Sardina pilchardus (sardine): 134077411
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Entry
134077411 CDS
T10667
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04137
Mitophagy - animal
spil04144
Endocytosis
spil04145
Phagosome
spil04148
Efferocytosis
spil05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134077411 (rab5c)
04145 Phagosome
134077411 (rab5c)
04137 Mitophagy - animal
134077411 (rab5c)
04148 Efferocytosis
134077411 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134077411 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134077411 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spil04147
]
134077411 (rab5c)
04031 GTP-binding proteins [BR:
spil04031
]
134077411 (rab5c)
Membrane trafficking [BR:
spil04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
134077411 (rab5c)
Endosome - Lysosome transport
134077411 (rab5c)
Exosome [BR:
spil04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134077411 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
134077411 (rab5c)
Exosomal proteins of colorectal cancer cells
134077411 (rab5c)
Exosomal proteins of bladder cancer cells
134077411 (rab5c)
GTP-binding proteins [BR:
spil04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
134077411 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
MCR_beta
AAA_16
BrnT_toxin
Motif
Other DBs
NCBI-GeneID:
134077411
NCBI-ProteinID:
XP_062388984
LinkDB
All DBs
Position
3:complement(34319002..34333393)
Genome browser
AA seq
220 aa
AA seq
DB search
MAGRGGPARTNGAAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGGAGAGGRARGGVDLQEAAPQSRSGQCCSSGN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcgcggaggaccagcacggaccaatggggcagccgcaggcaacaagatctgt
cagttcaagctggtgctactaggggagtcggcggtgggcaaatccagcctggtgctgcgc
tttgtcaaaggacagttccacgagtaccaggagagcaccatcggagctgcgtttctcaca
cagactgtttgtttggatgacacaacagtaaagtttgagatttgggacacggcagggcag
gagcgctaccacagtctggcccccatgtactacagaggagcgcaagcagccatcgtagtc
tacgacatcaccaacacagacacattcacccgtgcaaagaactgggtgaaggagctgcag
agacaggctagtcccaacatagtcatcgccctggcggggaacaaggccgacctcgctaac
aagagagccgtagatttccaggaagcacaagcctatgcagacgacaatagcctgctcttc
atggaaacttctgcaaaaactgcaatgaacgtcaatgagattttcatggccatagcaaag
aaactgccgaagaatgaaccacagggcggcgctggagctggcggacgcgccaggggcgga
gtcgaccttcaggaggcggcccctcagagcagaagtggccaatgctgcagcagtgggaac
taa
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integrated database retrieval system