Sardina pilchardus (sardine): 134075164
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Entry
134075164 CDS
T10667
Symbol
psip1a
Name
(RefSeq) PC4 and SFRS1 interacting protein 1a isoform X1
KO
K25057
PC4 and SFRS1-interacting protein
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134075164 (psip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spil03041
]
134075164 (psip1a)
Spliceosome [BR:
spil03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
134075164 (psip1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
Motif
Other DBs
NCBI-GeneID:
134075164
NCBI-ProteinID:
XP_062386668
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Position
2:complement(42737856..42746071)
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AA seq
526 aa
AA seq
DB search
MQGLNASEGESMARDFRPGDLIFAKMKGYPHWPARIDEVPDGAVKPSNIKFPIFFFGTHE
TAFLGPKDIFPYLPNKDKYGKPNKRKGFNEGLWEIDNNPKVELGGEKQMMSAESAEDKDS
DSSPEGDEEEEDGERGRKATVSGSEAGQEEEEDDDDEEEEGEMEVSGQGPLLEEESTDTS
KPKRGRKKKSETEQDSERDEAAASPTSSPPGGDTPVPKRRGRKPKAEKMLLLQQASHDPH
GSGSDMETTADSERKRKRGSDDKSKHQDEDERRADGRKRKDETKKEPEAKRKRNAKDGSS
SDSEDEEKSSGPGRKRNPLKAQQNTTESDKDERRRKGDDTKELGKEDGKKDERKGDRRKE
MSTEHRLQRLHGEIKISLKIDNPDVKKCLVALDELGSLHVSTQHLQKHSELIATLKKIRR
FKASQDIMDKATMLYNKFKTMFLVGEGDSVLSQVLNKSLAEQKQYEEAKKGALKKAEQAK
EQSAEGQVANGESSPEVKQQEPEQNKAAEESQAVENSAPVAQQESS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtctaaacgcatcagaaggagaaagcatggcacgagatttcagacctggagac
ttaatctttgcaaagatgaagggttatccccattggccagccaggattgatgaagttcca
gatggggctgtgaaaccgtccaatatcaaattccccatcttcttcttcggcacccatgaa
acggcattccttggtcccaaagacatattcccatacttgcccaacaaagacaagtatgga
aaacctaacaagaggaaagggttcaatgaaggcctgtgggagattgataacaacccgaag
gtggagctgggtggagagaagcagatgatgtcagctgagtcggcggaagacaaagactcg
gacagcagccctgagggagacgaggaggaagaggatggggagcgggggaggaaggccacg
gtgtctggcagtgaagcgggtcaggaagaggaggaggatgatgatgatgaggaggaggaa
ggggagatggaggtatcagggcaggggcccctgttggaggaagaatcgacagacacatcg
aaaccaaaaagagggcgaaagaaaaagagtgaaacagagcaagactcagagagagatgag
gctgccgccagtcctacgtcaagtccacctggtggagacacacctgtgcctaagcggcgt
ggcaggaagcccaaagcagagaagatgctcctcctgcagcaggcatcacatgacccccac
ggctcaggcagtgacatggagactactgccgattcagagcgaaagaggaagcgaggatca
gacgacaagagcaaacaccaggatgaagacgagaggagggcggacggcaggaagagaaag
gacgagacgaagaaggagccggaggccaagaggaagaggaacgccaaagatgggagctcc
tcggactctgaggatgaggagaagagcagtggaccaggcaggaagcgcaacccactgaaa
gcccagcagaatacgacagagtccgacaaggacgagcgccggcgcaagggagacgacacc
aaagaattaggtaaagaagacggaaagaaggatgagcggaaaggagaccgaaggaaagaa
atgtccacggagcaccgtctacaaaggttgcatggagagatcaagatctctttgaagata
gacaaccctgatgtgaagaagtgcctggttgcgttggacgagctgggctctctacacgtc
agcacccagcaccttcagaagcacagtgagctgatcgccacgcttaaaaagatccggcgg
tttaaggccagccaggacatcatggacaaggccaccatgctgtacaacaagttcaagacc
atgttcctggtgggcgagggggactccgtgctgagccaggtgctcaacaagtctctggcc
gagcagaagcagtacgaggaggccaagaaaggagcgctgaagaaggccgagcaggccaag
gagcagagcgccgaggggcaggttgccaatggagagtccagtccagaggtgaagcagcaa
gagcctgagcagaacaaagccgctgaagagagccaagctgtggagaacagtgcgccagta
gcccagcaggagtccagctga
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