Sardina pilchardus (sardine): 134076427
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Entry
134076427 CDS
T10667
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
134076427
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
Motif
Other DBs
NCBI-GeneID:
134076427
NCBI-ProteinID:
XP_062387476
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Position
1:12308213..12323416
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AA seq
627 aa
AA seq
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MSDGPPAMAAPVCLIENTDQGLQTVESSLNLLRRIQQPVVVVAVVGLYRTGKSYLMNRLA
GQQSGFALGSTIESKTKGIWMWCVPHPVKEEHTLVLLDTEGLGDVDKVDSKNDIWVFCLA
VLLSSTLVYNSRGTIDNQAIEKLHYVTELTSKIQVNCAGATNDEDPEDCEFVRFFPDFVW
AVRDFTLEMKRGDQDMSEDQYLEFALELKKGRNRKVSDYNLSRDCIRNFFPTRKCFAFPF
PMAANNMKHLNSMSEADLNPDFLKVTDRFCSSVFEEGRVKTTKGGHGVTGSRFSHLVKIY
VDTINSGSIPCLENAVVVMVKIENESAVNEGFELYEQGMENCSKNFPIDVGTLSAEHQRL
EAMAMQVFLKRSFKDTEEKYMTMLQERVAKLCDQLINKNMDASEKLCWKLLSDLYLPIAA
NIEKGIYAKTGGYAIYRHERDTMVAKYQQHGKKGMKGEEMLERFLQERSAEANSILMADQ
KLSEVEKQMAEARECEALQKQQVKVAEQHQQDLQRVREDEQRSQEERLRRMVEKMEEEKR
LQLEELERAMDCKLKEQKEMMEKGFRNQADIMNQEIEQLKKEKEMEMEKEAGPGIFEKYI
VPAAKIGATLLSTFLSYQIAPVFSDAH
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacggtccacccgccatggcagcgcctgtgtgcctgattgagaacacagaccag
ggcctgcagacggtggagtcgtccctcaacctcctgcggaggatccagcagcccgtggtg
gtggtggccgtggtggggctctaccgcaccggcaagtcctacctcatgaaccggctggcc
gggcagcagtcaggcttcgccctgggcagtaccatcgagtcgaagaccaaaggcatctgg
atgtggtgtgtaccccaccctgttaaagaagagcatacactggtgctgctagacacagaa
ggacttggtgatgtcgacaaggtggattcaaagaatgatatctgggtcttctgcctggct
gtgctgctcagtagcactctggtctacaacagcagaggcaccatcgacaaccaggccata
gagaaactgcattatgtgacggagctgaccagtaagatccaagtgaattgtgcaggtgcc
actaatgatgaggacccagaggactgtgagtttgtccgcttcttcccagactttgtctgg
gctgttcgggactttactcttgagatgaaacgcggtgatcaagacatgagtgaagaccag
tacctggaatttgccctggagttaaagaagggtcgaaatcgtaaggtctcagactacaac
ctgtcaagagactgcattcggaacttcttcccgacccggaagtgctttgccttcccgttc
ccgatggcggcaaacaacatgaaacatctgaactccatgtctgaggctgacctcaaccca
gactttctgaaagtcactgatcgtttttgcagttcagtctttgaagagggccgtgtgaag
accacaaagggaggtcatggggtcactggcagccggttcagccaccttgtgaagatctac
gtggacaccatcaacagtggcagcattccctgccttgagaatgcagtggttgtcatggta
aagattgagaatgagtcggctgtgaatgaggggttcgagctctatgagcagggcatggag
aactgtagcaagaacttccctattgatgttggaacactctcagcggaacatcaacgcctt
gaggccatggcaatgcaggttttcctgaaacgttccttcaaagacacagaggagaagtac
atgacaatgttgcaagagagagtggcaaagctatgtgatcagctgatcaataagaacatg
gatgcttctgaaaagctgtgttggaagcttctctctgatctctatctgccaatagccgcc
aacattgaaaagggaatctatgccaagacaggtgggtatgcaatctaccgccatgaacga
gacaccatggtggccaagtaccagcagcatggcaaaaagggcatgaagggggaggagatg
ttggagaggtttctccaggagaggagtgctgaggccaactccatcctgatggcagaccag
aaactctcagaggtcgaaaaacaaatggccgaggcccgagagtgtgaggcactgcagaag
cagcaggtcaaggtggcagagcagcatcaacaggacctgcagcgcgtccgggaggacgag
caacgcagccaggaggagcgcttgagacgcatggtggagaagatggaggaggagaaacgc
ctccaacttgaggagctggaacgtgccatggactgcaagctgaaggagcagaaggagatg
atggagaagggcttcaggaaccaggctgatatcatgaaccaggagatcgagcagctcaag
aaggagaaggaaatggagatggagaaggaggctgggccagggatctttgagaagtacatt
gtgcctgcagccaaaatcggtgcaaccctcctctccaccttcttgtcataccaaattgca
cctgtctttagtgatgctcactag
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