Sardina pilchardus (sardine): 134073232
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Entry
134073232 CDS
T10667
Symbol
cdcp1b
Name
(RefSeq) CUB domain-containing protein 1
KO
K06732
CUB domain-containing protein 1
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
spil04090
]
134073232 (cdcp1b)
CD molecules [BR:
spil04090
]
Proteins
134073232 (cdcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB_CDCP1_2
CDCP1_CUB_6
CUB_CDCP1_1
CUB_CDCP1_4th
CUB
Protocadherin
DUF6479
Motif
Other DBs
NCBI-GeneID:
134073232
NCBI-ProteinID:
XP_062386236
LinkDB
All DBs
Position
24:11986970..12003643
Genome browser
AA seq
1037 aa
AA seq
DB search
MPSFSVVWVELLIGLLLLTQASVMSAGVNVTVTPEQGSTITITKDADATADCDACVDGGG
NPRLCDLPEFVLSKPVETIVLFNCTQPQDVYKVKTEGKIACTTDACSPEAGKDQASVFTD
FHRSFLWTIEGPDGTLLNLDFTGEGLKEVPESEVCADGYLYSVSSTDSQGVVLTQNYCRG
GTLTHLELPSKASVSMAVPKQAAVLPVVFNVAPKPKPVKKGRTMAVTPDKDTLVILRREA
AGPECSVCVGAGTDPTCSSDLTLRESLNTTIQFTCEKPEDIYTVEINRDFDFTQGASGKK
EMFAVSSVFPDFQRTFTWDLKVPSSQTFQLDFPGLGMKQIGPSDTCPDEHTYSIITYQRF
GLGTIGTFCKNGSISQIQVLYKGRLALAVPKNKKLDMSAIKVSVGPETKMLAIVQSKLPR
GQSYSDFFSANYLRGFPRDETMQWDFVVPPKHDVTVSFLAVTEPKCGSKAVEVRYEQEGQ
AAVVTSLTEEQPSAQQGSFRLLLQNCDSGRRPDPPGLTLHFRVSALRGGVPHICAVNMQK
EAGITLNIENTNPASYCEMKVDGAFQEKITVPPGSSPSLSFLDCPSKDLRITVTKTIECQ
SLAACPVRQTPLTMPTLEKCLPAPVHDAIWNLRVPEHGTVVLQSPAGTLRQSLPGEECVG
TLSLDVAESDGTPIGQFCSGGVIRKVQIHNNVTVTATTAGGQSLRMGQTALFNISFGPEI
KESIVYHVQPDPNVPTPVLLGTPGWPRAMKPFATVSWIVRLPSQYRADLLFANVSQPKCQ
QRHTNIKVQMIGSEEEILSRREDEEEVGKLSVPGSFYLNMSNCQPESGGFSALSKLMVEK
KNKMLLGIILGVVGALLVLTLVVVVVICAVTKKKKKHTVTNRVSIYNPKGNLFRPNESTF
KPDNGAHIYDAIDENMTYRMGESGYNGGETGVYRPFVSPVEVTPPVIEAPGENNKKEEFS
TFLDPADSFGPPRPRTPLGPVNSLGFEDRRMVDNELYTFKNAGDSNPIRLSDVDPLPPPM
IDDEWDDYDYDNDEDAM
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgccttccttctccgtcgtgtgggttgaactccttattggactgctacttctgacacag
gcttcagtaatgtcagcgggtgtaaacgtcaccgtaacacctgaacagggctcaaccatc
accatcactaaagacgccgacgccacagcagactgtgatgcttgtgtggatggtgggggg
aatcccagactctgcgacctccccgagtttgtgctgtccaagcctgtggaaaccattgtc
ctgttcaactgcacccagcctcaagatgtttataaagtgaagacggagggcaagatagca
tgcactactgatgcctgcagtcctgaggcaggaaaggatcaggcgtctgtcttcacagat
ttccacagaagctttctgtggacgatagagggtcccgatgggactttgttgaatttggac
ttcacaggggagggcctgaaagaagttcctgaatcagaggtctgtgcagatgggtacctt
tactctgtgagtagcaccgactcccagggagtggttctgacccagaactactgtaggggc
ggaaccctgacccatctagaactgcccagcaaggcctccgtgtccatggcggttccgaag
caggcagcggtgcttcccgttgtgtttaatgttgctccgaagcctaagcctgtaaagaag
ggccgaacgatggccgtgacccctgacaaggacaccttggtgatcttgagaagggaggct
gctgggcccgagtgcagtgtgtgtgtgggtgcagggaccgaccccacctgctcatcagat
ctgaccctgcgggagtcgctcaacaccaccatccagttcacctgtgaaaagcctgaagac
atctacacagtggagatcaatagggatttcgatttcacacagggcgccagtggcaagaaa
gaaatgtttgccgtctccagcgtcttcccagacttccaacggaccttcacctgggaccta
aaggtcccatcatcccaaacgttccagctggacttcccaggtcttggcatgaagcagatc
ggtccctcagacacctgccccgatgaacacacctacagcatcatcacgtaccagcgattt
ggactcggtactatcggcaccttctgcaaaaacggctccataagtcaaattcaggttctg
tacaaaggaaggttggccctggctgttccaaagaacaagaaactggacatgtccgctatc
aaagtttctgtcggccccgaaactaaaatgctggccatcgtgcagtccaagctgccccgg
ggtcagtcctactccgacttcttctccgccaactacctccgcggcttcccccgggacgag
accatgcagtgggactttgtggtgccgcccaagcacgacgtcaccgtctccttcctggcc
gtgacggagcccaagtgcggctccaaggcggtggaggtgcgctacgagcaggagggccaa
gcggccgtggtcaccagcctgacggaggagcagccgagtgcccagcagggcagcttcaga
ctcctgctgcagaactgcgactcgggcaggaggcccgatccaccggggctcaccctccac
ttcagggtgtcagcgctgcggggtggcgtgccacatatttgcgctgtgaacatgcagaaa
gaggccggaatcactctgaacattgagaacaccaaccctgcgtcttactgtgaaatgaaa
gtggatggtgctttccaagagaaaatcacagtgcccccaggatcctccccctccctctcc
ttcctggattgccctagtaaagacctacgtatcactgttaccaaaaccatagaatgtcaa
agcctggccgcatgcccagtgagacagacccccctcaccatgcccacgctggagaaatgc
ctacctgcgcccgtccacgatgccatctggaacctccgcgtccccgagcacggcactgtg
gtcctgcagtcgcccgcgggcaccctgcgccagtccctgccaggggaggagtgcgtcggc
acgctctctctggacgtggcggagagtgacggcactcccatcgggcagttctgctcgggc
ggcgtcatccgcaaggtccagatccacaacaacgtcaccgtcactgccaccactgcgggc
ggccagagcctgcgcatgggtcagaccgcccttttcaacatctcttttggacctgagatt
aaagagagcatcgtgtaccacgtgcagcccgaccccaacgtcccgacgcccgtgctcctg
ggcacacccggctggccccgcgccatgaagcccttcgccaccgtctcctggatcgtgcgg
ctgccctcgcagtaccgcgccgacctgctcttcgccaacgtgagccaacccaagtgccag
cagcgccacaccaacattaaggttcagatgattggttcggaggaggagattctgagccga
cgtgaggacgaggaggaggtgggcaagctcagtgtgcccggaagcttctacctgaacatg
tccaactgccagcctgagagcggaggcttcagcgcactcagcaagctcatggtggagaag
aagaacaaaatgctgttgggaatcattctgggtgtcgtcggagctctcttggttctcaca
cttgtcgtggtagtagtcatctgtgcggtgaccaagaagaaaaagaagcacacagtgacc
aatcgagtgtccatctacaaccccaaaggcaacctgttccgcccaaatgagtccaccttc
aagcccgacaacggcgcccatatctacgacgccatcgatgaaaatatgacgtacaggatg
ggggagtccggctacaatggcggcgagacgggagtctaccggcccttcgtcagtcctgtg
gaggtgacgccgcccgtcatcgaggcgcccggcgagaacaacaagaaggaggagttcagc
acgttcctggaccccgccgactccttcggccctccgaggccgcgcacgcctctggggccc
gtgaacagcctgggcttcgaggaccgccgcatggtggacaacgaactatacaccttcaag
aacgccggagactccaaccccatccgcctgtccgacgtcgacccccttcctccgcccatg
atcgatgacgagtgggatgattatgattatgacaatgatgaagatgccatgtga
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