Sardina pilchardus (sardine): 134073015
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Entry
134073015 CDS
T10667
Symbol
mib1
Name
(RefSeq) E3 ubiquitin-protein ligase mib1 isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spil04121
]
134073015 (mib1)
Enzymes [BR:
spil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134073015 (mib1)
Ubiquitin system [BR:
spil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134073015 (mib1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SH3_15
Ank_5
MIB_HERC2
Ank_4
Ank_3
zf-C3HC4_3
ZZ
Ank_KRIT1
zf-C3HC4_2
Sina_RING
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
134073015
NCBI-ProteinID:
XP_062385934
LinkDB
All DBs
Position
2:37673647..37733835
Genome browser
AA seq
1059 aa
AA seq
DB search
MTTGRNNRIMMEGVGARVVRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDVRILDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTTCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIFTGGRVVRGVDWQWEDQDGGNGRRGKVVT
EIQDWSAASPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGTFYRDHCPVLGEQNG
SRNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYP
SGNRWTFNPAVLTKANVVRSGEVPAGAEGGASQFLVGDLVQICYDIDRIKLLQRGHGEWA
EAMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVTKVAPSGSAVTNASGERLSQLL
KKLFETQESGDINEELVKAAANGDLAKVEDIMKRPDVDVNGQCAGHTAMQAASQNGHVDV
LKLLLKYSVDLEAEDKDGDRAVHHAAFGDEGSVIEVLQRGGADLNARNKRRQTPLHIAVN
KGHLQVVKTLLDLGCHPSLQDSEGDTPLHDAISKKRDDMLSVLLEAGADVTITNNNGFNA
LHHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGSASL
DVQNVNQQTALHLAVERQHTQIVRLLVRAEAKLDVQDKDGDTPLHEALRHHTLSQLRQLQ
DMQDVSKVEPWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLTIRNKKGQSPLDLC
PDPSLCKALAKCHKEKTSGQVGSRSPSLNSNNETLEECMVCSDMKRDTLFGPCGHIATCS
LCSPRVKKCLICKDQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCAILMKKCVQCR
TVVERRTPFVMCCGGKGMEDATTDDDDDDDDDDDEDLTGGSNSVAGGSQELLQPNNLALS
WLAGGSQELLQPNNLALSWSSGNIPGLQRDKDNTNVNADVQKLQQQLQDIKEQTMCPVCL
DRLKNMIFMCGHGTCQLCGDRMSECPICRKAIERRILLY
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccggaaggaataaccgaatcatgatggaaggagtgggggcaagagttgtccgt
ggaccggactggaaatggggaaaacaggacggtggagaaggacatgttggaacagtgaga
agttttgaaagtcctgaggaagtggtggtagtttgggataacgggactgctgccaattat
cgctgctctggagcctacgacgtgaggatattggacagcgcacccacaggtattaaacat
gatggtaccatgtgtgacacctgccgtcagcagcccatcatcggcatccgctggaagtgc
gccgagtgcaccaactatgacctctgcactacatgttaccatggagacaagcaccacctg
cgacacaggttctacagaatcaccacaccgggcagtgagagggtcctcctcgaatctcga
cggaagtccaagaagatcacggcgcgcggcatcttcaccggaggccgtgtggtgcgggga
gtggactggcagtgggaagatcaggatggcggcaatggccgaaggggcaaggtagttaca
gagatccaggactggagtgcagccagccctcacagcgcggcgtacgtcctctgggacaat
ggtgccaagaacctctacagagttggcttcgagggcatgtcggatttgaaatgtgtccaa
gatgccaaaggaggcaccttttacagagaccactgcccagtattgggagagcagaatggc
agcaggaatcctgggggcctgcagatcggagacctggtcaacatcgacctggacctggag
atcgtgcagtccctgcagcatggccatgggggttggactgatggcatgtttgagacgctc
accaccaccggtaccgtctgcggcatcgacgaagaccacgacattgttgtccagtatcct
agtggaaataggtggacgttcaacccggcagtgctgaccaaggccaacgtggtgcgcagt
ggggaggtgccggcgggtgcggagggtggtgcctcccagttccttgtgggtgacctggtg
cagatctgctacgacatcgaccgcatcaagctgctgcagagaggccacggcgagtgggct
gaagccatgctgccgacactggggaaggtgggccgtgtgcagcagatctactcggacagc
gatctgaaggtggaggtgtgcggcacctcgtggacgtacaacccggccgccgtgaccaaa
gtggctccctctggctcggccgtcaccaacgcctctggagagcgtctctctcagctgctc
aagaagctctttgagacccaggagtcgggtgacatcaacgaggagttggtgaaggcagct
gccaacggtgacctagccaaagtagaggacattatgaagagacctgacgtggacgtgaat
gggcagtgtgcgggccacacagcgatgcaggcagccagtcagaacggccatgtggacgtc
ctcaagctgctgctcaaatacagcgtcgatctggaagccgaggacaaggatggggaccgg
gccgtgcaccacgcggcgtttggggacgagggttcggtcatcgaggtgcttcaacggggc
ggagccgacctcaacgccaggaacaagcgcaggcagacgccgctgcacatcgcggtcaac
aagggccacctgcaggtggtgaagacgctgctggacttgggctgtcatcccagcctccag
gactctgaaggcgacacacccctgcacgacgccatcagtaagaagcgggacgacatgctg
tccgtgctgctggaggccggcgctgacgtcaccatcaccaacaacaacggcttcaacgcc
ctgcatcacgcagccctgcgagggaaccctagtgccatgcgtgttctgctgtccaagctc
cccaggccctggatcgtggacgagaagaaggacgacggctacacggcactgcatctggcg
gcgctcaacaaccatgtggaggtggccgaactcctggtgcaccagggaagtgccagcctt
gacgtccagaatgtcaaccagcagaccgcgctgcacctcgcagtggagcgccaacacacc
cagatcgtccggctcctggtgcgcgcggaggccaagctggacgtgcaggacaaggacggg
gacacgccgctgcacgaggcgctgcgccaccacacgctctcccagctgcggcagctgcag
gacatgcaggacgtcagcaaggtggaaccctgggagccctccaagaacacgttaatcatg
ggcctggggacccagggggctgagaagaagagtgccgcctccattgcgtgcttcctggcg
gccaacggcgccgacctcaccatccgcaacaagaagggccagtcgcccctggacctctgc
ccggaccccagcctgtgcaaagccctggccaagtgccacaaggagaaaacgagtggtcag
gtcggttctcgcagcccgtctctgaacagtaacaacgagacgctggaggagtgcatggtg
tgctcggacatgaagagggacaccctgtttgggccctgcggccacatcgccacctgctcc
ctctgctcgccccgcgtcaagaagtgtctcatctgcaaggaccaggtccagtccaggact
aagatcgaggagtgcgtggtatgctctgataagaaggcagccgttctcttccagccctgc
ggacacatgtgcgcctgtgagaactgtgccattctcatgaagaagtgtgtacagtgtcgc
acggttgtggagcggcgcactcctttcgtcatgtgttgcggagggaaaggtatggaggat
gccactactgatgatgatgatgatgatgatgatgatgatgatgaggaccttacagggggc
tctaactcagtggcagggggttcgcaggagcttctccagcccaacaatctggcgctaagt
tggttggcaggaggttcgcaggagcttctccagcccaacaatctggcgctaagttggtcc
agcggcaacatcccgggtctccaaagggataaggacaacactaacgtcaacgctgacgtg
cagaaactccagcagcagctgcaggacatcaaggagcagaccatgtgtccggtgtgtctg
gaccggctaaagaacatgatcttcatgtgcggccacggcacctgccagctgtgcggagac
cgcatgagcgagtgtcccatctgtcgcaaggccatcgagcgccgcatcttgctctactag
DBGET
integrated database retrieval system
