Sardina pilchardus (sardine): 134077054
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Entry
134077054 CDS
T10667
Symbol
utp18
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134077054 (utp18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spil03009
]
134077054 (utp18)
Ribosome biogenesis [BR:
spil03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
134077054 (utp18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
EIF3I
Beta-prop_TEP1_2nd
NBCH_WD40
WD40_RFWD3
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_Vps41
DUF7165
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
KNTC1_N
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Pox_D5
Motif
Other DBs
NCBI-GeneID:
134077054
NCBI-ProteinID:
XP_062388409
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Position
3:complement(21891724..21900141)
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AA seq
518 aa
AA seq
DB search
MATLLPHIRKGRKRGPDPVVDLDEEANKREKNVQLLRVLGEQDASVKLLEDLVFGTEDEL
VERLEHEAGDMRGSLLDEEDSSDDETENESRLQVPAAKKAVWEDDDDEVAEEVDMAHRFR
TDFTKGSAEARMTKQKLQQRLKEQFQKSMGGAPSWAETEVRKKKKKEEEEEDEDDEDNLM
RKTGNFVGTSESLPKGIIRIKKCLKANNDRPADDRLTTVQFHPSAQVIMTAGLDHSISLF
QVDGKTNPKIQSIHLERFPVNKACFSANGEQVIATGMRNKLFYIYDMMEGKIIPVPTVRG
LTEQRVKEFEVSPEGDYLLLTGSSGYLHLMTMKTKEVIRSMKVSGNVCGTAFSADGSKIF
SMSEEGEVFIWDVRSSKCLSRFPDEGCVRGTSIALSPDGHYLACGSQSGVVNVYSQQACV
REAEPKPLKAVMNLVTAATALRFNPTSEILAIASRADDEANRLVHLPSLTVFSNFPVFRR
KTIYRTHCLDFSPNSGFYSVANNKGDALLFRLLHYKDF
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcaacactcttgcctcacatcagaaaaggcaggaaaagaggcccagacccggtagtg
gacttggacgaagaagcaaataaaagagaaaagaacgttcaattgctgagagtcctgggc
gagcaagatgcatccgtcaaactgctggaggatctcgtctttggtacagaggacgagctg
gtggaaagattggagcatgaagcaggtgacatgaggggtagcttactggacgaggaggat
tccagcgatgatgagactgaaaacgaatcaaggcttcaggtcccggcagcgaagaaagct
gtgtgggaggatgacgatgatgaagttgcggaagaggtggacatggctcaccggttccgc
acggacttcaccaaaggcagcgcagaggccagaatgaccaaacagaagctacaacagcgg
ctaaaagaacagttccaaaagtctatgggtggagccccctcctgggcagagacggaagtg
aggaagaagaaaaagaaagaggaggaagaggaagatgaggacgacgaagacaatttgatg
cgcaagacgggcaactttgtggggacgtctgaaagtctccccaagggaattataaggatc
aagaagtgcctgaaggccaacaatgaccgacctgcagatgaccgcttgaccactgtccag
tttcacccctcagctcaggttatcatgaccgcaggattggaccattccatctctctcttt
caggtggacggtaagaccaacccaaagatccagagcatccacctggagaggtttccggtg
aacaaggcctgcttcagcgccaacggagagcaggtgattgccacgggcatgaggaacaag
ctcttctacatctacgacatgatggagggcaagatcatccccgtccccaccgtcagaggg
ttgactgaacagagggtgaaggagtttgaggtttctcctgagggggactatctcctcctc
accggctcctcaggatatctccacctcatgaccatgaagactaaggaggtcatcaggagc
atgaaggtcagtgggaacgtgtgtgggacggccttctccgcagacggcagcaagatcttc
tccatgtctgaggagggcgaggtgttcatctgggacgtgaggagcagtaagtgcctgagc
cgtttccctgacgagggctgcgtgaggggcacctccatcgccctctcacctgacggacac
tacctggcctgcgggtcccagtctggcgtggtgaacgtgtactcccagcaggcgtgtgtg
cgggaggcggagcctaagcccctgaaggccgtcatgaacctggtgacggccgccaccgcg
ctgcgcttcaaccccacctccgagatcctcgccatcgcatcccgcgccgacgacgaggcc
aaccgactggtccatcttcccagtttgacggttttctccaacttccccgtgttccggcgg
aagaccatctaccgcacgcactgtctggacttctcccccaacagcgggttctactccgtg
gccaacaacaagggcgacgccctgctcttcaggttactgcactataaggacttctga
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