Sardina pilchardus (sardine): 134076388
Help
Entry
134076388 CDS
T10667
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
spil01001
]
134076388
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spil04121
]
134076388
Enzymes [BR:
spil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
134076388
Protein kinases [BR:
spil01001
]
Serine/threonine kinases: Other
Other
134076388
Ubiquitin system [BR:
spil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
134076388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
WD40
ARM_PUB
LisH
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
zf_topless
Motif
Other DBs
NCBI-GeneID:
134076388
NCBI-ProteinID:
XP_062387402
LinkDB
All DBs
Position
3:4159470..4181399
Genome browser
AA seq
1616 aa
AA seq
DB search
MLRIDLRFWKKVRGMAGAAEASVDSKAELTSLLEQWDREQLGTTPVLVAILTKISELVER
ETEEYRKADPDPFDDRHPGRADPECMLGHLLKILFKNDDFMNALVNAYVMTSREITLNTA
ACRLLLNIMPGLETAVVFQEKEGIVEKLFKWAQEAEQPLRIYSVGLLAGAMENQDIAANY
REENSVLVPLMLQRLRELQEREVENRRDFRRPSPRKASSLEPLLPLDEETVDCANFEDKN
GMDKCGVVGGVEEEESPVKRGDCFGLEPIVESPFSLGSAQKSSSRANSAKKPLPKMEGPE
GEAPGPDESDGRAEGGRLAQKRAERENGRKAKQKLNFTLSEPERSFSELSNSSWSEMSPW
VIGQNYHLDPLTPAIEQRLILQYLTPLGEYQELLAVFMQLGARQLLMHYMDLKQTNDVQL
TFEALKYLASLLLHKKFAAEFVAHGGVQKLLEIPRPSMAATGVSLCLYYLAYNQDAMERV
CMLPHSILSEVVKYTLWLLECSHASGCCHATMFFSISFSFRAVLELFDQQDGLRRLVNLI
STLEILNPEDQGALLSDDEIFSSRQTAKHTCMALRRYFEAHLAIKVEQVKQSLQRTEGGA
PIHPQPYYKACTYTHEQVVEMMEFLFEYGPVRLYWEPAEVFHKLSCVQLLLQLISIACDW
RTYYGRSDTVRYALDILSILTVVPKTQLMLADSVAVLDEGGSTISTVGMSIVLVVAEGEV
FINDAEIQKSALQVVINCVCAPDKRVSSIGKFMGGTPRRRLPQSHRASESVLAKMWNVVQ
SNNGIKVLLSLLTVKMPITDADQIRALACKALVGLARSAAVRQIISKLPLFGSGQIQTLM
KEPVLQDKRSEHVRFCKYSAELIERVSGKPLLMGTDVSLARLQRASVVAQSRISFPEKEL
LLLIRNHLVAKGLNDTATTLTKEADLPMAPLAHSHPVPFAAPGAVSLAQPGAPVPILPRT
PRLANGVAARLGSHASATSPILHAQPRPSTSQLHALPLPSSSSSSTSSSLASSLSAAVAS
ASASSSAASSSSSSSVVPQGGSAQAAGVTHSNGSPLIGRILFTRERLPSPCVAGRKPRVL
RQKSDHGAFSQSPAMKKQLDRHLPSPPALDSIITEYLREQHARCKNPVTTCPLFSLFTPH
QCPEPKQRRQAPANFAPRHTRRTVYPKYGGVDGGCFDRHLIFSRFRPISVFREADEDESG
FMCCAFSARERFLMLGTCTGQLKLYNVFTGQEEASYNCHSSAITHLEPSRDGSLLLTSAS
WSYPLSALWGMKSVFIMKHSFLDDHYVEFSKLSQDRVIGTKEHVAHIYDIQTGQKTLTLN
NPDLANNYKKNCATFNSTDDLVLNDGVLWDVRSAQAIHKFDKFNMNISGVFHPSGQEVII
NTEIWDLRTFHLLHTVPALDQCRIVFNNNGTVIYGAMRQADDDDDMLEQQMKSPFGSSFR
TFDATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDAINMDTVCRLYEVGRQRLAEEE
EDEEDQDEDDQEDDDDDDDSDDDIDDIDMDDIETDPILAELNDNNGEEEDGDNDFSPSDD
EEVARLLEEEGEDDDDDDDDDDDSDDNDDDADLVLDNTDSSDNSDLEDDIILSLNE
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggatagacctgcgtttttggaaaaaagtcagggggatggcaggggcggccgag
gccagtgtggactccaaggctgagctcacttctctgttagagcaatgggacagagagcaa
ctgggaaccacaccggtcctagtggctatcttaaccaagatctcagaactggtggagaga
gagacggaggagtaccgaaaagccgaccctgacccctttgatgaccgtcacccaggacga
gctgacccagagtgcatgctgggacacctgctgaaaatcctattcaagaatgatgacttt
atgaacgctctggtgaacgcatatgtgatgaccagtagggagattaccctcaacaccgct
gcctgccgcctcttgctgaacatcatgccggggctggaaaccgctgttgtatttcaggag
aaggaggggattgtggaaaagttgttcaaatgggctcaggaggcagagcagcccttgagg
atctattctgtgggcctcctggcaggagctatggagaaccaagacattgctgccaactac
cgtgaagaaaactctgtactggtgccactgatgttgcagcgtttgcgagagctgcaggaa
cgggaggtggagaacaggagggacttcaggaggccgagccctcgcaaggcctccagcctg
gagccgctgctgcctctggatgaggagacggtggactgtgccaacttcgaagacaagaac
gggatggacaaatgcggggtggtgggaggggtcgaagaggaggagagccccgtgaaaaga
ggagattgtttcggactggagcccatcgtcgagtctcccttcagcctcgggtcggcgcag
aagtccagcagtcgcgctaactcggccaagaagcctctccccaagatggagggccccgag
ggcgaggcccccggacccgacgagtctgacgggcgcgcggagggcgggaggctggcgcag
aagagggcggagcgggagaacgggcgcaaggcgaagcagaagctgaacttcaccctgtcg
gagccggagcgcagcttcagcgagctgagcaacagcagctggtcggagatgagcccgtgg
gtgattggtcagaactaccacctcgacccgctcacccctgccatcgagcagcgtctcatt
ctgcagtacttgacccctctgggcgagtaccaggagctgttggcggtgttcatgcagctg
ggagccagacagcttctcatgcattacatggacctgaaacagaccaatgacgtgcagtta
actttcgaagctctcaagtatctggcctccctgctgctgcacaagaagtttgcggcggag
tttgtggctcatggtggagtgcagaagcttctggaaatcccacggccctcgatggccgcc
accggcgtttccttgtgtctgtattacctggcctataatcaggatgccatggagcgggtg
tgtatgctcccccactcgatcctctctgaggtggtgaagtacacgctgtggctgttggaa
tgctcccatgcctcaggctgttgccatgccaccatgttcttctccatctccttctccttc
cgggctgttctggaattgtttgaccagcaggatggactgcgtcgtctcgtcaatctgatc
agtactctggaaatcttaaacccagaggatcagggtgcacttctaagtgatgacgagatc
ttctccagtcgacagacagccaaacacacctgtatggccttgcgtaggtactttgaggcg
cacctggccatcaaggtggagcaggtcaagcagtccctgcagcgtacagaagggggcgct
ccaatccacccgcagccctattacaaggcgtgcacgtacacccacgagcaggtggtggag
atgatggagttcctgtttgagtatgggccggtgcgtctttactgggagccagccgaggtc
ttccacaagctgtcctgcgtgcagcttctgctgcagctcatttcaattgcctgcgactgg
aggacctactatggcaggagtgatacggtacgttacgctctggacatcctgagcatcttg
acggtggtgcccaagacccagctgatgctggcggattcagtggccgtgctggacgagggg
ggctccaccatctccaccgtgggcatgagcatcgtgctggtcgtcgccgagggcgaggtg
ttcatcaacgacgccgagatccagaagtcggcgctgcaggtggtcatcaactgcgtgtgc
gcgcccgacaagcgcgtgtccagcatcggcaagttcatggggggcacgccgcggcgccgc
ctgccccagagccaccgcgccagcgagagcgtgctggccaagatgtggaacgtggtgcag
tccaacaacggcatcaaggtgctgctgtcgctgctcacggtcaagatgcccatcacggac
gccgaccagatccgcgcgctggcctgcaaggcgctggtggggctggcgcgctcggccgcc
gtgcggcagatcatcagcaagctgccgctgttcggcagcgggcagatccagacgctgatg
aaggagcccgtgctgcaggacaagcgcagcgagcacgtgcgcttctgcaagtactcggcc
gagctgatcgagcgcgtgtcgggcaagccgctgctgatgggcaccgacgtgtcgctggcg
cggctgcagcgggcgagcgtggtggcgcagtcgcgcatctccttccccgagaaggagctg
ctgctgctcatccgcaaccacctggtggccaagggcctgaacgacacggccaccacgctg
accaaggaggccgacctgcccatggcgccgctggcgcacagtcacccggtgcccttcgcc
gcgccgggcgccgtctcgctggcgcagccgggcgcgcccgtgcccatcctgcccaggact
ccgcggctggccaacggggtggcggcacggctggggagccacgcttctgccacgtcgccc
atcctccacgcccagccgcgcccctccacctcccagctccacgcgctccccctcccctcc
tcctcctcctcctccacctcctcgtccctggcctcctccttgtccgccgccgttgcctcc
gcatccgcctcctcctccgccgcctcctcctcctcctcctcctccgtcgtgccccagggc
gggtccgcgcaggcggcgggcgtcacccacagcaacggctcgccgctgatcggccgcatc
ctcttcacgcgggagcgcctcccgtcgccgtgcgtggcgggccgcaagccgcgcgtgctg
cgccagaagtcggaccacggcgccttcagccagagccccgccatgaagaagcagctggac
cgccacctgccctcgccgccggcgctcgacagcatcatcaccgagtacctgcgcgagcag
cacgcccgctgcaagaaccccgtcaccacgtgcccgctcttcagcctcttcacgccgcac
cagtgccccgagcccaagcagcggcggcaggcgcccgccaacttcgcgccgcgccacacg
cgccgcaccgtctaccccaagtacggcggcgtggacggcggctgcttcgaccgccacctc
atcttcagccgcttccggcccatctcggtgttccgcgaggccgacgaggacgagagcggc
ttcatgtgctgcgccttctcggcgcgcgagcgcttcctcatgctgggcacctgcaccggg
cagctcaagctctacaacgtcttcaccggccaggaggaggccagctacaactgccacagc
tccgccatcacgcacctggagccctcccgggatggctctctgctgctcacctcggcctct
tggagttaccctctctcggccctctggggcatgaaatccgtcttcatcatgaagcattcc
tttttagacgatcattacgtggagttcagtaaactttctcaagaccgggtcatcgggacg
aaagagcacgtcgcccatatatacgacatccagacaggccaaaaaacgctcactctcaac
aaccccgacctggcgaacaactacaagaagaactgcgccacgttcaactccacggacgat
ctggtcctgaatgacggggtcttatgggacgttcgctccgctcaagccatccacaagttt
gacaagttcaacatgaacatcagcggcgtgttccatcccagtggtcaggaggtcatcatc
aacacagagatctgggatctacggacatttcacctgcttcacacggtcccagctcttgat
cagtgcagaattgtgttcaataacaatggaactgttatctacggagcaatgcggcaggct
gatgatgatgacgacatgctggagcagcagatgaagagtccctttggctcctccttccgc
acatttgatgccacagactacaaacccatcgccactattgatgtgaagaggaatatattt
gatctgtgcacggacacaaaagattgctacctggccgtgatagagaaccaggacgcaatt
aacatggacacagtgtgtaggctgtatgaggtggggaggcaacgattggcagaggaagag
gaggatgaggaagaccaggacgaggacgatcaagaagatgatgatgatgacgatgactct
gatgacgacatcgacgacatcgacatggatgatattgaaacagaccccatcttggcggag
ctgaacgacaacaatggcgaggaggaggatggcgacaacgacttctctccatcagatgat
gaagaggtggcgcgtttgcttgaagaggagggagaggatgatgatgatgacgatgatgat
gatgacgactctgatgataatgacgatgatgcagacttagtcctggataacacagacagc
tcggacaactctgatctggaggacgacatcatcctgtctctgaacgagtga
DBGET
integrated database retrieval system
