Sardina pilchardus (sardine): 134076449
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Entry
134076449 CDS
T10667
Symbol
taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134076449 (taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spil01002
]
134076449 (taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spil03021
]
134076449 (taf2)
03036 Chromosome and associated proteins [BR:
spil03036
]
134076449 (taf2)
Peptidases and inhibitors [BR:
spil01002
]
Metallo peptidases
Family M1
134076449 (taf2)
Transcription machinery [BR:
spil03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
134076449 (taf2)
Coactivators
SAGA/TFTC/STAGA complex
134076449 (taf2)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
134076449 (taf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
Peptidase_M1
Peptidase_M1_N
SR-25
Motif
Other DBs
NCBI-GeneID:
134076449
NCBI-ProteinID:
XP_062387500
LinkDB
All DBs
Position
3:5449188..5473495
Genome browser
AA seq
1229 aa
AA seq
DB search
MNRKKDKGFESPRPYKLTHQVVCINNINFQRKSVIGYVELTIFPTVVNLNRIKLNSKQCR
IYRVRVNDLESPFIYNDPTLEVCHHESKQRNLNYFSSAYTAAVSAVDPDAGNGELCIKVP
SELWKQGDEMKVLKVYIEFSLDQPKGGLHFVVPDVEGSMAERGAHVFSFGYQNSTRFWFP
CVDSYSELCTWKLEFTVDASMVAVSCGDLLETVYTHDMRKKTYHYMLPIPTAAPNISLAV
GPFEILVDPYMHEVTHFCLPQLLPLLKHTMSYLHEIFEFYEEILTCRYPYSCFKTVFVDE
AYVQVSSYASMSIFSTNLLHSAMIIDQTPLTRRCLAQALAQQFFGCFISRMSWADEWVLK
GISGYIYGLYLKKTFGVNEYRHWIKEELDRIVDYELKMGGVLLHPTFGGGKEKDNPTPHL
HFSIKHPHTLSWKYYKMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKYQSH
MWSQMLVSTSSFLKSISNVSGKDIGPLIKQWVDQSGVVKFFGSFAFNRKRNVLELEIRQD
YTSSGTQKYVGPIKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGEE
VDMDLSAMEPVSSSGKDRASCSYLELGADSPLLWIRIDPDMSILRKVEFEQADFMWQYQL
RYERDVVAQEESILALEKFPTPASRLALTDILEQEQCFYKVRMQACFCLAKIANSMMSTW
TGPPAMKSLFTRMFCCKSCPNIVKTNSFISFQSYFLQKTMPVSMALLRDVQNLCPKEVLN
FILDLIKYNDNRKNKFSDNYYRAELIDALTNSLTPAISINNEVRTMDNLNPDVRLILEEI
TRYLNMEKLLPSYRNTITVSCLRAIRTLQKNGHIPSDSSLFKAYAEFGHFVDVRIAALEA
LVDYTRVDRSSEELQWLLTMVQNDPTHYVKHKILSMLGKNPPFTKATESALCNEALVDQL
WKLMNSGTSHDWRLRCDAMNLYYTLFGLTRPSCLPLPELGLVLNLKEKKALLNPTIKPEQ
AVPAPELPPSISSMAFSVSIKAEEEHLVIDAPPIPVPPPSQALKRKLDTPLGSPPEPGQV
LQDELSAKIPMKGRFPTQEEEDIDMETVHDSQAFIYHHLNMLERPSTPGKEPPSVEQSLL
SMPATPMPMPMPVFSKESSSSSKHGGGSGGGEHHHHHHHHHEHKKKKKKHKHKHKHKHKH
DSKDKERDAHAFSNSPASGRSLRSPSLSD
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaagaaagacaagggtttcgagagtcctcgaccatacaaattaacccatcag
gtggtatgcataaacaacatcaatttccagaggaagtcagttattggatatgtggagctg
actatcttccccacggttgtgaatttaaaccgcatcaaactcaacagcaagcagtgtcgc
atatacagagtacgggtcaatgacttggagtctccattcatttacaatgaccccacctta
gaagtctgtcatcatgaatcaaagcagaggaacctcaactacttctccagtgcctacacg
gctgcggtcagtgcggtggacccagatgctgggaatggggagctctgcatcaaggtcccg
tccgagctctggaagcaaggagacgagatgaaggtgttgaaagtgtacattgagttctcg
ctggaccagcccaagggaggcctgcactttgttgtgcctgacgtggagggcagcatggca
gagcggggagcccacgtcttctccttcggctaccagaactccacacggttctggttcccg
tgcgtggactcgtactcggagctgtgcacgtggaagctggagttcacagtggacgcctcc
atggtcgccgtgtcctgcggagacctgctggagaccgtctacacccacgacatgcgcaag
aagacctaccattacatgctgcccatccccacagcggcccccaacatctccctggctgtt
ggaccatttgagattctggtggacccatacatgcatgaggtgacccacttctgcctgcct
cagctgcttcccctgctcaagcacaccatgtcctacctccacgagatctttgagttctac
gaggagatcctcacctgccgctacccctactcctgcttcaagactgtctttgtggacgag
gcctatgtgcaggtgtcctcctacgcgtccatgagcatcttcagtacgaatctcctgcac
agtgccatgattatcgaccagacccccctgacgcgccgctgcttggcccaggctctggcc
cagcagttctttggctgtttcatctcgcgcatgtcctgggccgatgagtgggttctgaag
gggatttctggctacatctacgggctgtacctgaagaagacctttggtgtgaacgagtac
cgccactggattaaggaggagttggacaggatcgtggactatgagcttaagatgggggga
gttctgctgcaccccacctttggaggagggaaagagaaggacaacccgacgcctcacctg
cacttctccatcaagcacccgcacacgctgtcctggaagtactacaagatgttccagtgc
aaagcccacctggtcatgcggctgatcgagaaccggatcagcatggagttcatgcttcag
gtcttcaacaaactgctgagcttagccagcaccgcctcgtcccagaagtaccagtctcac
atgtggagccagatgctggtgtcgacctccagcttcctcaagtccatctccaacgtgtct
ggcaaggacatcggtcctctcatcaagcaatgggtagaccagagcggggtggtgaagttc
tttgggagcttcgccttcaacaggaagaggaatgtgctggagctggaaattcgccaggat
tacacctcgtccggcacacagaaatacgtgggccccatcaaagtgacggtgcaggaactg
gatggctccttcaaccacaccctgcagatagaggagaacagtctgaagcatgacataccg
tgccactccaagagccgaagaaacaagaagaagaagattcctctgatgaacggagaggaa
gtggacatggacctctcagccatggaacccgtgagcagtagtggaaaggacagggccagc
tgcagctatctggagctaggcgccgactcgccgttgctgtggatccggatcgacccggac
atgtccatcctgcggaaggtggagttcgagcaggccgacttcatgtggcagtaccagctg
cggtacgagcgcgacgtggtggcccaggaggagtccatcctggccctggagaagttcccc
acgccggcctcgcgcctcgccctcaccgacatcctggagcaggagcagtgcttctacaaa
gtgcgcatgcaggcctgcttctgcctggccaagattgccaactccatgatgagcacgtgg
actggaccacctgccatgaaatccctcttcacccgcatgttctgctgcaagagctgccca
aacatcgtcaagaccaacagcttcatcagcttccagagctacttcttgcaaaagaccatg
ccagtttccatggctttgttgagagatgtgcagaatttatgccctaaagaagttctgaac
ttcatcctggacctcatcaagtacaacgataacaggaagaataagttctctgataactac
tacagggcggagttgattgacgccctcaccaactccctgactcctgccatcagcattaac
aacgaggtccgcacgatggacaacctcaacccagacgtgcgtctcatcctggaggagatc
acccgctacctcaacatggagaaactgctacccagctacaggaacacaatcaccgttagt
tgtctgcgagccattcgcacgttgcagaagaatggccacattcccagtgactccagcctc
ttcaaggcctacgcagagttcggccattttgttgatgtccgcatcgctgcactggaagct
cttgtggattacactcgagttgacagaagctcagaggaactccagtggctgctgaccatg
gtccagaatgaccccacacattatgtcaaacataagatcctaagcatgcttggtaagaac
ccaccgtttaccaaagcgactgagtctgcactctgcaacgaggcgcttgtggaccagctg
tggaagctcatgaactcaggcacctctcacgactggcggctgcgctgcgacgcgatgaac
ctgtactacacgctgttcggcctgacgcggccctcctgcctgcccctgccggagctgggc
ctggtgctcaacctgaaggagaagaaggccctgctcaaccccaccatcaagcccgagcag
gcggtgcccgcccccgagctgcccccctccatctcctccatggccttctcagtcagtatc
aaggcggaggaagagcatctggtcatcgatgctccacccatcccggtccctccacccagc
caggccctgaagaggaagctggacacgcccctggggtctccgccagagccggggcaggtg
ctgcaggacgagctgagcgctaagatccccatgaagggcaggtttcccacccaagaggag
gaggatatcgacatggagacagttcatgatagtcaggctttcatctatcatcacctgaac
atgctggaaagaccatctacaccaggaaaagagcctccgtcggtggagcagagcctgctc
tccatgcccgccacgcccatgcccatgcccatgcccgtgttcagcaaggagagcagctcg
tcgtccaagcacggcggcggcagtggcggcggcgagcaccaccaccaccaccaccaccac
cacgagcacaagaagaagaagaagaagcacaagcacaagcacaagcacaagcacaagcac
gacagcaaggacaaggagcgcgacgcgcacgccttcagcaacagcccggccagcggacgc
tccctccgctcgccctccctctccgactga
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integrated database retrieval system
