Sardina pilchardus (sardine): 134072549
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Entry
134072549 CDS
T10667
Symbol
nfatc1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04010
MAPK signaling pathway
spil04020
Calcium signaling pathway
spil04148
Efferocytosis
spil04218
Cellular senescence
spil04310
Wnt signaling pathway
spil04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134072549 (nfatc1)
04310 Wnt signaling pathway
134072549 (nfatc1)
04020 Calcium signaling pathway
134072549 (nfatc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
134072549 (nfatc1)
09143 Cell growth and death
04218 Cellular senescence
134072549 (nfatc1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
134072549 (nfatc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134072549 (nfatc1)
Transcription factors [BR:
spil03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
134072549 (nfatc1)
SSDB
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Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
134072549
NCBI-ProteinID:
XP_062385276
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All DBs
Position
24:18692865..18726282
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AA seq
918 aa
AA seq
DB search
MKSAEEDAYGYPASGGLSLPVSNPYLSPQYHSPQGGPVLSVAITPPSSYGHQEDKVSLGF
YTSAGMRPNSTPALESPRIEITPYSHFSEEEEEGGSGGGTPAGNRIISVATLTLPNADGY
RDPSCLSPASSVSSRSCHSEASSYESGLSCTYDMSPQNSPWQSPCVSPKGGGGGGGGSSS
MHSCTLAASPQPSPSGSPRTSSLGNHSDDAWGTSRPASSPQPSSPCGSKRKYSFGGGGGG
GGGVGGGGGGGGGAYKYPYSPNQSPNPSPHTSPRLSLAEETWLSTTNQYTNSAIVAAINA
LSTDGASDPLGGGGGGESLPLKTRRTGLDPCCPSLSMKVEPRGDELLSGEYSTSDYGSPS
HMPFKKEGYGGGFLDVPQHTYSWSKPKTYISPSLPALDWQLPSSSGPYSLQIDVQPKSHH
RAHYETEGSRGAVKALAGGHPVVQLHGYMESEPLTLQLFIGTADDRMLRPHAFYQVHRIT
GKTVSTPSHEVLQNSTKLLEIPLLPESNMKAIIDCAGILKLRNSDIELRKGETDIGRKNT
RVRMVFRVHISQPNGRTISLQAASNPIECSQRSAQELPLVDKQSLDSCAATGGEKMLLTG
HNFQPDSKVVFVENAQDGHHIWEMEAKVDKEASKSTCLLVEVPTYRNQNIASPVSVSFYV
CNGKRRRSQSQHFTYLPPKVPTIKTEPHDDYELPQLCTQHAPGFPLHSKPYYSPQVLTAA
MPVDPRPGAAGPFGVGAGPQRLGGKPSSLSSPVSGPSLGGSPKLHDLSPTHFPKGLLLGS
PQPPAGSAPPSPASAAQVSAIQATAAAACYQQSAALFHPRVVSAPHLSPSTPERPFSSSL
SPSHAHAPAHELPASVSPQPPKGSPRRSPSAFLPQQGSPSAPAVSIKQEPQELDQMYLDD
VNEIIRNDLSSITVHSHA
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctgccgaagaagacgcatacggctaccctgccagtggcggcctttcgctcccg
gtcagcaacccgtacctgtccccgcagtaccacagtcctcaaggcggtccagtgctctct
gtggccatcacacctccgtccagctacgggcaccaggaggacaaagtgtccctgggcttc
tacacgtcggccggtatgcgccccaatagcaccccggctctggagagcccgcggatcgag
atcacgccgtacagccacttctccgaggaagaggaggaaggcgggagcggcggaggcacg
ccggcgggaaaccggatcatctccgtggcgacgctgacgctccccaacgccgacggctac
cgcgacccgagctgcctgagcccggcgagcagcgtgtcgtcgcgcagctgccactcggag
gcgtcgtcgtacgagtcgggcctgtcgtgcacctacgacatgtcgccgcagaactcgccc
tggcagtcgccctgcgtctcgcccaaaggcggcggcggcggcggcggaggctcgtcgtcc
atgcactcctgcacgctggccgcgtcgccccagccctcgccctccggctcgccccgcacc
tccagcctcggcaaccacagcgacgacgcctggggcacctcccgcccggcctcctccccg
cagcccagctccccctgtggcagcaagcggaagtacagctttggcggcggcggcggcgga
ggtggaggagtaggaggtggtggaggaggaggtggtggggcctacaagtacccgtactcc
cccaaccagtcgcccaacccgtccccccacacctccccgcgcctcagcctggccgaggag
acgtggctgagcaccaccaaccagtacaccaactcggccatcgtggccgccatcaacgcc
ctctccacggacggcgccagcgaccccctcggcggcggcggcggcggcgagagcctcccg
ctgaagacccgccggaccggcctggacccctgctgtccgtccctcagcatgaaggtggag
cccaggggagacgagctgctgtcgggagagtacagcaccagcgactacggctcgccctcg
cacatgcccttcaagaaggagggctacggcggcggcttcctggacgtgccccagcacacc
tactcgtggtcaaagccaaagacatacattagcccgtccttgcccgctcttgactggcag
ctgccatccagctcaggcccctacagccttcagattgacgtgcagcccaagtctcaccac
cgtgcccactacgagaccgagggcagcagaggggcagtgaaggcactcgcaggaggccat
ccggttgtgcagctgcacggctacatggagagcgagccgctgaccctccagctgttcatc
gggacggcagacgaccggatgctgcggccccatgctttctatcaggtccaccgcatcacg
ggcaagactgtgtcaacacccagccacgaggtgctgcagaacagcaccaagctgctggag
atacctctgcttccagagagcaacatgaaggctataatcgactgcgctggcattctcaag
ctgcgcaactcggacatcgagcttcggaagggcgagacggacatcgggcggaagaacacc
cgcgtgaggatggtgttccgggtgcacataagccagcccaacggaaggaccatctccctg
caggccgcctccaaccccatcgagtgctcccagcgatcggcgcaggagcttcccttggtg
gacaagcagagcttggacagctgtgcggccacagggggggagaagatgctcctgaccgga
cacaacttccagcccgactccaaggtcgtgtttgtggagaacgcccaagatggccatcac
atatgggagatggaagccaaagtggacaaggaagcctccaaatcgacatgcttgttggta
gaagtacccacgtacaggaaccagaacattgccagcccggtgtcggtgagcttctacgtg
tgcaacggcaaacgcaggaggagtcagagccagcacttcacctatctgccacccaaagtt
ccaactataaaaacagagccgcatgatgactatgagctccctcagctgtgtacccagcat
gcacctggcttccctttgcattcgaagccttactactccccgcaggtgctgaccgccgcg
atgcctgttgacccgaggcccggcgcggcggggccgtttggcgtcggcgccggcccccag
cgtctcggaggaaagccgtcctcgttgtcctcccccgtctctggcccgtccctcggcggc
agccccaagctccacgacctgtcgcccacgcacttccccaaggggctgctgctcggctct
ccccagccgcctgccggatccgctcctccttcgccggcctccgccgcgcaagtctcggcc
atccaggccacggcggccgccgcctgctaccagcagtccgccgctctcttccacccgcgg
gtggtctccgcgccacacctctccccctcgacgccggagcgccccttcagcagcagcctg
tccccgtcccacgcccacgcccccgcgcacgagctccccgcctcggtgtccccgcagccg
cccaaggggtcgcccaggagaagcccgtccgccttcctgccccaacaggggagcccctcc
gcaccggccgtcagcatcaagcaggagcctcaggagctcgaccagatgtacctggatgat
gtcaacgaaatcatccggaatgatctgtcgagcatcactgtccacagccatgcatag
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