Sardina pilchardus (sardine): 134076617
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Entry
134076617 CDS
T10667
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04514
Cell adhesion molecule (CAM) interaction
spil04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134076617 (lrrc4ba)
04517 IgSF CAM signaling
134076617 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
spil04515
]
134076617 (lrrc4ba)
Cell adhesion molecules [BR:
spil04515
]
Immunoglobulin superfamily
NGL family
134076617 (lrrc4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
LRRNT
LRR_NXF1-5
LRR_At5g56370
VEGFR1-3_N_Ig-like
LRR_RPS2
Ig_6
POR_N
DUF4307
Motif
Other DBs
NCBI-GeneID:
134076617
NCBI-ProteinID:
XP_062387739
LinkDB
All DBs
Position
3:complement(10802754..10833863)
Genome browser
AA seq
743 aa
AA seq
DB search
MRITTVTGLSSPSPLLLLAQLLLWLLPFGPDTVGAASTNCPAPCQCSNQASRVICTRRNL
ADVPDSISVNTRYLNLQENSIKVIKSETFKNLRHLEILQLSKNQISQIEVGAFNGLPNLN
TLELFDNKLTQVPSAAFEYLSKLRELWLRNNPIETLPAYVFNRVPSLRRLDLGELKKLEH
ISEAAFVGLDNLRYLNLGMCGLKDIPNLTPLGRLEELELSGNRLEIVRPGSFQGLVSLRK
LWLMHSQMSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLPKLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPSLRGRYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTSTSMTSVNWFMPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGPYTCV
VSNTAGNTTATAMLNVTAAPSDNYTYFTTVTVETVDKDDEDLVNSSGSPALRTHNQTIIR
IPGPTPSWGLVPTTASSLSWSASSTRGAFTVPVTMDPTYSSLEDVMKTTKIIIGCFVAIT
FMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGASAGVRGSGISGGSTMSQGSG
GGGSQSLRLHHPEIVNLPNLARAEHLNHYYKAHHFNNNMLGLGMGGMGGMGGGMGLNNNN
NPSPCTQGMPTSMASSGAISCSPMPVSVGSGTATLGSLPTPVPLPQLSIHGSLKGLMGKG
QNSQIEPLLFKSGSKENVQETQI
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaccacggtgaccggcctttccagcccctccccccttctcctattggcccag
ctgcttttgtggctcctccccttcggcccggacacagtaggggccgcctccacaaactgt
cccgccccttgccaatgctccaatcaggcgagtcgagtgatctgtaccagacggaacctg
gctgacgtgccagacagtatatcagtgaacacgcgatacctcaacctgcaggagaactcg
ataaaggtgatcaaatctgagacgttcaagaacctccggcacctggagatcctccagctc
tctaaaaaccagatcagccagatcgaagtgggcgccttcaatggcctccccaacctcaac
acgctggagctgttcgacaacaagctcacgcaggtgccgtcggccgccttcgagtacctc
agcaagctccgcgagctctggctgcgcaacaaccccatcgagacgctgccggcgtacgtc
ttcaaccgcgtgccctcgctgcggcgcctcgacctgggcgagctcaagaagctcgagcac
atctcggaggcggcgttcgtgggcctggacaacctgcgctacctgaacctgggcatgtgc
ggcctcaaggacatccccaacctgacgccgctcggccgtctggaggagctggagctgtcg
ggcaaccggctggagatcgtgcggcccggctccttccagggcctggtgtcgctgcgcaag
ctgtggctcatgcactcgcagatgtcggtgatcgagcgcaacgccttcgacgacctgaag
aacctggaggagctcaacctgtcgcacaactcgctgcactcgctgccgcacgacctcttc
acgccgctgcccaagctggagcgcgtgcacctcaaccacaacccgtgggtgtgcaactgc
gacgtgctctggctcagctggtggctgaaggagacggtgcccagcaacaccacctgctgc
gcccgctgccacgcgcccccctcgctgcgcggccgctacatcggcgagctggaccagagc
cacttcacgtgctacgcgccggtcatcgtggagccgccgaccgacctgaacgtgacggag
ggcatggcggccgagctcaagtgccgcaccagcacgtccatgacgtcggtcaactggttc
atgcccaacggcacgctcatgacgcacggctcgtaccgagtgcgtatctcggtgctccac
gacggcacgctcaacttcaccaacgtgacgctgcgcgacacggggccgtacacgtgcgtg
gtgagcaacacggcgggcaacaccaccgccacggccatgctcaacgtcacggccgcgccc
agcgacaactacacctacttcaccaccgtcaccgtggagacggtggacaaggacgacgag
gacctggtcaactcgtccggctcgccggcgctgcgcacccacaaccagaccatcatccgc
atcccgggccccacgccctcctggggcctggtgcccaccaccgcctcctcgctctcgtgg
tcggcgtcgtccacgcgcggcgccttcaccgtgcccgtgaccatggacccgacgtactcg
agcctggaggacgtgatgaagaccaccaagatcatcatcggctgcttcgtggccatcacc
ttcatggcggccgtcatgctggtggtcttctacaagctgcgcaagcagcaccagctgcac
aagcaccacggccctgcgcgcgccatcgagatcatcaacgtcgaggacgagctgggcgcc
agcgccggcgtcaggggcagcggcatctccggcggctccaccatgagccagggctccgga
ggaggaggaagccagagcctgcggctgcaccacccggagatcgtcaacctgcccaacctg
gcgcgcgccgagcacctcaaccactactacaaggcgcaccacttcaacaacaacatgctg
ggcctgggcatgggcggcatgggcggcatgggcggcggcatgggcctcaacaacaacaac
aacccctcgccctgcacccaggggatgcccacgtcgatggccagctccggcgccatctcc
tgctcgcccatgcccgtgtcggtgggcagcggcacggccacgctgggctcgctgcccacg
ccggtgcccctgccccagctgagcatccacggctcgctcaagggcctgatgggcaaaggg
cagaactctcagatcgagcccctgctcttcaagagcggctccaaggagaacgtgcaagag
actcagatctga
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