Sardina pilchardus (sardine): 134075212
Help
Entry
134075212 CDS
T10667
Name
(RefSeq) integrin beta-1-like
KO
K05719
integrin beta 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03271
Virion - Rotavirus
spil04145
Phagocytosis
spil04510
Focal adhesion
spil04512
ECM-receptor interaction
spil04514
Cell adhesion molecule (CAM) interaction
spil04517
IgSF CAM signaling
spil04518
Integrin signaling
spil04530
Tight junction
spil04810
Regulation of actin cytoskeleton
spil04820
Cytoskeleton in muscle cells
spil05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
134075212
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134075212
04514 Cell adhesion molecule (CAM) interaction
134075212
04517 IgSF CAM signaling
134075212
04518 Integrin signaling
134075212
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
134075212
09144 Cellular community - eukaryotes
04510 Focal adhesion
134075212
04530 Tight junction
134075212
09142 Cell motility
04820 Cytoskeleton in muscle cells
134075212
04810 Regulation of actin cytoskeleton
134075212
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
134075212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134075212
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spil04147
]
134075212
04515 Cell adhesion molecules [BR:
spil04515
]
134075212
04090 CD molecules [BR:
spil04090
]
134075212
Membrane trafficking [BR:
spil04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
134075212
Exosome [BR:
spil04147
]
Exosomal proteins
Proteins found in most exosomes
134075212
Cell adhesion molecules [BR:
spil04515
]
Integrins
Integrin beta subunits
134075212
CD molecules [BR:
spil04090
]
Proteins
134075212
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
I-EGF_1
PSI_integrin
EGF_2
EGF_Teneurin
vWA_SIBA-E
DUF2975
Tc-R-P
Motif
Other DBs
NCBI-GeneID:
134075212
NCBI-ProteinID:
XP_062386729
LinkDB
All DBs
Position
2:44596474..44623793
Genome browser
AA seq
805 aa
AA seq
DB search
MDPKLLLLALLGVFSLSQAQLEENECIKANAKSCGACIQVGEKCGWCTDPDFLKEGESTS
ARCDEVESLVKRKCAAASIENPRGSLQVTQNKNVTNRKDKDKAEKLKPDEITQIQPQKLS
LNLRSGEAQQFTLKFKRAEDYPIDLYYLMDLSWSMKDDLENVKNLGTDLRRRMQDITSDF
RIGFGSFVEKTVMPYISTTPAKLLNPCSTDQNCTSPFSYKNVLKLTNEGERFNQLVSQQQ
ISGNLDSPEGGFDAIMQVAVCGDQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGK
CHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTNEFQPVYKELQNLIPKSAVGTL
SSNSSNVINLIIDAYNSLSSEVILENNKLPEGVSISYVSHCKNGVSRTGEDGRKCSNISI
GDEVTFDVAITFTGCKPNEKGALEKKPETVRIKMQGFTEEVEVQLKFICECDCHKAGINN
SQICHFGNGTFECGACRCNEGRIGQKCECSTDEVRTEDLDASCRMENGTDICSNNGDCVC
GTCECKKRENPEERYSGKYCECDNFNCDRSNNKLCGGHGRCECRQCICDANYTGSACDCS
LDTSTCLAKNKQICNGRGTCECGVCKCTDLKFQGATCEVCPTCPGVCTEHKECVQCRAFG
TGEKKETCERDCMYFHLEMVKSRDDLPQPGSVPFISHCKERDANDCWFYYTYAVKNDTSK
IVHVVETAECPDGPDIIPIVAGVVAGIVLIGLALLLIWKLLTIIHDRREFAKFEKEKMNA
KWDTGENPIYKSAVTTVVNPKYEGK
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggatcctaagctccttctgttggccctgctgggagtgttttctctgagtcaagctcaa
ctcgaggagaatgagtgcatcaaagccaacgctaagtcctgtggagcctgtatccaggtt
ggagagaaatgtggctggtgcacggaccctgacttcctgaaagagggtgagtcgacgtca
gcacgttgtgacgaggtggagtccctggtcaagaggaagtgtgctgcagccagcatcgag
aacccccgcggatctctgcaggtcacacagaacaagaacgtgaccaaccgcaaggacaag
gacaaggcagagaagctgaaacctgacgagatcacccagatccagccgcagaaactcagc
ctcaatctgagatcaggagaggctcagcagttcaccctgaagttcaagcgggctgaggac
taccctatcgacctgtactatttgatggacctcagttggtccatgaaggacgatctggag
aacgtcaagaaccttggaaccgacctgcggcgtagaatgcaggacatcacctccgacttc
aggattggttttggttcgtttgtggagaagacggtgatgccgtacatcagcacgacgcct
gctaagctgctgaacccgtgcagcacggatcagaactgcaccagccccttcagctacaag
aacgtgctgaagctgaccaacgaaggggagcgcttcaaccagctggtcagccagcagcag
atctccgggaacctggactcccccgagggaggcttcgacgccatcatgcaggtggccgtg
tgcggggaccagattggctggcggaacgtgacgcggttgctggtgttctccacggacgct
gggttccacttcgccggtgacggcaagctgggcggcatcgtcctgcccaatgacgggaaa
tgccacctggagaacaacatgtacaccatgagccactactatgactatccctccatcgcc
cacctggtgcagaagctgagtgagaacaacatccagaccatcttcgctgtgaccaatgag
ttccagcctgtctacaaggagttgcagaacctcatccccaaatctgcagtgggaacactc
tcttctaactccagcaatgtcatcaacctcatcattgacgcctacaactctctgtcgtct
gaggtgatcctggagaacaataagcttcctgagggcgtgtccatctcctacgtctcccac
tgcaagaatggagtgagtcgcacaggggaagatggacgcaagtgctccaacatctccatc
ggagacgaggtgacgtttgatgtggccatcacgttcacgggttgcaaacccaatgaaaag
ggtgcgttggagaagaaaccggagacggtgaggatcaagatgcagggcttcactgaggag
gtggaggtgcagctcaagttcatctgcgagtgtgactgccacaaggccggcatcaacaac
agccagatctgccactttgggaacggcaccttcgagtgtggggcttgccgctgtaatgag
gggcgcattggtcagaagtgtgagtgcagcacagacgaggtgcggacggaagacctggac
gccagctgccgcatggagaacggcacggacatctgcagcaacaacggcgactgtgtgtgc
ggcacgtgcgagtgcaagaagagggagaaccctgaggagcgctacagcggcaaatactgc
gagtgtgacaacttcaactgtgaccgctccaacaacaagctctgcggaggccacgggcgc
tgtgaatgccgccagtgcatctgtgatgctaactacacgggcagcgcttgcgactgctct
ctggacacctccacctgtctggccaagaacaagcagatctgtaacggccgcggtacctgt
gagtgtggagtgtgtaagtgcactgacctcaagttccaaggagccacttgtgaagtgtgc
cccacctgtccgggcgtgtgtacagagcacaaggagtgtgtgcagtgccgtgccttcggt
acaggtgagaagaaggagacgtgtgagcgtgactgcatgtatttccacctggagatggtg
aagagccgtgatgatctcccacagcctgggtcagtgcccttcatctcccactgcaaagag
cgcgatgccaacgactgctggttctactacacctatgccgtcaagaacgacaccagcaag
atcgtccatgtggtggagactgcggagtgccctgacggtcctgacatcatccccatcgtg
gcgggcgttgtggctggaatcgttctgattggcctggccctgcttctgatctggaagctg
ctgactatcatccacgaccgccgtgagttcgccaagttcgagaaggagaagatgaacgcc
aagtgggacacgggcgagaatcccatctacaagagcgccgtgacaaccgtcgtcaacccc
aagtacgagggcaaatga
DBGET
integrated database retrieval system