Sardina pilchardus (sardine): 134072552
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Entry
134072552 CDS
T10667
Symbol
zgc:91944
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134072552 (zgc:91944)
Transcription factors [BR:
spil03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
134072552 (zgc:91944)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
Motif
Other DBs
NCBI-GeneID:
134072552
NCBI-ProteinID:
XP_062385280
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All DBs
Position
24:complement(7995961..8043750)
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AA seq
469 aa
AA seq
DB search
MRQWCLPAVAPRTEPLPTGRLSPLSDARMECCDVEPRYTIEQIDLLQRLRLSGMTKPQII
QALDSLERLDSDHRSPSCCDSHPAPPSVVTNTATVASSSSSSSSSLTSATTQTPVIEASL
SPSNSYEASPPPLYPPSGVQRSFSYDLPEEDWDLEEKVEEYMRRDSNLVKEEIKAFLNNR
RISQAIVGQVTGISQSYISQWLLQQGLEMSDSKRRAFYRWYLLERNSPGIRWSESQHMQT
PRSRNDAPWSRQRELLLHLLPWYSAHQQAQTGATLSMRSLVKEEPDWRMGGSPGDRGIMG
GPFRLRRGSRFTWRKECQSIMESFFMENQYPDEAKREEIANACNSVIQKPGCKLSEFERV
TALKVYNWFANRRKEMKRRANIEAAILESHGIEVPSPSCHSNGEDTEPQEFPEQVPQRFT
EQEELAQRKDAEQDGSSLTAMEVPTLPSPSTQLVDQKFEESKREAVDEE
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagtggtgcctaccggccgtggctccacgcactgaaccgctccctacgggccga
ctgtctccgctctcagatgccaggatggagtgttgtgatgtggagcctcgctacaccatc
gagcagattgacctccttcagcgacttagactttcaggcatgaccaaaccgcagatcatt
caggcgctagactctttggagcggcttgattctgaccaccgctccccttcctgctgtgac
agccacccggcccctcccagtgtagttaccaatacagcaacagttgcatcttcgtcgtca
tcatcatcttcctctcttacctccgccactacacagaccccagtgattgaagcctctttg
tcaccaagcaacagctatgaggcctcacctccacccctctatccccctagtggagtacag
cgttcatttagctatgacctgccagaggaggactgggacctggaggagaaggtggaggag
tacatgaggagagatagcaacttggtgaaggaggagatcaaggcctttttgaataaccga
aggatctctcaggccattgtcggacaggtcacaggcatcagccagagctacatctcccag
tggctgctgcagcagggtctggagatgagcgactcaaagcgcagagccttctaccggtgg
tacctgcttgagcgcaacagcccaggaatcaggtggagcgaaagccagcacatgcagacc
cctaggagcaggaatgatgccccttggagtaggcagagggaactgctgctgcacctgctg
ccatggtactctgcccaccagcaggctcagacaggagctacgttgtccatgcgctctttg
gtgaaagaagaacccgactggaggatgggaggtagccctggtgatcggggaataatgggc
gggcctttccggctgcgcagagggagtcgatttacatggaggaaagagtgtcagtcaatc
atggagagtttctttatggagaatcagtaccctgatgaggctaagagggaggagattgcc
aatgcctgcaactcggtcatccagaaaccaggctgcaagctgtccgaatttgagcgcgtc
acggcactgaaggtgtacaactggtttgccaatcgcaggaaggagatgaagagacgagcc
aacattgaggcagctatcttggaaagccatggcatagaggtgcccagccccagctgtcac
tcaaatggggaggatacagagccacaggagttccctgagcaggtgcctcagcgtttcact
gaacaggaggagctggcgcagaggaaggacgctgaacaagatggaagctcattgactgct
atggaggtaccaaccctccctagtccttccacccagctggttgaccagaagttcgaggag
tccaaacgagaggctgtagacgaggagtga
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