KEGG   Sardina pilchardus (sardine): 134072487
Entry
134072487         CDS       T10667                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RING2-A-like isoform X1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:spil00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    134072487
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:spil04121]
    134072487
   03036 Chromosome and associated proteins [BR:spil03036]
    134072487
Enzymes [BR:spil01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     134072487
Ubiquitin system [BR:spil04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    134072487
Chromosome and associated proteins [BR:spil03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     134072487
    Noncanonical PRC1 (PRC1.1)
     134072487
    Noncanonical PRC1 (PRC1.3/1.5)
     134072487
    Noncanonical PRC1 (PRC1.6)
     134072487
SSDB
Motif
Pfam: RAWUL zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 zf-Nse zf-RING_5 RING_XB3-XBAT31 zf-RING_4 zf-rbx1 zf-RING_6 zf-UDP TRAF3_RING zf-C3HC4_5 SpoU_sub_bind Sina_RING zf-ANAPC11
Other DBs
NCBI-GeneID: 134072487
NCBI-ProteinID: XP_062385194
LinkDB
Position
24:24886112..24893260
AA seq 391 aa
MANPVNIQAPSKTWELSLYELHRTPQEAIMDGTEIAISPRSLHSELMCPICLDMLKKTMT
TKECLHRFCNDCIVTALRSGNKECPTCRKKLVSKRSLRHDPNFDALISKIYPSRDEYEAH
QRRALDRFKQLHNPQPLILSIEEGIRLQAKYRPLRVRKAQQDDGDNTTFSGDEENADARS
HASHDSAPSHQTSLLTNHAAEAGPSRAKRPHGSDESGPEADGESPTPPRKLQRNRTKSEI
ELVFHPHPLLVNTDLHGQTRYVKTTANATVDHLSKYLALRIALEERQTDRPAEEPGVGET
ADGDEDSRTRAPVRIRDISEKQYTIYITTSGGQFSTLNGSLTLELVNEKYWKVNKPLELY
YAPTQDQPQQPQQPQQQQAPPQPEKSSSSQL
NT seq 1176 nt   +upstreamnt  +downstreamnt
atggcaaacccagtgaatatccaggctcctagtaagacctgggagctgagtttatacgag
ctgcacagaactccccaggaagccatcatggatggaacagaaattgccatatctccccga
agtctccatagtgagctgatgtgtcccatctgtctggacatgctcaagaagaccatgacc
actaaagagtgcctgcatcgcttctgtaatgactgtattgtcactgccctcagatcaggg
aacaaagagtgccctacctgccgcaagaagctggtgtcaaagcgttcgcttcgccacgac
cccaatttcgacgccctcatctcgaagatctacccgagccgggacgagtacgaggcccat
cagcggcgcgcgctggaccgcttcaagcagctgcacaacccacagccgctcatcctcagc
atcgaggagggcatccgcctgcaggccaaatacagacctctacgggtgcgcaaagctcag
caggatgacggtgacaacaccaccttcagcggcgacgaggagaacgcggacgcccgctcc
cacgcctcccacgactccgccccctcgcaccagacctcactcctgaccaatcacgccgca
gaggcggggcccagccgagccaagaggccgcacggctccgacgagtcgggtcccgaggcg
gacggcgagagccccacgccacctcgcaagctgcagcgcaacagaaccaagtccgagatc
gagctagtgttccacccacaccccctgctagtgaacactgacctgcacggccagacaaga
tatgtcaaaacaacagccaatgccacagtggaccacctctccaagtacctggccttgcgt
atcgccctggaggagagacagacagaccgtccggcggaggagcctggcgtaggggagaca
gcagatggggacgaggacagcaggaccagggcccctgtccgcattcgagacatcagcgag
aagcagtataccatttacatcaccaccagtggcggccaattctctactctgaatggctcc
ctgactctggagctagtgaatgagaagtactggaaggtgaacaaacctctggagctctac
tacgctcccacccaggaccagccacagcagccacagcagccacagcagcagcaggcacct
ccacagccggagaagtcatcttcatcacagctgtaa

DBGET integrated database retrieval system