Sardina pilchardus (sardine): 134076354
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Entry
134076354 CDS
T10667
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil00260
Glycine, serine and threonine metabolism
spil00630
Glyoxylate and dicarboxylate metabolism
spil00670
One carbon pool by folate
spil01100
Metabolic pathways
spil01200
Carbon metabolism
spil01230
Biosynthesis of amino acids
spil01240
Biosynthesis of cofactors
spil04981
Folate transport and metabolism
Module
spil_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
134076354 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
134076354 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
134076354 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
134076354 (shmt1)
Enzymes [BR:
spil01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
134076354 (shmt1)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
SHCBP_N
Motif
Other DBs
NCBI-GeneID:
134076354
NCBI-ProteinID:
XP_062387343
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Position
3:complement(3518748..3525903)
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AA seq
507 aa
AA seq
DB search
MDITRSLPPRPAAVWLHHGSTQPIMDYSNGHQIDNDTWDSHNKMMLEPLCTNDPEVFEII
KNEKKRQTYGLELIASENFTSRAVLEALGSCMNNKYSEGYPGQRYYGGTEHVDELELLCQ
KRALEVYGLDSDKWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDK
KKISATSIFFESMPYKVNPDTGYIDYDRLQENARLFHPKMIIAGTSCYSRNLDYARMRKI
ADENGAYLMADMAHISGLVAAGVVPTPFEYCDIVTTTTHKTLRGCRSGAIFYRKGVRSVD
PKTGKETMFNLESPINQAVFPGLQGGPHNHAIAGVAVALKQALTPEFKVYQKQVVANCRA
LASTLMNKGYKIVTGGSDNHLILLDLRPSGSDGGRAEKVLEACAIACNKNTCPGDKSALR
PSGLRFGSPALTSRGLVEEDFCQVAEFIHRGIELTIEIQTSMNPKATLKEFKETLAQSEK
FQMKVKTIKEDVEAFGGKFPMPGLPQL
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggatatcacgagaagtctgccgccccggccagctgcagtttggttgcatcatggcagc
acacaaccaatcatggattattcgaacggtcaccaaattgacaatgacacgtgggattct
cacaacaaaatgatgctggaaccgctgtgtaccaatgatcccgaggtgtttgaaataatc
aagaatgaaaaaaaaaggcagacgtatgggctggaactcatcgcctcagagaatttcacc
agtcgggcggtcttggaagctctgggctcctgcatgaacaacaaatactcggagggttac
cctggccaaaggtattatggaggcactgagcatgttgatgagctggaattgttgtgtcag
aagagggctttggaagtctacggccttgactctgataaatggggggtcaacgttcagcca
tactcaggttcgccggcaaactttgctgtatacacagccttagtagaaccccatggcaga
attatgggccttgaccttccagacggaggtcacctcacacatggcttcatgactgacaaa
aagaagatatcggcaacctccatattctttgaatctatgccatacaaggtcaacccggac
actggttacattgactatgatcgcctgcaggaaaatgcccgcctttttcatccaaagatg
atcattgcaggcacaagttgttactcgcgcaacctggattatgcgcgcatgcgaaagata
gcggatgagaacggagcgtatctaatggcggacatggcccacatcagcggcctggttgca
gccggagtggtgcccactccctttgagtactgcgacattgtgaccacaaccacacacaag
acactccgaggctgcagatcgggagccatcttctacaggaagggggtacgcagtgtcgac
ccaaagactggcaaggagaccatgttcaacctggagagcccaatcaaccaggctgtattc
ccagggctgcaagggggtccccacaaccacgccattgcaggagttgctgtggcactgaaa
caggccctgaccccagagttcaaagtctaccagaaacaggtggtggcaaactgcagagct
ctggcatccacactgatgaacaagggctataagattgtgacaggtggctctgacaatcac
cttatcttgcttgaccttcgacccagcggcagcgatggaggaagggcagagaaggtcctg
gaggcgtgtgctattgcctgcaacaaaaatacgtgcccaggagacaaaagtgccctgcgg
cccagcggcctgcgtttcggctcgccggccctcacctcccgggggctcgtggaggaggac
ttctgtcaagttgccgagttcatccacagaggcattgagctcaccatcgagatccagacc
agcatgaaccccaaggccactctgaaggagttcaaggagacgctggcccaaagtgagaag
ttccaaatgaaagtgaaaacgataaaggaggacgttgaggcttttggtggcaagttcccc
atgcctggacttccacagttgtga
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