Sardina pilchardus (sardine): 134072632
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Entry
134072632 CDS
T10667
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
spil
Sardina pilchardus (sardine)
Pathway
spil04514
Cell adhesion molecule (CAM) interaction
spil04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134072632 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134072632 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
spil00535
]
134072632 (sdc3)
Proteoglycans [BR:
spil00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
134072632 (sdc3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
GlpR
SDH8
Motif
Other DBs
NCBI-GeneID:
134072632
NCBI-ProteinID:
XP_062385402
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Position
24:11394800..11423057
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AA seq
485 aa
AA seq
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MKLVCWMALALLHGHAASAQQRRLVDDEGSTDEFYDDEDLFSGSGSGFDPDMEVNPTRLD
ASFTTPEPLPLSTTQATGNAPSAPPAPEPSGTPSPSPATDRASGAEENFTEEEDTKRQEE
EERAREQELQQERERKKMEREREREREREREKEREREKEREREQERERERAREREKERER
VKEREREKEKERDREQERERERGRDAEREKEKQRERERTTISLWASSIPMVTTSPAPPPA
PDMLAPSGGPEEFSTAEEEEEIFLTDEPRQPFPTIPWDRDTTTENLPTEEDTPSYNDTST
FPPVTTEPTAPTEEVDDDEEVEEEGEEEEEEETMPPLPATTESTTSIPTTFTTQTQAPDK
EVNNEVALGPSDDFEIRDNNSRQDNDLGTDRSVPEQGAEADLSGNTVDTVGSSAAQLPQK
NILERKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEEPKQATVTYHKPDKQ
EEFYA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtgtgctggatggcgttagctctcctccacgggcatgccgcatcggcccag
caacgtcgcctggtagatgacgaggggtcaacggacgagttctatgacgacgaggatctc
ttctccggctccggctccggcttcgatcccgacatggaggtgaacccgacgaggctggat
gcgtcctttaccactcccgagcccctccctctctccaccacccaggcaacaggcaatgcc
ccctctgcccctccagcacctgagcccagcggcaccccatccccctcccctgctaccgac
agagccagtggtgcagaggaaaatttcaccgaggaggaggacacaaagaggcaggaggag
gaggagagggcgagggagcaggagctacagcaggagagagagaggaagaagatggagagg
gagagagagagggagagagagagggaaagggagaaagagcgagaaagggagaaggagagg
gagagagagcaggagagggaacgagagagggccagggagagagagaaggagagagaaagg
gttaaagagcgagagagggagaaggagaaagaaagggacagggagcaagagagggaaaga
gaaagggggagggacgcagagcgagagaaagagaagcagagggagagagaaaggacaaca
atttccctgtgggcctcctccattcctatggtaaccacaagtccagctccacctcctgct
cctgatatgttggccccctctggtggcccagaggaattcagcaccgccgaggaggaggag
gagattttcctcacagatgagcccaggcaacccttcccaacaatcccctgggacagggac
accacgacagagaaccttcccacggaggaggacacgccctcgtacaacgacacgagcacg
ttcccaccagtcaccacagagcccacggccccgacagaggaagtggacgacgatgaagaa
gtagaagaagaaggagaagaagaagaagaagaagaaaccatgccccctctgccagccacc
actgaaagtaccacaagcatcccaaccactttcacaactcagacacaggcacctgacaaa
gaggtgaataatgaggtggcgctgggacccagtgacgactttgagattcgtgacaacaac
agtcgccaggacaacgacctgggaactgacaggagcgtgccggagcaaggggccgaggct
gacctgtcgggcaacacggtggacacggtgggaagctcggccgctcagctcccacagaaa
aacatcctggagcggaaagaagtcctcatagcggtgatcgtgggcggtgtggtgggtgct
ctgttcgctgccttcctcgtcatgcttctggtttaccgcatgaagaagaaggatgaaggg
agctacacgctggaagagcccaaacaagccactgtcacctaccacaagcctgacaaacaa
gaggagttctacgcataa
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