Sardina pilchardus (sardine): 134077538
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Entry
134077538 CDS
T10667
Symbol
tob1a
Name
(RefSeq) protein Tob1a
KO
K14443
protein Tob/BTG
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134077538 (tob1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spil03019
]
134077538 (tob1a)
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134077538 (tob1a)
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
134077538 (tob1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
SinI
T2SSM
Motif
Other DBs
NCBI-GeneID:
134077538
NCBI-ProteinID:
XP_062389191
LinkDB
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Position
3:complement(38184753..38188472)
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AA seq
345 aa
AA seq
DB search
MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERQLKQKYEGHWYPDKPYKGSGFRCIHV
GEKVDPVVEQAAKESGLDIEDVRNNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDSNDN
GLELDKEIKNSFNPEAQVFMPISEPPSGASPTSSSPSPPFGQSASVSPTFMPRSTQPLTF
TTATFAATKFGSTKMKSSGRNNNNNGSGGGGSGAGGSGKVARTSPTNLGLNVNSLLKQKA
ISTSMHSLYGLGLGAPQPPQQLPKPSALSPNAKEFVFPSLQGQGSPGSVFPGDGPLGLGP
LPYSNAFDVFAAYGGLNEKSLMDGLNFSLNNMQYSNQQFQPVMAN
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgaaatccaagtagcactcaattttataatttcttatctgtacaacaagctg
ccaagacgacgcgtaaacatcttcggcgaggagctcgaacgtcagttgaagcagaagtac
gagggacactggtatccagacaagccatacaaagggtccggcttccgatgcatacacgtc
ggggagaaggtggaccctgtggtggagcaagctgccaaagagagcgggttggacattgag
gacgtccgcaacaacctgcctcaggacctcagtgtgtggatcgaccccttcgaggtgtcc
tatcagatcggggagaaggggcccgtcaaggtgctctacgtggacgatagcaatgacaac
ggcctcgagctggacaaggagatcaagaacagtttcaaccccgaggcccaggtcttcatg
cccatcagcgagcctccatctggggcctcccccacatccagctccccctcccctcccttc
ggccagtcggcctcggtcagccccaccttcatgccacgctccacgcagcctttaaccttc
accactgccacctttgccgccaccaagttcggctccaccaaaatgaagagcagcggccgc
aacaacaacaacaacggcagcggcggcggcggcagcggtgccggcggtagcgggaaggtg
gcccgcacctcccccaccaacctgggcctgaatgtgaacagcctgctgaagcagaaagcc
atctccacgtccatgcactcactctacggcctcggcctgggcgcgccgcagcccccgcag
cagctccccaagccctccgccctctcccccaacgccaaggagtttgtgttccccagcctg
cagggccagggcagcccgggctccgtgttccccggggacggcccgctcggcctgggtcct
ctcccgtacagcaatgcctttgacgttttcgcggcctacggtggcctcaacgagaagtcc
ctcatggatggcttgaatttcagcttgaacaacatgcagtattctaaccagcaattccag
ccagttatggccaactag
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