Sardina pilchardus (sardine): 134072666
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Entry
134072666 CDS
T10667
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134072666 (irx1b)
Transcription factors [BR:
spil03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
134072666 (irx1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
134072666
NCBI-ProteinID:
XP_062385444
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Position
24:21010453..21013316
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AA seq
456 aa
AA seq
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MSFSQLGYPQFLSASPEAYGGERTGVLSASTREGSSESGGNPSAGAPAVTSMLGMYASPW
TAQNYSAFLPYNSAELALLSQMGSQYELKDSPGAHPSGFVHPAPGFYPYGQYQYGDPSRA
KSATRETTSTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKV
TWGRSAEDRDGRIFDSDNEDDHDKNEDDEEIDLESIDVVKTDENTEEQSKLEQVSLDKQS
AGERVNVENIEPKRTLPLPELKGVSDSLAINKEPQVVKNVPALSPDGPGCHRPSNTKPKI
WSLAETATSPDNSQKVGALTAPVGLRTSLPSHHPAFLPTHGIYTCQIGKLHNWAASAAFL
SANSLMNVRSLLGVNQNSHNYSHSPAAHIKRSPSPAGHSGPEGDSENSSDGFSPQRHDQE
NVQRIEPRTPVLRSPFPQMHDRSHHEATHRVLKTVS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttcgcagctgggttacccccagtttttgagcgcctccccagaggcttacggt
ggagagaggaccggggttttgtccgcatcgacccgagaagggagctctgaaagcggtggg
aatccgtctgcaggagcgccggcagtcacatcgatgttgggcatgtatgcaagcccgtgg
actgcgcaaaactatagcgcttttctcccctataacagcgccgaactggcccttctgtcc
caaatgggttcgcaatatgagctgaaggattctcctggtgcccatccttcaggcttcgtg
catccggcccccggcttctacccatacggccagtaccaatacggcgacccgtcccgagcg
aagagtgccacacgggagactacaagcactctgaaagcgtggctgcaggagcacaagaag
aacccttatcccaccaagggagagaagatcatgctggctatcattaccaagatgaccctt
acccaagtgtccacctggttcgccaacgcgcgcaggcgactaaaaaaggagaacaaggtg
acgtggggacgcagcgcagaggatcgtgacggcaggatatttgacagtgacaacgaggat
gatcatgacaagaatgaggatgacgaagaaattgatttggaaagcatcgacgtcgtcaaa
acagacgaaaataccgaggagcaaagtaagctggaacaagtgtccctcgacaagcaaagt
gctggtgaacgtgttaatgtggaaaatattgagccaaaacggactttacctcttcccgag
ctcaagggtgtgagtgattcgcttgctattaataaagaaccacaggttgtcaaaaatgtc
cctgcactttcccccgatggaccgggatgtcacaggccctcaaacactaagccaaagatt
tggtctttggcggagacggcaactagtcctgacaactcccagaaagttggtgcgctcacg
gcccctgtaggcctgcgaacctctctgccgtctcaccaccccgcgtttctcccgactcac
ggaatatacacttgccagattggaaaactgcacaactgggcggcaagtgccgcttttctc
agcgccaattccctaatgaacgtcaggtcacttctaggtgttaatcaaaacagtcacaac
tacagccacagtcccgcggcgcacatcaagaggtcaccgtcaccggctggtcattcagga
ccagagggagacagcgaaaattcgtcggacggcttcagccctcaacgtcatgatcaggaa
aacgtgcagaggatcgaaccacggacaccagtgctgagatcgccattcccacaaatgcat
gacaggtctcaccacgaagcaacacatcgggttttgaagaccgtctcctga
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