Sardina pilchardus (sardine): 134077086
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Entry
134077086 CDS
T10667
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03013
Nucleocytoplasmic transport
spil03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134077086
03015 mRNA surveillance pathway
134077086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spil03019
]
134077086
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
134077086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Nup35_RRM_2
RRM_occluded
RRM_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
134077086
NCBI-ProteinID:
XP_062388460
LinkDB
All DBs
Position
3:complement(23130049..23135748)
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AA seq
280 aa
AA seq
DB search
MAPSPTKRKERSEDKTKERGKEKSGTKEGTDKDRGRDKTRKRRSASTGSSSSRSSSSSSS
SSGSSSGSSSGSSSSSGSSRSGSSSRSSSSSSSSSGSPSPGRRRHDNRRRSRSKSQKRGE
EKERKKRSPSPKPTKIHVGRLTRNVTKDHIQEIFATYGKIKNVEMPTDRFHPHQSRGYAY
VEYETPEEAQKALKYMDGGQIDGQEITAIAILTQRTRPPPRRASPPRRMPPPPPMWRRTP
PRMRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgtcacctacaaaaaggaaagagcggtctgaggataaaacgaaggagcgaggc
aaagagaagtctggaaccaaggaaggaacagataaagaccgcggccgagacaagacgcgc
aaacgtcgcagtgcatccacaggaagtagcagcagcaggtccagctcgtcttccagcagc
agctccggttctagctccggttcctccagtggatccagctcctcgtccggttccagccgc
tccggttcctcctcccgctcttcctcctcctcatcctcttcatcggggtctcctagtccc
ggccgcaggaggcacgataaccgccgcaggtctcgttcaaagtcacagaaacgaggggag
gagaaggagaggaagaagagatctccgagccccaaacccaccaaaattcacgtcggacga
ctcacccgtaacgttaccaaggaccacattcaggagatcttcgcgacttacggcaagata
aagaatgtggagatgcccacggacagattccacccgcaccagtctcgaggctacgcctac
gtggagtatgaaacgccagaggaggcgcagaaagccctcaagtacatggatggaggtcag
attgatggtcaggagatcaccgccatcgccatattgacccagcgcactcgcccgccccca
cgccgcgcctcgcccccccgcaggatgcctccgcccccccccatgtggcgccgcacccct
ccccgcatgaggagaaggtctcggtcaccacggagacggtcacctgtccgccggcgttcc
cgctccaggtccccgggccgcaggcgccaccgctcccgctccagctccaactcctcccgc
tag
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