Sardina pilchardus (sardine): 134073200
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Entry
134073200 CDS
T10667
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134073200 (rnf115b)
04121 Ubiquitin system [BR:
spil04121
]
134073200 (rnf115b)
Enzymes [BR:
spil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134073200 (rnf115b)
Membrane trafficking [BR:
spil04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
134073200 (rnf115b)
Ubiquitin system [BR:
spil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134073200 (rnf115b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-rbx1
Zn_ribbon_19
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
HypA
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
134073200
NCBI-ProteinID:
XP_062386180
LinkDB
All DBs
Position
24:10075675..10081832
Genome browser
AA seq
297 aa
AA seq
DB search
MAEAAMVPRQRFFCHCCKGEIDPKLPEFVCPTCESGFIEEVTEGSSLLATTEANDDVGSQ
FTELWQLLFMERSALLDDPTSAELLSSREEGALEAADRGTQAEPSPPPTAPTEVEPLAQQ
DTDTQQRTRPRPERPPAMEGIVQQFLAGLFANNGNQSSATSSWSLHSNPGDYAWGQGGLD
TVITQLLGQLENTGPPPAEKEMISSLPTVAVSQEQAACRLECPVCREEYAADENVRQLPC
LHYFHSDCIVPWLQMHDTCPVCRKSLNGEDYSLLPEPLAQVPEPSPVTAEPQGGTAL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcgatggttccccggcagcgcttcttctgtcactgctgtaaaggtgaa
atcgatcctaaactcccggagtttgtttgtcccacgtgtgagtctggatttatcgaggaa
gtgacggaggggtcaagtctcttggcaaccactgaagccaacgatgatgtcggctcccag
tttactgagctgtggcagctgcttttcatggagcgctctgccctcctcgacgaccccacc
agtgctgagctgctgtccagcagagaggagggtgcgctggaggcagctgaccggggtacc
caggcagagccatcaccaccgcccacagcacccacagaggtagagcctctggcccagcag
gacaccgacacacagcaaaggactcggccccgaccagagaggccgccagcaatggaaggg
attgtgcagcagtttctggctggtttgtttgccaacaatggaaaccaaagttctgcaaca
tcctcatggtctctgcactcaaacccgggggactacgcgtggggtcagggcggcttagat
acggtcatcacacagttgttgggtcaattagagaacacgggccctccgcctgccgagaaa
gagatgatctcatcactccctaccgtagcggtttctcaggaacaggctgcgtgccgactt
gagtgccccgtgtgccgggaggagtacgcggccgacgagaacgtccggcagctgccctgc
ctgcactatttccatagcgactgcattgtgccatggttacagatgcacgacacgtgtcca
gtatgccgtaagagtctaaacggagaagactacagtttactgccagagccccttgcccag
gttcccgagcccagccctgtcactgctgaaccccagggaggcacagccctgtga
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