KEGG   Sardina pilchardus (sardine): 134072611
Entry
134072611         CDS       T10667                                 
Symbol
hdac1
Name
(RefSeq) histone deacetylase 1 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil03082  ATP-dependent chromatin remodeling
spil03083  Polycomb repressive complex
spil04110  Cell cycle
spil04330  Notch signaling pathway
spil04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:spil00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    134072611 (hdac1)
   03083 Polycomb repressive complex
    134072611 (hdac1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    134072611 (hdac1)
   04350 TGF-beta signaling pathway
    134072611 (hdac1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    134072611 (hdac1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:spil03036]
    134072611 (hdac1)
Enzymes [BR:spil01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     134072611 (hdac1)
Chromosome and associated proteins [BR:spil03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     134072611 (hdac1)
   HDAC complexes
    Sin3A-HDAC complex
     134072611 (hdac1)
    BRAF-HDAC complex
     134072611 (hdac1)
    REST complex
     134072611 (hdac1)
    SHIP complex
     134072611 (hdac1)
    MiDAC complex
     134072611 (hdac1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     134072611 (hdac1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    134072611 (hdac1)
  Chromatin remodeling factors
   NuRD complex
    134072611 (hdac1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 134072611
NCBI-ProteinID: XP_062385371
LinkDB
Position
24:complement(20321000..20328609)
AA seq 491 aa
MALTSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
NGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLG
GGGYTIRNVARCWTYETAVALDSTIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEEDPDKRISIRAHDKRIACEEEF
SDSEDEGQGGGGRRNAANFKKAKRVKTEEEKDGETEKKDACALSPADVKEEEKAPEEKMD
TKGPKEELKTT
NT seq 1476 nt   +upstreamnt  +downstreamnt
atggcgctgacttctcaaggaacaaagaagaaagtttgctattattatgatggtgatgtt
gggaactactactatggccagggccatcccatgaagccccacagaattcgcatgacccac
aatctcctgctcaactatgggctctacagaaagatggaaatctatagaccccacaaggcc
aatggtgaggaaatgaccaagtatcacagtgatgactacatcaaattcctacgctccatc
cggcctgacaacatgtctgagtatagcaaacagatgcagagatttaatgtgggagaggat
tgtcccgtgtttgacggtttattcgagttctgtcagctctcaacaggtggctctgttgct
ggagcagtgaagctgaacaaacagcagacagacatagccatcaactgggcaggaggcctt
caccatgccaagaagtctgaggcgtctgggttctgttatgtcaacgacatcgttttagcc
atcctggagctgctcaagtaccaccagagagtgctgtacatagacattgacattcaccat
ggtgacggcgtggaggaggcgttctacaccactgaccgcgtcatgaccgtgtccttccac
aagtacggggagtacttccctggcacaggagatctccgagacattggagcaggaaagggc
aaatactatgctgtgaactaccccctcagggatggcatcgatgacgaatcttatgaggcc
atctttaagcctatcatggccaaagtgatggagatgtaccagcccagtgccgtagtgctt
cagtgtggagccgactctctgtctggagacaggctgggttgcttcaacctcaccatcaaa
ggccatgccaagtgtgtagagtacatgaagagctttaacctgcccctgctgatgctggga
ggcggaggctacaccatcaggaacgtggcccgctgctggacatacgagacggccgtggcc
ctggacagcaccatccccaacgagctcccgtacaatgactactttgagtacttcggccca
gacttcaaacttcacatcagtccatccaacatgaccaaccagaacacaaatgactacctg
gagaagatcaagcagcgtctgtttgagaacctgcgcatgctgccccacgcccctggtgtg
cagatgcaggccatcccggaggacgctgtgcaggaagacagcggcgacgaggaggaggac
cccgacaagcgcatctccatccgtgctcacgataagaggatagcctgtgaagaggagttc
tccgactctgaggacgagggccaaggcggcggcggacgcaggaacgccgccaacttcaag
aaggccaaacgggtcaagaccgaggaggagaaggacggagagactgagaagaaagacgcc
tgtgctttgtctccagctgacgtgaaggaagaggagaaagcacctgaagagaaaatggac
acaaaggggccaaaagaagagctcaagacaacctga

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