcccgataagcagcatgggctcccccttctcagtcatcagctcc
tccatgggctcgccctgcctcccaggcacaccctccgttggctatggtcccatcagtagc
ccacagatgagtatctatacaagaagttcagagatcaactccacagtgtccatgtcgggc
ctgcacgcggtcagcagctcagacgatgtgaaaccccccttcggccttaaggctctgtcg
gccaacagccccggggggccaatgatgtcccagaagcgcctgtgcgccatctgcggcgac
cgctcctccggtaagcactatggtgtgtacagctgtgagggctgcaaaggcttcttcaag
cgcacggtgaggaaagacctgagctacacctgccgtgacaacaaggactgcatggtggac
aagcgccagcgcaatcgctgccagtactgccgttaccagaagtgcctggccatgggcatg
aagagagaagtggtccaagatgaacggcagcgatccgttcaagaggagcggcagcggaac
aaggagcgggaaggagacgtggagtccaccaccgccgccaacgaggagatgcccgtggag
aagattctggatgccgagatggccgtcgaacagaagactgaactgcacgccgatgggagc
tctgggggcagctctctttcctctctccttcagcccaacgaccccgtcaccaacatctgc
caggcggctgacaagcagctcttcacgctggtggagtgggccaagaggatcccccacttc
tccgaactggccctggacgaccaggtcatcctgctgcgcgccggttggaacgagctcctg
attgcctccttctcccaccgctccatcactgtgaaggacggcatcctgctggccacgggc
ctccacgtgcacaggaacagtgcccacagcgctggcgtaggggccatctttgacagggag
aatgcgcacaatgctgaggttcgggccatattcgacagggtgctcacggagttggtgagt
aagatgcgtgacatgcagatggacaagactgagctgggctgcctgcgtgccatcatcctc
ttcaacccagatgcaaaaggcttgtccagccccagtgaagtagagttgctgagagagaaa
gtgtatgcgtccctggaggcctactgtaaacagagataccctgagcagcagggcaggttt
gctaagctcctcctccgactgccagccttgcgctccattggtctgaagtgtctggaacac
ctgttcttcttcaaactgattggtgacacccccatcgacaccttcctgatggagatgctg
gaggctccgcatcagctcacctaa
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