Sardina pilchardus (sardine): 134077484
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Entry
134077484 CDS
T10667
Symbol
rhot1a
Name
(RefSeq) mitochondrial Rho GTPase 1-A isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
134077484 (rhot1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
spil03029
]
134077484 (rhot1a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
spil04031
]
134077484 (rhot1a)
Mitochondrial biogenesis [BR:
spil03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
134077484 (rhot1a)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
134077484 (rhot1a)
GTP-binding proteins [BR:
spil04031
]
Small (monomeric) G-proteins
Rho Family
Miro
134077484 (rhot1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_6
Arf
EF-hand_7
EF-hand_1
MMR_HSR1
AAA
EF-hand_8
AAA_22
RsgA_GTPase
AAA_25
Motif
Other DBs
NCBI-GeneID:
134077484
NCBI-ProteinID:
XP_062389103
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All DBs
Position
3:36807434..36826780
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AA seq
706 aa
AA seq
DB search
MRKDVRILLVGEPKVGKTSLIMSLVSEEFPDEVPLRAEEITIPADVTPERVPTHIVDYSE
AEQSEEQLYQEISKANVICIVYSVNNKKSIEKVTSHWIPLINDRTDKDSRVPLILVGNKS
DLVEHSSMETILPIMNQYSEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKE
MKPSCIKSLTRIFKVSDLDNDGVLNDNELNFFQRTCFNIPLAAQALEDVKNVVRKNITDG
VKDNGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELTQEYLFPLLKIPPDCTTE
LNHNAYLFLQGVFDKHDKDRDCALSPDELKDLFKVFPYMPWGPDVNNTVCTNEQGWITYQ
GYLSQWTLTTYLDVQRCLEYLGYLGYSIINEQESQAASITVTRNKRIDLQKKQTQRSVFR
CNVLGAHNSGKSGFLQAFLERNLVRQRKMKDDHKSYYAMNTTYVYGQEKYLLLHEVSPDL
DFLSDTDLACDVVCLIYDVSNPRSFEYCAKAYKRYFMDSKTPCMIIAAKSDLHEVRQQST
LPPLDFCRKHRLHPPQPFTCNSTDAPSKDIYTKLTTMAMYPHAKLRCMCACNRCTFCVSH
NLLNSELVRSIKATLYTALLNRLRPYVEHLGACLLADEDSSLIHQVHEVTYVEESIYMES
SVDPFTSRHMTQADLKNSTFWLRASLGATVFAVLGFAMYKAILKQR
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggacgtccggatattgctggttggtgaacccaaagtggggaagacatcactg
atcatgtcgttggtcagtgaggagttccctgacgaggttcccctgcgtgccgaagagatc
accattccagcagatgtcacaccagaaagagtgcccacacacatagtggactattcagaa
gcggagcagtcagaagaacagttataccaagaaatttccaaggctaatgtaatatgcatc
gtctattctgtcaacaacaagaagtctattgagaaggtgacaagccactggattcctctc
atcaacgacagaacggacaaagacagcagggtgccgctgatcctggtggggaacaagtcg
gacctggtggagcacagcagcatggagaccatcctgcccatcatgaaccaatactctgag
atcgagacctgcgtggagtgttcagccaagaacctgaagaacatttcggagttgttctac
tatgcccagaaggctgtgctgcaccccacgggacccctctactgtcctgaggagaaggag
atgaagccgtcgtgcatcaaatccctcacgcgcattttcaaagtgtccgacctcgacaac
gacggagttctcaacgacaacgagctcaacttcttccagaggacgtgtttcaacatccct
ctggccgctcaggctctggaggacgtcaagaacgtggtgaggaagaacatcacggacggc
gtgaaggacaacggcctcacgctcaaaggtttcctgttcctgcacacactcttcatccag
aggggccggcacgagaccacctggactgtcctgcggcgcttcggctacgacgacgacctg
gagctcacgcaggagtacctgtttccactgctgaagatcccgccagactgcaccacagag
ctgaaccacaatgcgtacctcttcctgcagggggtctttgacaagcatgacaaagaccgg
gactgtgctctgtcccctgatgagctgaaggacctgttcaaagtcttcccctacatgccc
tggggccctgatgtcaacaacactgtctgcaccaacgagcagggctggatcacctaccag
ggatacctatcacagtggacgctaacgacgtacctggatgtgcagaggtgtcttgagtac
ctgggctacctgggctattccatcattaacgaacaggagtctcaagcagcatctatcaca
gtgacgcgcaacaagcgcatcgacctgcagaagaagcagacgcagcgcagcgtgttccgc
tgcaacgtgctgggagcgcacaacagcggcaagagcggctttctgcaggctttcctggag
aggaaccttgtgcgacagcggaagatgaaagatgatcacaagtcctactacgccatgaac
accacctacgtctacggccaggagaagtacctgctgcttcatgaggtgtctccggacctg
gacttcctgtcggacacagatttggcctgtgatgtggtctgcctgatctatgatgtcagc
aaccctcgctcctttgagtactgtgccaaggcctacaagcgctacttcatggacagtaag
acgccgtgcatgatcatcgcggccaagtcggacctgcacgaggtgcggcagcagagcacg
ctccccccgctggacttctgccgcaagcaccggctgcacccgccacagcccttcacctgc
aacagcaccgacgcgcccagcaaagacatctacaccaaactcaccaccatggccatgtac
ccccacgccaagttgcggtgcatgtgcgcctgcaaccggtgcaccttttgcgtctcgcac
aacctgctgaactctgagctggtgcgctctatcaaggccaccctctacacggccctcctc
aacaggttacggccctatgtcgagcacctgggcgcatgcctcttggctgatgaggactcc
agcctcatccaccaggtgcacgaggtcacctatgtagaggagtccatctacatggagtcg
tctgtcgatccctttacgtccagacacatgacccaggctgacctgaagaactccaccttc
tggctgcgggcgagtttgggtgccaccgtctttgccgtgctgggctttgccatgtacaag
gccatcctcaagcagcggtga
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