Sardina pilchardus (sardine): 134076319
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Entry
134076319 CDS
T10667
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spil03036
]
134076319 (mms19)
03400 DNA repair and recombination proteins [BR:
spil03400
]
134076319 (mms19)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
134076319 (mms19)
DNA repair and recombination proteins [BR:
spil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
134076319 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
Adaptin_N
HEAT_ECM29
HEAT
PDS5
DUF7514
IFRD
Motif
Other DBs
NCBI-GeneID:
134076319
NCBI-ProteinID:
XP_062387284
LinkDB
All DBs
Position
3:complement(488575..532288)
Genome browser
AA seq
1027 aa
AA seq
DB search
MAADSTLLLGLVEEFVSGQQDTKAVETAKGVKTGQFTVLQLVEALGLSLTSSQHDTRARG
VKLLSQVLQECYSCLNEREVEVLVAFYENRLKDHYVIIPHVLQGLKALTKTSALPPGSAV
SMLKSVFQDTHVQSLMIQERSCVYNILINLMESRQQELKGLGSDFVFGFVQSMDGERDPR
NLLLAFQIARKIVVGGYDMGKFTEELFEVTSCYFPIDFTPPPNDPHGITQEDLIVSLRAV
LTGTPLFAEFLMPLIIEKLDSDVQSAKVDSLQTLAACGPVYGHKELSQFLSGLWSSLRRE
VFQTSSERVEAAALSALSSLTTCLSRSITTSDSDHALDTLLQLVLKDCQHHLLEPDMKLV
WPSAKILQTVAAASYRAHLSMATAVIPLLVEQYITRTQSAQRRTLLEVLQGFTQPSETSR
PAEGEECVLLQFQASLCAVVFSALTETGAGLQISATRILSTLGQQTGLLTPADVVLAVDH
LTTLILQEDDPQVSAAVMECCGSLAPRHPAAFTSRMLPKLKECIFTERMVQGDGVAPAVW
GSQNAVRQRCVTALARVACEPSLVRESSPVLLELLTTAHTGCGSFSVDEVISVCHGLQRI
AEHAPHMEAEIGQFFHDVIIPRLLGLAVQAAVQDEGSCGRSFLTEEAVLAVVVPVFSSSC
SRLNADCAVSTASRVVSLFLHGDVSFLPHDLQHTTIPLLKTPSLQVSQLVCLLTACVCSL
PRSVEIPEIDRLLEELEEVSCTHTHSFTHTSAAKCYAGLINKRPSGPALDAALERSVKRI
SAELDNSASCLQTQALTLLLWVTKGLLLRYHPLSSALTDKLFSLLSDRSLGPLVADGFAL
LMSDSPDVLNRGCHADVRIMYRQRFFSENSAKLVQGFHSAPPEEKAGYLKALSHIMNNLP
RQVQLTELPALLPLFLEALSCPDVCVQLSTLSCLQPVLLDPPTALTNQMEALIPRLLTLT
TSPAMKVRIAALRCIHSLSRLPDHMMLPFRARVLRALAVPLDDKKRLVRKEAVLARGEWF
LLGSPGR
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacagcacccttctcctcggcttagtggaggaattcgtctcgggccaacag
gacacgaaagccgttgagaccgcgaaaggagtcaagacgggacagttcaccgttctgcag
ctggtggaggcattgggtttgagtctcaccagctctcagcatgatactcgggcgagaggc
gtcaagctcctgtcacaggtcctgcaggagtgttacagctgcctgaacgagagagaggtg
gaggtgctggtggcgttctatgagaaccggctgaaggatcactatgtcatcatcccccac
gtcctacaggggctcaaggctctgacgaagacatcagcgttgcccccagggtcagcagtg
tccatgctgaaatctgtgttccaggacacacatgtgcagtctctgatgattcaggagcga
tcatgtgtgtacaacatcctgatcaacctcatggagtctcgacagcaggagctgaagggg
ctggggtcggactttgtgtttgggttcgtccagtcgatggacggcgaacgtgatccacgg
aacctcctgctggcgttccagatcgcgcgcaagatcgtcgtcgggggttacgacatgggg
aaattcacagaggagctgtttgaagtcacttcctgctacttccccatagatttcacaccg
cctcccaacgacccgcacgggatcactcaggaggatctcatcgtctccctcagagccgta
ctgactggaaccccactgtttgcagagttcctgatgcccctcatcattgagaagctggac
tccgatgttcaaagtgccaaagtggattctcttcagacactggctgcctgtggtcctgtg
tatggacacaaagagctctcccagttcctctcaggcctctggtcatctctacgcagagag
gtgttccagacgtctagtgagcgtgtagaggcggcagctctctctgctctgagctctctg
accacctgcctctcccgctccatcaccacctccgactcggaccacgcactggacacactc
ctgcagctcgtgctcaaagattgtcagcaccacctgttggagccggatatgaagctggtg
tggccgagtgccaagatcctgcagacggtggcggccgcgtcgtaccgggcgcacctgagt
atggccaccgccgtcataccgctcctagtggagcagtacatcacccgcacgcagagtgct
cagcggcgcaccctactggaggtgttgcagggcttcacccagccatcagagaccagcaga
cctgcagagggagaggagtgtgtgctgctgcagttccaggcctctctgtgtgctgttgtg
ttctctgctctcaccgagaccggagccggcctgcagatctcagccactcgcatcctcagc
actctgggacagcagacaggtttgttgacccccgctgatgttgtgctggcagtggatcat
ctgaccacactcatcctgcaggaggacgacccgcaagtcagtgctgcagtgatggagtgt
tgtgggtcgttggctcctcgtcaccctgctgcgttcacctccaggatgctgccgaaactc
aaagagtgcatcttcaccgagcggatggtccagggggacggtgtcgccccagctgtgtgg
ggctcccagaatgccgtgcggcagaggtgtgtgactgctctggcacgagtggcgtgtgaa
cccagcctggtgcgggagagctcacctgtactgctggagctgctaacaaccgctcacaca
ggctgtggctctttctcggtggatgaggtcatctctgtgtgccacggtctgcagaggata
gcagagcatgccccacacatggaggcagagattggacagttcttccatgatgtcatcatt
ccgcgactcctggggctggcggtgcaggctgcagtacaggatgaaggttcttgtgggcgg
agcttcctgactgaggaggcggtccttgctgttgtagttccggtcttcagcagttcctgc
tctcgcttgaatgcagactgtgccgtgtcgactgcatctagagtcgtgtctctcttcctc
cacggtgacgtgtccttcctgccacacgacctccagcacaccaccatcccgcttctcaag
actccttcccttcaggtgtcccagctggtgtgtctgctcacggcatgtgtgtgttcgcta
ccacggagtgtggagatcccagagattgacaggctgctggaggagctggaagaggtcagc
tgcacacacacacactctttcacacacacgtctgcagccaagtgttacgcaggcctcatc
aacaagaggccaagcggtcctgctctagatgctgctctggagcggagtgtgaagaggatc
agtgctgagctggacaacagcgcctcctgtctgcagacccaggcacttacactgctgctc
tgggtgaccaaaggtctgctgctgcggtaccaccccctctcttcagctctgacagacaag
ctcttctcgttgctaagcgaccggtcgctagggccgctggttgccgacggcttcgctctc
ctcatgagcgactcgccggacgtcctgaaccgcggttgccatgccgacgtgcgcatcatg
taccgccaacgcttcttctccgagaactctgcgaaactggtgcagggattccactccgca
cccccagaagagaaggcggggtatctgaaggctctgtcgcacatcatgaacaacctgccc
agacaggtgcagctgaccgaactacctgcgctgctgccgctgttcctggaggcgttgtcg
tgtcctgacgtgtgtgtgcagctgtccacactctcctgcctgcagcccgtactgctggac
ccccccacagccctgaccaatcagatggaggccctcatcccacgcctgctcacactcacc
accagccctgccatgaaagtacgcatagccgccctgcgctgcatccactccttgtcccgc
ctgcctgatcacatgatgctgccgttccgagcgcgtgtgctgcgagcgctggcggtgccg
ctggatgacaagaagaggctggtgaggaaggaggctgtgctggcccggggggagtggttc
ctgctgggaagcccaggaaggtga
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