Sardina pilchardus (sardine): 134077060
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Entry
134077060 CDS
T10667
Name
(RefSeq) integrin alpha-X-like
KO
K06461
integrin alpha M
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04145
Phagosome
spil04514
Cell adhesion molecule (CAM) interaction
spil04517
IgSF CAM signaling
spil04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134077060
04517 IgSF CAM signaling
134077060
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
134077060
09142 Cell motility
04810 Regulation of actin cytoskeleton
134077060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134077060
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spil04147
]
134077060
04515 Cell adhesion molecules [BR:
spil04515
]
134077060
04090 CD molecules [BR:
spil04090
]
134077060
00536 Glycosaminoglycan binding proteins [BR:
spil00536
]
134077060
Membrane trafficking [BR:
spil04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
134077060
Exosome [BR:
spil04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134077060
Cell adhesion molecules [BR:
spil04515
]
Integrins
Integrin alpha subunits
134077060
CD molecules [BR:
spil04090
]
Proteins
134077060
Glycosaminoglycan binding proteins [BR:
spil00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
134077060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
VWA_2
FG-GAP_3
TMP_N
CCDC142
Motif
Other DBs
NCBI-GeneID:
134077060
NCBI-ProteinID:
XP_062388429
LinkDB
All DBs
Position
3:complement(21540510..21587950)
Genome browser
AA seq
1138 aa
AA seq
DB search
MSALMLALVFISVFQIAACFNIESTSWRHIHQSAEGFGYRLIQDTASRLLVSAPLEQHGV
DRRGRVYQCQVSSSSCSPLQISVPSHGLNMSLGLSMSKTELSTKTIVCGPTIPKECDNIN
LYGGMCFSIGPSLQQGGPVPASLQDCKAIDIAFLLDGSGSVNWMQFNTMKTFVKGLTTRL
LHQNTRFALAQYSSGCTIHLKFNMFERATWKLQVDSIIQQQGGTYTAGAIKTVVNSVFDA
SAGARPDATRILIVITDGESHDAQYYPTVTRLADAKNIFRYAIGVGDAFSSHSAQNELRS
IASSPTSEHMFKVDSFEALDKISSTLEESIIAIEGTQTTGDATTMEFAQNGFSAALVSDE
RFLVGVVGANEWRGGYQDIHLSSGEPSFTRVDQITANSYLGYSMAIARSRVKDYIVMGAP
RYEHKGLLMVFSPGNTQPKMFTQSQIGAYFGAEVCVVDLDGDSNTDLILASAPMHTEGER
EGKVFVYSISSQRYYGFQASVLDTGVSLLGLEGQRGRFGSSLASLADLNGDGIRDVAVGA
PLEDNGQGSVYIFNGRKRGINPTYSQRIVGSSVRSGLQFFGLTVAQSALDQSGDGLPDIA
VGSKGAVLLLRSRPVVTITTSVTFEPSKIPKSIYDCTSPQQNNASVCFSMTKVTQDSLKG
LQAKLNYTLSLDFVRQNSRAFFTAGGKDRSENKEVTVSLRKNCFKHSFFVLCSPEDVVNP
VDVQVAFSFQGLPIPSADQLTPTLSISSPNTTDHQLNFEIDCGEDKKCIDQIHINFEFSG
SIIEVGITQEMSVRVTVENRGENSYDPRVFLFYPPGLSYRTFTKSQGRVECTSLDSTDGV
TLGQTDCSINRPILRAGEKADFVVQYGIGESSRFGDRITMQAQASSDSEHDPSSQLYKRL
DIGVKYSIYVILKSFEGTTNYINFTAGDNHLQKPVIQELEVTNKIRGLNLTVVIHVPIRL
QDKDIWTNVGSLQIQGCSKGLERSPNIKDLKHFFKDNKEPDVNCSIAVCLEFRCNSYMMR
DDQNHYRISGNVSSEWIEQTGLRSALFHLVSSATLEYDDGKYIFFSTDSSHQAPVSKIET
LVEVYDEPDLTKEIIGGVVGGLILLALMTAGLAKSGFFKSQYQQKLEEAQGEEAPAGE
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctctaatgttagcgcttgtcttcatctcagtgtttcagatagcggcatgcttc
aacatcgagtctacttcttggagacacatccaccaatcagcagagggctttggctacaga
ctgatccaggacaccgcatcacgtctgttagtgagtgcccctctagagcagcatggtgtg
gataggagaggacgggtttaccaatgccaggtctcatccagctcctgctcaccactacaa
ataagtgttccttcgcatggattgaacatgtctcttggcctttccatgagcaagacagag
ttatctacaaagacaatagtttgtggtccaaccatcccaaaagagtgtgataacatcaat
ctctatggtgggatgtgtttcagcattggaccgtctcttcaacaaggaggacctgtgcca
gcatctcttcaagactgcaaggctatagatattgcattcttgctggatgggtctgggagt
gttaattggatgcagttcaacaccatgaagacatttgtgaaaggcctaaccacaagactt
ctgcatcaaaacacgaggtttgccttggcacagtactccagtggatgcaccatccacctg
aaattcaatatgtttgagagagcaacatggaaacttcaggtggacagtatcatacagcaa
caaggaggcacttatacagctggtgccatcaagacagttgtgaattctgtatttgatgcg
tctgctggagcgagacctgatgctacaaggatcctcattgtcatcacagatggggagtca
catgatgcccaatattatcccactgttacaagattggctgacgctaaaaatatttttaga
tacgctattggggttggcgacgcctttagcagtcactcagcacaaaatgagcttaggagc
atcgcatcctctcccacatcagagcacatgtttaaagtggacagctttgaggctctggac
aaaatcagcagcacactggaggagagcatcattgccatagaaggaacccaaaccacaggt
gatgccacaacaatggaatttgcccagaatggattcagcgcagctcttgtgtcggatgaa
cggtttctagtgggtgtggtcggggcaaatgaatggagaggaggttatcaggacatccat
ctgtccagcggggagcccagctttaccagggtggatcagatcacggctaacagctatctg
ggctactccatggctatagcccgctcaagagtaaaggactacatagttatgggggccccc
aggtatgaacacaaggggctactcatggtcttctctcctggaaacacgcaaccaaagatg
ttcacacagtctcagatcggggcctactttggagcagaggtgtgtgtggtggatttggac
ggagactccaacactgatctgattctggcatctgcccccatgcacacagagggagagaga
gaggggaaagtgtttgtgtacagcatatcatctcagcgctactacggcttccaagccagt
gtgctggacactggcgtgtccctgctggggctggagggtcagagggggaggtttggctcg
tctctggccagcctggctgacctgaacggggacgggatcagggacgtggccgtgggagct
cctctggaggataacggacagggcagcgtgtacatcttcaacgggaggaaaagaggaatc
aaccccacctactcacagaggattgtgggttcgtcggtgcggtccggtctgcagttcttt
gggctgaccgtggcccagtctgctttggaccagagtggagacggactgcctgacatcgca
gtcgggtccaaaggagcggttctgctgctgaggtcgaggcctgttgttactataaccaca
agtgttacatttgaaccatccaaaatccccaaatccatctacgactgtacgagtcctcag
cagaataacgccagtgtatgcttcagcatgactaaggtcactcaagatagcttgaaagga
ctgcaggcaaaactcaactacacactgagcctagattttgtccgtcaaaattcccgagcc
ttctttacagctggagggaaagacaggagtgagaacaaagaagtcacagtgtctttaaga
aaaaattgtttcaaacactctttctttgtactgtgctccccagaggatgttgtgaatcct
gtggacgtccaggtggccttctccttccaggggcttcctatcccgtctgcagaccagctg
accccaacgctgtccatcagctcccccaacaccacagaccaccagttaaactttgaaatt
gactgtggagaggacaaaaagtgtatagatcaaatccatatcaactttgaattctctgga
tccatcatcgaggtaggcatcacacaggagatgagtgtgagagtcacggtggagaataga
ggagagaactcctacgacccccgtgtgtttcttttctaccctcctggcctctcctacagg
accttcaccaagagccagggcagggtggagtgcacttctctagacagcacagatggagtc
accttgggacagactgactgcagcatcaacagacccatcttgcgggctggagagaaggct
gattttgttgttcagtatggaattggtgaaagcagccgttttggtgacaggatcaccatg
caggcccaggcttcaagtgacagtgaacatgatcccagtagccagctgtacaaacgtctg
gacattggggtcaaatacagcatttatgtaattctgaagagttttgaaggaaccaccaat
tacattaatttcactgcaggagataatcacttgcaaaaaccagtgatacaagaattagag
gtgactaataaaatcagaggactcaatctgactgttgttattcatgttccaataagactc
caagacaaagatatctggaccaatgtgggcagtttgcaaatccagggatgctctaaaggg
cttgagaggagtccaaacatcaaagacctgaaacatttcttcaaggacaacaaggagcct
gatgtgaactgctccattgccgtgtgtctggagttcaggtgtaactcctacatgatgaga
gacgaccaaaaccactacagaatctcagggaacgtgagctcggagtggattgagcagact
ggactgcgttctgctctgtttcacttggtcagctcggccacactggagtatgatgacggc
aagtacatcttcttctccacagactcttctcaccaggcaccagtctccaagattgagact
ctagtggaggtctatgatgagccagacctaactaaggagatcattggtggagtggtggga
ggccttatcctattggctctcatgactgctggcctcgccaagtcgggcttcttcaagagt
cagtatcagcagaaactagaggaagcccaaggagaggaggcaccagcaggagaataa
DBGET
integrated database retrieval system
