KEGG   Sardina pilchardus (sardine): 134077411
Entry
134077411         CDS       T10667                                 
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil04137  Mitophagy - animal
spil04144  Endocytosis
spil04145  Phagosome
spil04148  Efferocytosis
spil05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:spil00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    134077411 (rab5c)
   04145 Phagosome
    134077411 (rab5c)
   04137 Mitophagy - animal
    134077411 (rab5c)
   04148 Efferocytosis
    134077411 (rab5c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    134077411 (rab5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:spil04131]
    134077411 (rab5c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spil04147]
    134077411 (rab5c)
   04031 GTP-binding proteins [BR:spil04031]
    134077411 (rab5c)
Membrane trafficking [BR:spil04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    134077411 (rab5c)
 Endosome - Lysosome transport
    134077411 (rab5c)
Exosome [BR:spil04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   134077411 (rab5c)
  Exosomal proteins of other body fluids (saliva and urine)
   134077411 (rab5c)
  Exosomal proteins of colorectal cancer cells
   134077411 (rab5c)
  Exosomal proteins of bladder cancer cells
   134077411 (rab5c)
GTP-binding proteins [BR:spil04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    134077411 (rab5c)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase MCR_beta AAA_16 BrnT_toxin
Other DBs
NCBI-GeneID: 134077411
NCBI-ProteinID: XP_062388984
LinkDB
Position
3:complement(34319002..34333393)
AA seq 220 aa
MAGRGGPARTNGAAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGGAGAGGRARGGVDLQEAAPQSRSGQCCSSGN
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcgggtcgcggaggaccagcacggaccaatggggcagccgcaggcaacaagatctgt
cagttcaagctggtgctactaggggagtcggcggtgggcaaatccagcctggtgctgcgc
tttgtcaaaggacagttccacgagtaccaggagagcaccatcggagctgcgtttctcaca
cagactgtttgtttggatgacacaacagtaaagtttgagatttgggacacggcagggcag
gagcgctaccacagtctggcccccatgtactacagaggagcgcaagcagccatcgtagtc
tacgacatcaccaacacagacacattcacccgtgcaaagaactgggtgaaggagctgcag
agacaggctagtcccaacatagtcatcgccctggcggggaacaaggccgacctcgctaac
aagagagccgtagatttccaggaagcacaagcctatgcagacgacaatagcctgctcttc
atggaaacttctgcaaaaactgcaatgaacgtcaatgagattttcatggccatagcaaag
aaactgccgaagaatgaaccacagggcggcgctggagctggcggacgcgccaggggcgga
gtcgaccttcaggaggcggcccctcagagcagaagtggccaatgctgcagcagtgggaac
taa

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