Sardina pilchardus (sardine): 134076368
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Entry
134076368 CDS
T10667
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04120
Ubiquitin mediated proteolysis
spil04137
Mitophagy - animal
spil04144
Endocytosis
spil04340
Hedgehog signaling pathway
spil04350
TGF-beta signaling pathway
spil04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134076368 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
134076368 (smurf1)
04350 TGF-beta signaling pathway
134076368 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134076368 (smurf1)
04137 Mitophagy - animal
134076368 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
134076368 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134076368 (smurf1)
04121 Ubiquitin system [BR:
spil04121
]
134076368 (smurf1)
03029 Mitochondrial biogenesis [BR:
spil03029
]
134076368 (smurf1)
Enzymes [BR:
spil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
134076368 (smurf1)
Membrane trafficking [BR:
spil04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
134076368 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
134076368 (smurf1)
Ubiquitin system [BR:
spil04121
]
Ubiquitin ligases (E3)
HECT type E3
134076368 (smurf1)
Mitochondrial biogenesis [BR:
spil03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
134076368 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
134076368
NCBI-ProteinID:
XP_062387366
LinkDB
All DBs
Position
3:complement(3841289..3878319)
Genome browser
AA seq
751 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRSCVSVTGLPDPFAKVVVDGSGQCHSTDT
VKSTLDPKWNQHYDLYIGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGY
QRLDLCKLNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENEGGRVGVSLCSTVFE
DSGPGRPLSCFMEEPLPYTDPTGAAGGGNCRALESPNQEQRLQAQRVRNQDSRGHAHTPQ
NRPHGNQTPELPEGYEQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVSCEDLGPLPPG
WEVRSTVSGRIYFVDHNNRTTQFTDPRLHHIMSSQQSQVKESTQALPVQMEVPVEEGGEG
GGELPARYERDLVQKLKLLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKK
RLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHL
SYFHFVGRIMGLAVFHGHYINGGFTLPFYKQLLGKPIQLSDLETVDPELHKSLVWILEND
ITSVLDHTFCVEHNAFGKFLQHELKPNGRNLAVTEDNKKEYVRLYVNWRFMRGIEAQFLA
LQKGFNELIPQHLLKPFDHKELELIIGGLGKIDLSDWKANTRLKHCVADSNIVKWFWQAV
ESFDEERRGRLLQFVTGSTRVPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCF
NRIDVPPYESYEKLYEKLLTAVEETCGFAVE
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactcgaaggaacgggtccagcattaaaatcagactgacagtatta
tgtgccaagaatctagcaaagaaagacttcttccgctcatgtgtttctgtcacagggtta
cctgaccctttcgccaaagttgttgtcgatggctcaggtcagtgccactccacagacaca
gtcaagagcacactggaccccaaatggaaccagcattatgacctgtatattgggaagacg
gactcgatcaccatcagtgtgtggaaccacaagaagatccacaagaaacagggcgcgggc
ttcctgggctgtgtgaggctgctgtccaatgctatcagccgactcaaagacactggctac
cagcgtttggacctatgcaaactcaacccctcagacagcgatgcagtgcgtgggcaaata
gtcgtgagcttgcagaccagagaccggattggcagtggggggccagtggtggactgcaga
gggctgttagaaaatgaaggggggcgtgtcggtgtgtccctctgcagcacggtgttcgag
gactcgggcccggggaggccgctcagctgcttcatggaggagccgctgccctacacggac
cccaccggggcggccggcggcggcaactgccgcgccctggagtcgcccaaccaggagcag
cggctccaagcacaacgcgtccgcaaccaggactcccggggccacgcgcacacgccccag
aaccggccgcacggcaatcagacgcccgaactgcccgagggctacgagcagaggaccacg
gtgcagggccaggtctacttcctgcacacacagaccggcgtgagcacctggcatgacccc
aggataccacgggacctgaacagtgtgagttgtgaggacctgggccccctgcccccgggc
tgggaggtcaggagcacggtgtcaggaaggatttattttgtggaccacaataaccgaacg
acacaattcaccgacccccggttacatcacatcatgagcagccagcagtctcaggtgaag
gagtcgacgcaggcgctgccggtgcagatggaggtgccggtggaggagggcggtgagggt
gggggcgagctgccggcgcgctacgagagggacctggtgcagaagctcaagctgctgcgc
cacgagctctccctgcagcagccgcaggccggacactgccgcatcgaggtgtcccgcgag
gagatcttcgaggaatcgtacagacagatcatgaagatgaggccaaaagacctgaagaaa
cgactgatggtgaagtttcgcggagaggaaggcctggactatgggggtgtggccagggaa
tggctgtatctcctttgccacgagatgttaaatccgtactacgggctgtttcagtattcg
acagacaacatctacaccctgcagatcaatcccgactcgtccatcaaccctgaccacttg
tcttacttccattttgtggggcggatcatgggcctggccgtgttccacggccactacatc
aacggcggcttcacgctgcccttctataagcagctgcttgggaagcccattcagctgagc
gacctggagacggtggaccccgagctgcacaaaagcctcgtctggatcctggagaatgat
atcacgtctgttctggaccacacgttctgtgtagagcacaacgcctttggcaagttcctc
cagcacgaactcaagcccaacggcaggaacctcgccgtcactgaggacaacaagaaagaa
tacgtcaggctctatgtaaactggcggttcatgaggggcatcgaggcccagttcctggcc
ctgcagaagggcttcaacgagctcatccctcagcatctactcaagccattcgaccacaag
gagctggagctgatcatcggcggcctgggaaagatcgacctgagcgactggaaggcgaac
acgcggctcaagcactgcgtggccgacagcaacatcgtgaagtggttctggcaggcggtg
gagtcgttcgacgaggagcggaggggcagactcctccagtttgtgactggctccacgcgg
gtcccgctgcaaggcttcaaagcactgcaaggctctacaggttccgcaggcccaagactt
ttcactatccacttgattgatgccaacacggacaacctgcctaaagcccatacatgcttc
aaccgcatcgatgtcccgccttacgagtcgtatgagaagctctatgagaagctcctgact
gccgtagaagagacctgtggctttgctgtggagtga
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