Sardina pilchardus (sardine): 134075125
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Entry
134075125 CDS
T10667
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
134075125 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spil03036
]
134075125 (chd8)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
134075125 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
HDA2-3
Chromo_MIT1
HTH_Hrp3
RcpB
Motif
Other DBs
NCBI-GeneID:
134075125
NCBI-ProteinID:
XP_062386605
LinkDB
All DBs
Position
2:complement(41665764..41690394)
Genome browser
AA seq
2626 aa
AA seq
DB search
MADPIMDLFDDTPLFNLDSLPEDAFSHGSSDPVEEALKLALGQVDPPSDAGTLVLTDPMA
HVSSVPSVSTVTVAPAAPAVAPTVASTVPVQVQTQQPIQVSLTQVPVSIQAPVSVQAMSQ
TPLSVTTSSGTTTVLMSSPLSVSGGQTTTLQLQPQQLAAVTQQAGGQGAPKIVILKGPQG
QMLQGVTGAANSPSGKVTIARVLTGTQLRPGMSIMSGGTVLNTAAPGQGQVKLGAGVQRL
VQTANGPMKQVLLTSVPQSQVQTQPMQVQIQSQAQLGQTQVQQVQQVQQVQQVQLQTQGQ
PQQVQVQMQPQTQQVSLQAAMQTQTVVTTTAGTTMRPQGVTLTTVPQQGGEPKRITLVLQ
QPSQAGQAGAVTVSGATTGTGAAVATVAAGTGQQQQPRLVLGSLPGKLVLQGGQLAALTQ
ARAGQPGAQPKVLTIQLQVQQQPNQQGAKFQLVSGAGGTPQVVQITQGQGGQRLAVPLKL
LLQPQTSGASSGAGTLSVVKVINTSAAGSSTTTTVASPGGVRLAKAQEPVVRRVETLCKQ
EKANRIVAEAIARAKARGERNIPRVLNQDELPSGQTAADAEGLGPATPGAKKKGGGGGGG
GGGKKKSPVAAVAGGKGGAAGGGGDKKGKAKVGGAVGVAGATSGGSKSKGKSKLNTITPV
SGKKRKRNGSSDHSEGEASPAASPRTLEEDMLQTRRSNRQIKRKKYTEDLDIKITDDEDD
GDEDVDVTTPAVVPVAAPSQSMGQQLQQELGVDADGVNMQFFVENPSEEDAAIVDKVLSM
RLTKKELATGQLVNVEEFFVKYKNYSYLHCEWATLEQLERDKRIHQKLKRFKIKHAQMRN
LFQEEEEAFNPDYVEVDRILDESHSVDKDNGEPVVYYLVKWCSLPYEDATWELKEDVDET
KVDEYRVIQDRQACVKRTARPPAASWKKLEEFREYRNGNTLREYQLEGVNWLLFNWYNRQ
NCILADEMGLGKTIQSIALLSEVYAANVHGPFLVIAPLSTITNWEREFTTWTDLNAIVYH
GSLASRQMIQQYEMYCKDDKGHLIPGAYKFDALITTFEMVLSDCPELREISWRCVVIDEA
HRLKNRNCKLLDSLKMLDLEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSETEFLRDFG
DLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFS
FLSLGASNNSNVPNLLNTMMELRKCCNHPYLITGAEEKIVAELREVYDPMASDFHLQALV
RSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLINKRYLYERIDGRVRGNLRQ
AAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQS
KAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKETNVNGQVQQFSKKEIEDLL
RKGAYAAIMDENDEGSRFCEEDIDQILQRRATTITIESEGKGSTFSKASFVASENRTDIA
LDDPEFWQKWAKKADVDFDTMNRKNTLVIDTPRVRKQTRQFSSLKGDSGNDMTDVDSDEE
YTHNSRQQRYSRRSDRHSGNGYGRTDCFRVEKHLLVYGWGRWRDILSHARCKRRLGERDV
ETICRVILVFCLLHYRGDENIKSFIWELITPPENGRAPHALLNHSGLSIPVPRGRKGKRV
KAQSSFDVQKVEWIRKYNPDTLLLDDSYRKHLKHQCNKVLLRVRMLYYLRQEVIGDNADS
VLKGADARDIDIWIPEMEQQEYPSGWWDSDADRSLLIGVFKHGYEMYTTMRADPCLCFLE
RCGRPDDQAIDAEQHSADPELGEGGDYDKYSEDPEFKPQMRHNKDSYDEGDSMNTDEICV
EDRSAPVASEGPSSSQTGSCYWPTSSSLTARLRRLITAYQRSYRREQLKMEAAEKGDKRR
RRCEQASKLKEIARQERQQRWTRREECDFYRVVSTFGVERIKKEPGVPEGEEAEMDWSRF
RTFARLDKKTDESLTRYFRCFTAMCRRVCHLRPSRGEDPSEMSQSLAPITEERASRTLYR
ISLLRRLRDRVLPHASLEERLQLAMPGPELPVWWSAPRHDHELMLGAARHGVSRTEHSIF
HDPEFSFQQARLDYLHNQQASTAAAAAAAGTSSSSTTPSGQVTVKEEGAAEEESRLLGSD
ALCQSDSPAMPLAEHPEGKGRGQAGWGWKKSRGRGSRRGGRKEGGRSEVGEGGGGSDSES
DSDSDSSTSSRRSGSSDESGDSDAERERAMKVCDGDEENSMLSLTPSQEGAQPEAVNDPL
RVDWPKDRVLINRLDSLCSLVLTGHWPAGRRYASDAQMNPPSDEQSDEVGYPRVARRGTG
APGAEGAEGQESEFTVKLLKEEGLKLTFSKQALLPNGEGGGRRKRKDHELLDPEGASVDM
MSPGERAPRRRDLPNWLKENPDYEVEGDMLELLVNRTKRKRRRRKAEKAAALTGDERVKV
INMRTGKKYTGMYGPALQDLREHLEENPDHAVAPEWSETVRNSGFLPESLFHRLLSQHSV
IPKKGQAYLVPTQPDDPLLGGGEGETLVSDGAYMMEEEDLEEGGEMASSHHFLTPSFDVK
MEAGSLEMDGGDSLSQEGYESSDREAILDDVIMASKNSDSSSSSED
NT seq
7881 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccccatcatggacctttttgatgacacccctctgttcaacctggactctctg
ccggaggatgctttctctcacggctcctcggacccagttgaggaagcactaaagctggct
ctgggccaggtagaccctccttcagacgctggcactttggtccttactgaccctatggcc
catgtttcttcagtcccctcagtcagtacagtcacagtcgcccctgcggccccggcggtg
gcccccacagtggcctccactgtcccggtccaagtccagacacagcagcccatacaggtc
tccctcacacaggtcccggtgtccatccaggcccccgtttccgttcaggcaatgtctcag
acgcctctctcggtgactaccagcagcgggaccacaacggtgctgatgagctccccgttg
tccgtctcggggggacagaccaccaccctgcagctgcagccccagcagctcgctgcggtc
acccagcaggcgggaggacaaggggcccccaagatcgtgatcctgaagggcccccagggt
cagatgctgcagggggtaaccggagctgccaattcaccctcgggtaaggttaccatcgcg
cgggtgttgaccgggacccagctcaggcccggcatgtctatcatgtccggggggacggtg
ctgaacacggctgccccaggccagggccaggtgaagctgggcgccggggtccaacgtctg
gtgcagacggccaacgggcccatgaaacaggtgctgctcacctccgtcccgcaatcgcag
gtgcagacgcagccgatgcaggtgcagatccagtcgcaggcgcagctggggcagacgcaa
gtgcagcaggtgcagcaagtgcagcaggtgcagcaggtgcagctccagacgcaagggcag
ccccaacaggtgcaggtgcagatgcagccccagacacaacaggtgtccctgcaggccgcc
atgcagacgcagacagtggtcaccaccacggcgggcaccaccatgcgaccacagggagtc
acactcaccacagtgcctcagcaggggggcgagcctaagaggatcacgctggtgctgcag
cagccctctcaggcaggccaggccggggcggtgactgtaagcggggcgaccactggcacg
ggagcggcggtggcgactgtggcagctggcacgggccagcagcagcagcccaggctggtg
ctggggtccctgccggggaagctggtactgcagggcggccagctggcagcactcacccag
gcccgcgccgggcaacctggggcgcagccaaaggtgctgaccatccagctgcaggtccag
cagcagcccaaccagcagggggccaagtttcagctggtgtctggtgcaggtggcacccca
caggttgtccagatcacacagggacagggtgggcagagactggcagtgcccctcaaactg
ctgctgcagccacagacgagcggcgcgtcgtcgggcgccggcaccctctccgtggtgaag
gtgatcaacacgtcggccgccggctcgtccaccaccaccaccgtggcctcccccggcggc
gtgcgcctcgccaaggcccaggagcccgtcgtgcggcgcgtggagacgctctgcaagcag
gagaaggccaaccgcatcgtggccgaggccatcgcccgcgccaaggcccgcggcgagcgc
aacatcccgcgcgtgctcaaccaggacgagctgccctcgggccagacggcggcggacgcc
gagggcctcggcccggccaccccgggggccaagaagaagggaggcggcggcggcggcgga
ggcgggggcaagaagaagagcccggtggccgccgtggccggagggaaaggaggagccgcc
ggagggggaggagacaagaaaggaaaggccaaggtgggaggcgccgtgggagttgccggg
gcgacaagcggaggaagcaagagcaaaggcaaatcaaaactcaacaccattactccagtg
agtggaaagaagaggaagaggaatggctcctcagaccactctgagggggaggccagtccc
gctgcctcaccacgaacactggaagaggacatgctacagacgcgtcgctccaaccgtcag
atcaagaggaagaagtacacagaggacctggacatcaagatcacagacgacgaggacgac
ggggacgaggacgtggacgtgaccactccggccgtggtgcctgtggccgccccgagccag
tccatgggccagcagctgcagcaggagctgggggtcgatgccgacggcgtcaacatgcag
ttcttcgtggagaatcccagtgaggaagatgctgccattgtggataaagtgttatcgatg
agactaaccaagaaagagctcgctacaggccagttggtcaatgtggaggagttctttgtc
aagtacaaaaactattcttatttacactgtgagtgggccacacttgaacagctggagaga
gacaagagaatccaccagaagctgaagagattcaagatcaaacacgcacaaatgagaaac
ctcttccaagaggaggaggaggcctttaacccagactacgtggaggtggaccgcattctg
gacgagtcccacagcgtggacaaggacaacggagagccggtggtgtactacctggtgaag
tggtgctcgctgccttatgaggatgccacctgggagctgaaggaggacgtggacgagacg
aaggtggatgagtacagggtgatccaggaccgccaggcctgtgtcaagagaaccgcccgc
ccccctgcggcctcctggaagaagctggaggagtttcgagagtaccgcaacggcaatacc
ctgagggagtaccagctggagggggtcaactggctgctcttcaactggtacaacaggcag
aactgtatcctggccgacgagatgggcctggggaagaccatccagtccatcgcgctgctg
tcggaggtgtacgcggccaacgtgcacgggcccttcctggtcatcgcgccgctctccacc
atcaccaactgggagcgcgagttcaccacctggaccgacctcaacgccatcgtctaccac
ggcagcctggccagccggcagatgatccagcagtacgagatgtactgcaaggacgacaag
ggccacttgatcccaggtgcgtataaatttgacgcgctgatcaccacctttgagatggtg
ctgtcggactgccccgagctgagggagatctcctggcgctgtgtggtcatcgacgaggcc
caccgtctcaagaacaggaactgcaagctgctcgacagcctcaagatgctcgacctggag
cataaggtgctgctgacggggactcccctgcagaacacggtggaggagctcttcagcctg
ctgcacttcctggagcccgcccagttcccctcggagacggagtttctgcgggattttggc
gacctcaagacagaggaacaggtgcaaaagctgcaggccatcctgaagcccatgatgctg
cggcgtctcaaggaggacgtggagaagaacctggcgcccaaacaggaaaccatcatcgag
gtggagctgacggacgtgcagaagaagtactaccgcgccatcttggagaggaacttcagc
ttcctcagcctgggcgcctccaacaacagcaacgtgcccaacctgctcaacaccatgatg
gagctgcgcaagtgctgcaaccacccttaccttatcacaggtgcggaggagaagatcgtg
gccgagctgagggaggtgtacgaccccatggcctccgatttccacctgcaggcgctggtg
cgctcggccggcaagctggtgctgctggacaaactgctgccgcggctcaaggccggcgga
cacaaggtgctcatcttctcccagatggtgcgctgtctggacatcctggaggactacctc
atcaacaagcgctacctgtacgagcggattgacggccgggtgcgtgggaatctgcgccag
gcggctatcgaccgcttcagcaagccggactcggaccgcttcgtgtttctactgtgcacc
cgggccggagggcttggcatcaacctcactgcagcagacacctgtgtcatctttgactcc
gactggaacccccagaatgacttacaggctcaggctcgctgtcaccgtattggccagtcc
aaggcggtgaaggtgtaccggctcatcaccaggaactcgtacgagagggagatgctggac
aaggccagcctcaagctgggcctggaccgggccgtgctgcagagcatgagcggcaacaag
gagaccaacgtcaatggacaagtccagcagttctccaaaaaggagatcgaggatcttctg
agaaaaggcgcgtacgccgccatcatggacgagaacgatgagggcagccgcttctgcgag
gaagacatcgaccagatcctgcagcggcgtgccaccaccatcaccatcgagagcgagggc
aagggctccaccttctccaaggccagctttgtggcctccgagaaccgcacggacatcgcc
ctggacgatcccgagttttggcagaagtgggccaagaaggcagacgtggactttgacacc
atgaacagaaagaacactctggtgattgacacgccccgcgtgaggaagcagacgcggcag
ttctccagtctgaagggggacagtgggaacgacatgaccgacgtcgacagtgacgaggag
tacacccacaattcccggcagcagcgctactcccgacgctccgaccgccactccggaaac
ggctacggacgcacagactgcttccgggttgagaagcacctgctggtgtatgggtggggg
cgctggcgagacatcctgtcccacgcgcgctgcaagcgtcggctgggcgagcgggacgtg
gagaccatctgcagagtcatcctggtcttctgcctgctgcattaccgcggcgacgagaac
atcaagagcttcatctgggagctgatcacgcctcctgagaacggccgagctccacacgcg
ctcctcaaccactccggcctgtccatccctgtgcctcgtggccgtaaggggaagagggtg
aaggcccagagctctttcgacgtgcagaaggtggagtggatccgcaagtacaacccagac
acgctgctgctcgacgacagctaccgcaagcacctcaagcaccagtgcaacaaggtgttg
ctgcgggtgcgcatgctctactacctgaggcaggaggtcataggagacaacgctgactcc
gtcctgaaaggagcagatgccagggacatcgacatctggattccggagatggaacagcag
gagtatccatctggctggtgggactctgatgccgaccgctcccttctcattggagtgttt
aaacacggttacgagatgtacactaccatgcgtgccgacccatgcctgtgcttcctggag
cgctgcggtcgccctgacgatcaggccatcgatgccgaacagcactcggctgatccggaa
ctgggagaagggggggactatgacaaatactcagaagacccagagttcaaaccccagatg
agacacaacaaagactcctatgacgagggtgattccatgaacactgatgagatctgcgtg
gaagaccgttctgcccccgtggcatccgaggggccatcctctagccagacgggcagctgc
tattggccgaccagctcgtcgctcactgcccgcttgaggcgcctgatcacggcctaccag
cgcagctaccggcgcgagcagctcaagatggaggccgccgagaaaggggacaagaggcga
cggaggtgcgagcaggcctccaaactcaaggagatcgcccgccaggaacgccaacagagg
tggacccgacgcgaagagtgcgacttctaccgggtggtgtccacgttcggcgtggagcgg
atcaagaaagagcccggcgtcccggagggagaggaggccgagatggactggagccgcttc
cgcacgttcgcccgactggacaagaagacggacgagagcctgacgcgatacttccgctgc
ttcacggccatgtgccgtcgcgtgtgtcacctgcggccctctcgtggagaagacccgtct
gagatgtcccagtctctggcccccatcacggaggagcgcgcctcccgcaccctgtaccgc
atcagtctgctgcggcggctgcgggaccgcgtgctgccccacgcctccctggaggagcgg
ctgcagctggccatgccgggccccgagctgcccgtgtggtggagcgcgccgcgccacgac
cacgagctcatgctgggcgccgcccgccacggcgtcagccgcaccgagcattccatcttc
cacgacccggagttctccttccagcaggcccggcttgactacctccacaaccagcaggcc
tctactgctgctgctgctgccgccgccggcacctcctcctcctccactacgcccagcggg
caggtcacggtcaaagaggaaggggccgcggaggaagagtcgcgcctgctaggctccgac
gccctgtgccagtccgactcccccgcgatgcccctggcggagcacccggagggcaaaggg
cgcgggcaggccggctggggctggaagaagagccggggcagagggtcccggcggggcggc
aggaaggagggcggcaggagcgaggtgggcgagggagggggcgggtccgactcggagtca
gactccgactcagactcgtccacttcgtcccggcgttccggcagctcagacgagagtggc
gacagcgacgcagagcgagagagagctatgaaagtctgtgatggggacgaggagaacagc
atgctttccctcactccgtcacaagagggcgctcaacctgaggctgtcaacgacccgctg
cgggtggactggcctaaggaccgtgtgttaataaaccggctggacagtctttgctcactg
gtgctgacgggacactggccagcagggcggcgctatgcgtcagatgcccagatgaacccg
ccctcagacgagcagagtgacgaggtggggtacccacgcgtggcccgcaggggcaccggt
gcgcccggagccgagggtgccgaaggtcaagaatccgaattcactgtcaagctacttaag
gaggaaggactgaagttgaccttctccaaacaggccctcctgcccaatggcgagggaggt
ggtcggcggaagcgtaaagatcatgagctgctagacccagagggggcatctgtggacatg
atgagcccaggggagcgagccccgcgcagaagggacctgcccaactggctgaaggagaac
ccagactatgaggtggaaggagacatgctggagctgttggtgaacaggaccaaacggaag
cggaggaggaggaaggcggagaaggcagctgcacttactggagatgagagagtgaaggtc
atcaacatgaggacaggaaagaagtatactggaatgtatggccctgctcttcaagaccta
agggaacacctggaagaaaatccggaccacgctgtggcaccagaatggtcggaaaccgtt
cgcaactctggcttcctgccagaaagtctattccatcggctgctttcgcagcactctgtg
atccccaagaagggtcaggcctacctcgtgcccacccagcctgacgatcctcttctcggg
ggaggcgagggcgagaccctggtctcggacggagcgtacatgatggaggaggaggacctg
gaggagggaggagagatggcttcctcccaccacttcctcacaccttcctttgatgtcaag
atggaggccggcagcctggagatggacggcggcgacagcttgtcgcaagagggatatgag
agttccgaccgggaggccattttggatgatgtcatcatggcatccaaaaattcagacagt
tcctccagctcagaggattga
DBGET
integrated database retrieval system
