KEGG   Sardina pilchardus (sardine): 134076297
Entry
134076297         CDS       T10667                                 
Symbol
cldn18
Name
(RefSeq) claudin-18 isoform X1
  KO
K06087  claudin
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil03272  Virion - Hepatitis viruses
spil04382  Cornified envelope formation
spil04514  Cell adhesion molecule (CAM) interaction
spil04530  Tight junction
Brite
KEGG Orthology (KO) [BR:spil00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    134076297 (cldn18)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    134076297 (cldn18)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    134076297 (cldn18)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    134076297 (cldn18)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:spil03037]
    134076297 (cldn18)
   04147 Exosome [BR:spil04147]
    134076297 (cldn18)
Cilium and associated proteins [BR:spil03037]
 Other cilia and associated proteins
  Stereociliary proteins
   134076297 (cldn18)
Exosome [BR:spil04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   134076297 (cldn18)
  Exosomal proteins of colorectal cancer cells
   134076297 (cldn18)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Amastin DUF2569
Other DBs
NCBI-GeneID: 134076297
NCBI-ProteinID: XP_062387266
LinkDB
Position
3:38880678..38891593
AA seq 247 aa
MASTMLQTGAFVLGILGVAALIAATAMNNWSSQDRQGNVVTAVYTYKGLWRNCEVSTSGF
TECRPFYGLLGYAGSFQAVRALMIVGIVMGVISALISLFSLKCFRMGNMEDSTRGKMTLT
AGILFMVAGICGIAGASIYANQIVASFRSTMYNYNDGGMGQMGGIGGMGGMGGGNLIPRY
TFGPALFVAWVGGALVLLGGILDCVAYKGLLPEKTSYGAVAYKAPSHHNATVQHIATEEG
RRDQKYV
NT seq 744 nt   +upstreamnt  +downstreamnt
atggcctccaccatgttacagactggtgcttttgtcctgggcattcttggtgttgcagct
cttattgctgccactgccatgaataactggagcagtcaggatcgtcaggggaatgttgta
actgctgtgtacacttataagggactttggagaaattgtgaagtatccacatcagggttt
accgaatgtcggcctttctatggtctcctgggttacgcaggttcttttcaagctgtgaga
gccctgatgattgtgggaatcgttatgggagtcatcagtgctttgattagccttttctcc
ctgaagtgctttagaatgggcaacatggaagattctaccaggggaaaaatgactctgact
gctggaatcctgttcatggttgcaggtatttgtggcatcgctggagcctcaatctatgcc
aatcagattgtggctagttttagaagtaccatgtacaactacaatgatggtggcatggga
cagatgggaggaattggaggcatgggcggaatggggggaggaaaccttattccaaggtac
acttttggacccgcgctttttgtggcttgggtaggaggagcattggtgctgttgggtggg
atattggattgtgttgcctacaaaggacttctgcctgagaagactagctatggagcagtg
gcttacaaagccccttcccaccacaatgcaactgtacagcacattgccactgaagaagga
aggagagaccaaaaatatgtctga

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