Sardina pilchardus (sardine): 134076105
Help
Entry
134076105 CDS
T10667
Name
(RefSeq) intraflagellar transport protein 56-like isoform X1
KO
K19685
intraflagellar transport protein 56
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
spil03037
]
134076105
Cilium and associated proteins [BR:
spil03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
134076105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
ANAPC3
TPR_14
TPR_2
TPR_16
TPR_6
TPR_Slam
TPR_9
TPR_1
Motif
Other DBs
NCBI-GeneID:
134076105
NCBI-ProteinID:
XP_062387094
LinkDB
All DBs
Position
3:12644929..12653016
Genome browser
AA seq
564 aa
AA seq
DB search
MILSRVKPAIGGEAPVVKRVKGKGSPLVEDYLSERDYVGAITLLEFQRSIGERGEDADLW
LAYCAFHMGDHKRAMQEYKALTEKPDCRPDVWVFLACTLFFLGFYKEAEEAANKAPKSQL
QNRLMFHLAHKFSDEKKLMGFHQKLEDKDEDQLSLASIHYMRSHYQEAIDIYKRILLQNR
DFLALNVYVALCYYKLDYYDVSQEVLAVYLQTVPNSTIALNLKACNHFRLFNGKAAEAEL
RNLIDISSSTDFAKELIKHNLVVFRNGEGAMQVLSPLVDVIVEARLNLVIYYLRQDDVQE
AYNLTKDMEPSQPQATGSVRLNIHQRTEYILKGVVHAALGQEVGSRDHLKMAQQFFQLVG
GSASECDTIPGRQCMASCFFLLRQFEDVLIYLNSIKSYFYNDDTFNFNYGQAKAAVGNFK
EAEEIFLLIQSERIKNDIVYLGWLARCYIMNQRPRLAWELYLKMETSADTVGLLQLIAND
CYKMGQFYYAAKAFDVLERLDPSPEFWEGKRGACVGIFQLILAGREPRETLREVLPLLRT
TGNPQVEYIVRILKKWAKDNRVSL
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgattctttccagggtcaagccagctattggtggtgaagctccagtcgttaagagagtc
aaagggaaagggtccccattagtggaagattatctcagtgaaagagactatgtgggagcc
atcacattacttgagttccaacgcagcattggagaacgaggcgaggatgcagacttatgg
ctggcatactgtgcttttcacatgggtgaccacaaacgagcaatgcaggagtacaaggct
ttaacagaaaagccagactgccgcccagatgtatgggtgtttttggcatgcactctcttc
ttcctgggtttctacaaagaggcagaggaggcagccaataaggctcccaagagtcagctt
cagaatcggcttatgttccacttggcacacaagttcagtgatgagaaaaagctgatgggc
ttccatcagaaactcgaggacaaagatgaggatcaactcagcttagcctccatccactac
atgcgctcacactaccaggaggctatcgacatctacaagcgcatcttactgcagaacagg
gacttccttgccttgaatgtctatgtagctctgtgttactacaagttggactactatgac
gtctcccaggaggtcttggcagtatacttgcagacagttccaaactcgacgattgccctc
aatctcaaggcctgcaaccacttcaggctcttcaatggcaaggcagctgaggcagaactg
aggaacctgattgatatatcttcttccactgatttcgccaaggagcttatcaagcacaat
ttggtggtgttccggaatggagaaggggccatgcaggtgctttctccacttgttgatgtg
attgttgaggccagacttaacctggtcatctattacctcagacaagatgatgttcaagag
gcctacaatctcaccaaggacatggagccctcccaaccacaggctacaggcagtgttagg
cttaatatacatcagcggacagagtacatattgaagggcgtagtacatgcagctcttggt
caagaagtgggctctagggatcacttgaagatggcacaacagttctttcagcttgtcgga
ggctctgcaagtgagtgtgacacaattcctggcaggcagtgcatggcgtcttgttttttc
ctgctccggcagtttgaggacgtgctcatctaccttaactctatcaagagctatttctac
aatgatgacacgttcaacttcaactatggacaagcaaaagctgctgttggcaacttcaaa
gaagcagaggagatattcctgttgatccagagtgagaggataaaaaatgacattgtgtac
ttgggttggctggcacgttgctacatcatgaaccagaggccgcggcttgcctgggagctc
tatctgaagatggagacatcagctgataccgttggcctacttcagctcattgccaatgac
tgctataagatgggacagttctactatgccgcaaaggcatttgatgtcctggaacgttta
gatcctagcccagagttctgggagggcaaaagaggtgcttgtgtggggatctttcagctt
attctggctggccgagagccaagagaaactttgagggaggttctgcccttgttgagaacc
acaggaaacccacaggtggagtacatcgtcaggatcctgaagaagtgggccaaagacaac
agggtgtctctgtga
DBGET
integrated database retrieval system
