Sardina pilchardus (sardine): 134077471
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Entry
134077471 CDS
T10667
Symbol
ddx42
Name
(RefSeq) ATP-dependent RNA helicase DDX42 isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03040
Spliceosome
Brite
Enzymes [BR:
spil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134077471 (ddx42)
Spliceosome [BR:
spil03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
134077471 (ddx42)
Complex B
134077471 (ddx42)
Complex C
U2 SnRNP specific factors
134077471 (ddx42)
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Other DBs
NCBI-GeneID:
134077471
NCBI-ProteinID:
XP_062389084
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Position
3:complement(36223535..36235231)
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AA seq
926 aa
AA seq
DB search
MNWNKGGPAGKRGFGFGGFSLAGGKKEDPLPQPSHNSFGASGSAGGYGKNQQLPAFYKIG
TKRANFDEENAYFEDDEEEASTNDLPYIPAENSPTRKQFQSGGGHGSDSDDDPLDAFMAE
VENQAAKDMKKLEEKEKKTAKGIRDDIEEEDDQEAYFRYMAENPTAGLTQEEEEENIDYD
SDGNPIAPTTKKIILPLPPIDHTEIDYPPFEKNFYQEHEELNILTGTQVVDLRQKLNLRV
SGAAPPKPCTSFAHFSFDEQLMHTIRKSEFTQPTPIQCQGLPIALSGRDMIGIAKTGSGK
TAAFIWPMLVHIMDQKELQPGDGPIAIIVCPTRELCQQIHSECKRFGKAYGLRSVAVYGG
GSMWEQAKALQDGAEIVVCTPGRLIDHVKKKATSLQRVTYLVFDEADRMFDMGFEYQVRS
VASHVRPDRQTLLFSATFRKKIERLARDILVDPIRVVQGDIGEANEDVTQLVEVMPAGVD
KWGWLTRRLVEFTSAGSVLIFVTKKANCEELATNLTQEGYSLGLLHGDMDQSERNKVIAD
FKKKSLPVLVATDVAARGLDIPSIRTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLLT
NKDTSFAGDLVRNLEGANQSVSKDLMDLAMQNSWFRKSRFKGGKGKKINIGGGGLGYRER
PGLGADTSERSAGASGASALGNYEPFKPATGGAMGDRMSAMKQAFQSQYKNHFVAASGHV
PKLSTKASSTSGWTSAGSLSSVPSGNPEGLDRPTAAPPVAAFAAMPPPPPALSIGTKLAG
FASAGSLSCVPDSPRGDRYEEERSRHSDRSSGGGERERDRERDRERERDRDRERHSDRAD
RHGDHRERDRHGDRDRERHSDSRNGGGGSGRRERDGRSEREEREDREEREEREDREERED
REEREERGAGFAVPDLPRRKKSRWDN
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaataagggaggcccagcggggaagcgaggctttggatttggtggcttctct
ctggccggagggaagaaagaagatcctctgccgcagccatcacacaactcgtttggagct
tcagggtcagctggaggttatggcaagaatcagcagctcccagccttctacaaaataggc
actaaaagagccaacttcgacgaggagaatgcatattttgaggatgatgaagaggaggca
agcaccaatgacctgccctacatcccagctgagaactccccaacccgaaaacagttccag
tctggagggggacatggctcagacagtgacgatgatccactggatgccttcatggcggag
gttgagaatcaagcagctaaggatatgaagaaattggaggaaaaggagaaaaagactgcc
aagggtatacgagatgacattgaagaggaagatgaccaagaggcctatttccgctacatg
gccgagaaccccacggccggcctgacccaggaggaggaggaggagaacatcgattacgac
agcgacggcaatcccatcgctcccaccaccaagaagatcatcttgcctcttcccccgatc
gaccacactgagattgactaccctccctttgagaagaatttctatcaggagcacgaagag
ctcaacattctgacgggaacacaggtggtggatctcagacagaaactcaacctcagggtg
tctggagcggcgccccctaaaccttgcacaagctttgcccacttcagttttgacgagcag
cttatgcacacgatccgcaaatcggaattcacgcagcccacacccatccagtgccagggt
ctgcccattgccctgagtggccgagacatgatcggcatcgccaagaccggcagcggcaag
acggcggccttcatctggcccatgctggtgcacatcatggaccagaaggagctgcagccg
ggagacgggcccatcgccatcatcgtgtgccccaccagagagctctgtcagcagatccac
tctgagtgcaagcgctttgggaaggcgtacggtctgcgctccgtggccgtgtacggagga
ggcagcatgtgggagcaggccaaggccctgcaggatggagccgagatcgtggtgtgcact
ccgggtcgcctcattgatcacgtgaagaagaaggccacgtcgttgcagagggtcacctac
ctggtgtttgatgaggccgaccgcatgtttgacatgggctttgagtatcaggttagatcc
gtcgccagccacgtccggccagacagacaaaccctgttgttcagtgccacattccgtaag
aagattgagaggctggcaagagatatcctggtcgaccccatccgtgtcgtgcagggagac
attggagaggccaacgaggacgtgacccagctggtggaggtgatgccggcgggcgtggac
aagtggggctggctgacgcggcggctggtggagttcacctcggccggctccgtgctcatc
ttcgtcaccaagaaggccaactgcgaggagctggccaccaacctgacgcaggagggctac
tcgctgggcctgctgcacggcgacatggaccagagcgagaggaacaaggtcatcgccgac
ttcaagaagaagagcctgcccgtgctggtggccaccgacgtggcagcccgtggtctggac
attccatccatccgcactgtggtcaactacgacgtggctcgtgacatcgacacgcacaca
cacaggattggtcgaacaggtcgtgctggagaaaagggtgtggcctacacccttctcacc
aataaagacacctcatttgctggagaccttgttcgtaacctggagggagccaaccaaagt
gtctcaaaggaccttatggaccttgccatgcagaattcttggttcaggaagtcccgcttt
aagggaggcaaagggaagaagatcaacattggcggcggaggcctggggtacagagagaga
ccaggcttaggagcagacacttcggagcgtagtgctggtgcaagtggagcctctgccctt
gggaactacgagcctttcaagcccgccacaggaggagccatgggagaccgcatgtcagcc
atgaaacaggctttccagtcccagtataagaaccactttgtggctgcgtcaggccacgtt
cccaagctctccaccaaagccagcagcacgtcgggttggaccagcgccgggagcctgagc
tcggtgcccagtgggaaccccgagggcctggaccgacccaccgcggcacctccggtggca
gcctttgccgccatgccccctccgccgccagctcttagcattggcaccaagttggcgggt
ttcgccagcgccggttccctgagctgcgtgcccgacagcccccgtggtgatcgctacgaa
gaggagcgcagtcgccacagcgaccgcagctcaggcggaggagagcgggagcgggaccgc
gagcgagatcgggaacgggaacgagaccgcgatcgcgagcgccacagcgaccgcgccgac
cgccacggcgaccaccgtgaacgcgaccgccacggagaccgggaccgcgagcgccacagc
gacagccggaacggcggcggcggcagcggccgaagggagagggacggacgctcggaacgg
gaggagcgcgaggatcgtgaggagcgcgaggagcgtgaggatcgggaggagcgtgaggat
cgcgaggagcgtgaggagcgcggggccggcttcgccgtcccagacctgccccggcgcaag
aagagccgatgggacaactga
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