KEGG   Sardina pilchardus (sardine): 134075212
Entry
134075212         CDS       T10667                                 
Name
(RefSeq) integrin beta-1-like
  KO
K05719  integrin beta 1
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil03271  Virion - Rotavirus
spil04145  Phagocytosis
spil04510  Focal adhesion
spil04512  ECM-receptor interaction
spil04514  Cell adhesion molecule (CAM) interaction
spil04517  IgSF CAM signaling
spil04518  Integrin signaling
spil04530  Tight junction
spil04810  Regulation of actin cytoskeleton
spil04820  Cytoskeleton in muscle cells
spil05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:spil00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    134075212
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    134075212
   04514 Cell adhesion molecule (CAM) interaction
    134075212
   04517 IgSF CAM signaling
    134075212
   04518 Integrin signaling
    134075212
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    134075212
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    134075212
   04530 Tight junction
    134075212
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    134075212
   04810 Regulation of actin cytoskeleton
    134075212
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    134075212
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:spil04131]
    134075212
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spil04147]
    134075212
   04515 Cell adhesion molecules [BR:spil04515]
    134075212
   04090 CD molecules [BR:spil04090]
    134075212
Membrane trafficking [BR:spil04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    134075212
Exosome [BR:spil04147]
 Exosomal proteins
  Proteins found in most exosomes
   134075212
Cell adhesion molecules [BR:spil04515]
 Integrins
  Integrin beta subunits
   134075212
CD molecules [BR:spil04090]
 Proteins
  134075212
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail EGF_integrin I-EGF_1 PSI_integrin EGF_2 EGF_Teneurin vWA_SIBA-E DUF2975 Tc-R-P
Other DBs
NCBI-GeneID: 134075212
NCBI-ProteinID: XP_062386729
LinkDB
Position
2:44596474..44623793
AA seq 805 aa
MDPKLLLLALLGVFSLSQAQLEENECIKANAKSCGACIQVGEKCGWCTDPDFLKEGESTS
ARCDEVESLVKRKCAAASIENPRGSLQVTQNKNVTNRKDKDKAEKLKPDEITQIQPQKLS
LNLRSGEAQQFTLKFKRAEDYPIDLYYLMDLSWSMKDDLENVKNLGTDLRRRMQDITSDF
RIGFGSFVEKTVMPYISTTPAKLLNPCSTDQNCTSPFSYKNVLKLTNEGERFNQLVSQQQ
ISGNLDSPEGGFDAIMQVAVCGDQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGK
CHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTNEFQPVYKELQNLIPKSAVGTL
SSNSSNVINLIIDAYNSLSSEVILENNKLPEGVSISYVSHCKNGVSRTGEDGRKCSNISI
GDEVTFDVAITFTGCKPNEKGALEKKPETVRIKMQGFTEEVEVQLKFICECDCHKAGINN
SQICHFGNGTFECGACRCNEGRIGQKCECSTDEVRTEDLDASCRMENGTDICSNNGDCVC
GTCECKKRENPEERYSGKYCECDNFNCDRSNNKLCGGHGRCECRQCICDANYTGSACDCS
LDTSTCLAKNKQICNGRGTCECGVCKCTDLKFQGATCEVCPTCPGVCTEHKECVQCRAFG
TGEKKETCERDCMYFHLEMVKSRDDLPQPGSVPFISHCKERDANDCWFYYTYAVKNDTSK
IVHVVETAECPDGPDIIPIVAGVVAGIVLIGLALLLIWKLLTIIHDRREFAKFEKEKMNA
KWDTGENPIYKSAVTTVVNPKYEGK
NT seq 2418 nt   +upstreamnt  +downstreamnt
atggatcctaagctccttctgttggccctgctgggagtgttttctctgagtcaagctcaa
ctcgaggagaatgagtgcatcaaagccaacgctaagtcctgtggagcctgtatccaggtt
ggagagaaatgtggctggtgcacggaccctgacttcctgaaagagggtgagtcgacgtca
gcacgttgtgacgaggtggagtccctggtcaagaggaagtgtgctgcagccagcatcgag
aacccccgcggatctctgcaggtcacacagaacaagaacgtgaccaaccgcaaggacaag
gacaaggcagagaagctgaaacctgacgagatcacccagatccagccgcagaaactcagc
ctcaatctgagatcaggagaggctcagcagttcaccctgaagttcaagcgggctgaggac
taccctatcgacctgtactatttgatggacctcagttggtccatgaaggacgatctggag
aacgtcaagaaccttggaaccgacctgcggcgtagaatgcaggacatcacctccgacttc
aggattggttttggttcgtttgtggagaagacggtgatgccgtacatcagcacgacgcct
gctaagctgctgaacccgtgcagcacggatcagaactgcaccagccccttcagctacaag
aacgtgctgaagctgaccaacgaaggggagcgcttcaaccagctggtcagccagcagcag
atctccgggaacctggactcccccgagggaggcttcgacgccatcatgcaggtggccgtg
tgcggggaccagattggctggcggaacgtgacgcggttgctggtgttctccacggacgct
gggttccacttcgccggtgacggcaagctgggcggcatcgtcctgcccaatgacgggaaa
tgccacctggagaacaacatgtacaccatgagccactactatgactatccctccatcgcc
cacctggtgcagaagctgagtgagaacaacatccagaccatcttcgctgtgaccaatgag
ttccagcctgtctacaaggagttgcagaacctcatccccaaatctgcagtgggaacactc
tcttctaactccagcaatgtcatcaacctcatcattgacgcctacaactctctgtcgtct
gaggtgatcctggagaacaataagcttcctgagggcgtgtccatctcctacgtctcccac
tgcaagaatggagtgagtcgcacaggggaagatggacgcaagtgctccaacatctccatc
ggagacgaggtgacgtttgatgtggccatcacgttcacgggttgcaaacccaatgaaaag
ggtgcgttggagaagaaaccggagacggtgaggatcaagatgcagggcttcactgaggag
gtggaggtgcagctcaagttcatctgcgagtgtgactgccacaaggccggcatcaacaac
agccagatctgccactttgggaacggcaccttcgagtgtggggcttgccgctgtaatgag
gggcgcattggtcagaagtgtgagtgcagcacagacgaggtgcggacggaagacctggac
gccagctgccgcatggagaacggcacggacatctgcagcaacaacggcgactgtgtgtgc
ggcacgtgcgagtgcaagaagagggagaaccctgaggagcgctacagcggcaaatactgc
gagtgtgacaacttcaactgtgaccgctccaacaacaagctctgcggaggccacgggcgc
tgtgaatgccgccagtgcatctgtgatgctaactacacgggcagcgcttgcgactgctct
ctggacacctccacctgtctggccaagaacaagcagatctgtaacggccgcggtacctgt
gagtgtggagtgtgtaagtgcactgacctcaagttccaaggagccacttgtgaagtgtgc
cccacctgtccgggcgtgtgtacagagcacaaggagtgtgtgcagtgccgtgccttcggt
acaggtgagaagaaggagacgtgtgagcgtgactgcatgtatttccacctggagatggtg
aagagccgtgatgatctcccacagcctgggtcagtgcccttcatctcccactgcaaagag
cgcgatgccaacgactgctggttctactacacctatgccgtcaagaacgacaccagcaag
atcgtccatgtggtggagactgcggagtgccctgacggtcctgacatcatccccatcgtg
gcgggcgttgtggctggaatcgttctgattggcctggccctgcttctgatctggaagctg
ctgactatcatccacgaccgccgtgagttcgccaagttcgagaaggagaagatgaacgcc
aagtgggacacgggcgagaatcccatctacaagagcgccgtgacaaccgtcgtcaacccc
aagtacgagggcaaatga

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