KEGG   Sardina pilchardus (sardine): 134077639
Entry
134077639         CDS       T10667                                 
Name
(RefSeq) LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 6A protein-like
  KO
K18412  trinucleotide repeat-containing gene 6 protein
Organism
spil  Sardina pilchardus (sardine)
Brite
Messenger RNA biogenesis [BR:spil03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     134077639
Chromosome and associated proteins [BR:spil03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    134077639
SSDB
Motif
Pfam: TNRC6-PABC_bdg RRM_1 RRM_occluded
Other DBs
NCBI-GeneID: 134077639
NCBI-ProteinID: XP_062389324
LinkDB
Position
3:complement(3408908..3450114)
AA seq 2102 aa
MVRVHRRLLRFTLSALASRVCVSCVGKRPLCAPKQTRRRSGAQSLSQREPRPRLRAGKSH
SYKDRKNSQWKSINSGATSTPDVSVATSARTYQVRLKKPASKVCQHPFPFLASPSHSCEA
KRRRQQQYPCTQRHQQCQQGPSAQPQPAPRPASLLAPPSAISARPRSNRKGGKGGAASSR
STPHHPAATLGTQVQLTSIHPGVAITSKGAPLNHQAANSHLSGLDHTGLDSQYENSPWSS
GSDSNSNWGKVIVEGCDKGQWPSITGSDPELASECMDADSASSSGSEKNLSIMASGNTGS
DSNGNRQGSNGQSSPFMVANGSNNVGNGSVKGPWGVSNGPMLSTCQGSGENPGGKLAENS
HGKLNAWGTQGPSTNGGINPSTLNPNANHGAWPVLQNTGPNPLGNGGTNTQRSTVGQMPS
LQSSINSPMSWGTLQDGMAESDVSGTSKLPSGQPQNLNTEMNGPNNTTNTLTSSLPNSTG
SVQMSEQSAGHRAWSVSSGGSPQLPMPSPVSNGTSISQQQQQQQQQHGNGGEGTNGGSYG
TSWGAPPGTTYSGDKCPAPKGPAAGDTVNATLMQPGANGSVSANTNAPFKNNIGSNGLAS
RGGGWDSAPAAGQQQDVSAWGTGNNGMGSASIPRPWGSVSSSSSSSSSSSSSNTGTKVSN
GEWNPLPGNNQHSNDGTNVGRKGTNGWKSLEDDALGLGGGSGGSGGGGSSGPTSQGSTWN
KSTGSEGSGESSCGRGERSGSGSGNRRRVNPPGPITAPLPRVDVDPRVLSNTGWGQTPVR
QNTVWDVSSTEKKPVPDMSGWGTAAPQQTSSSGGGWGDGPGNNNNHHHHNNNNHHHGNND
GSTMSGWGDPKPSSGWGDSKGQSGQSGGWEDSSNKWGGGKEKPSSSTWINAPKTKQGWGN
NSSGDGGWGNGGGDDGGSRGNHWGEPQKPSTGTWERDGDNDRSGSGWNDRGRGGGGTNNS
SSSSSNNTWGGNGGGNAPDQNGPASSGWGEPQKPSTQNQSWGAEPPKPSHACSAPEWGKP
PQDANSGSFRGAPNPQTGGPGPNKAPGWLGGPIPTLQKDEHSTGWEEPSPESIRRRREID
DGTTAWGDPHKYNYGSMNMWNKNMATDQPMEGPPPPQQQQQQQQQQPPPQPQPPQVPTNM
APKEKTCSSGWGETYTAPQKMESSTWGEPPGPPVSVDNGTSAWGKPMDTGSGWEDPNRDG
SGNMGWGNSSMGQHQQPPPHKPVSKPMQDNWCGEEIPMQGTGMHSNWGAEEEEEVEIGMW
NNNTSQETNQSGNWSYMKKMPPKMHKGVGKQEDPWMTPFVKQFNNSMNFSRESEESHKSN
KMDMSGGMMTDKRMDVDKHVMNMGDYGKNAASRHQIHKDSLDRSSYFDKNVNPMFGGSNA
AAQGRSSQQPSAQPLNSAQPNLRTQVPPPLLPSQVPPSLKYPPNNGSLNPLFNPQQVAML
NQLSQLNQLSQLSQIGQLQRLLLQQQQQQQQQQQQQQQQQQQKMNPRAMPVGGRQQEPQG
RPLGPSQQMIQPPRHLDPSLLKQQTSPQPPSLHQPGLKSYLDSLMSQQNASDMQKEQASA
MSSFTNFPLGGCPPHPHSRPTLSQAESLLHQHAGKPNMMFASEMAGCAPAGSSQAHSLLS
PALSNGHMGPGSPLPSRSGRTFACPENNTMSRGLTSNVSNLDIGSVGFKEPQSRLKKWTA
MDISNSPLDQNPSKPGAMSSGLRLEDSPFGPYDFMNASSSPLSPPGSVGDGWPNRAKSPH
GSSNVNWPPEFRPGEPWKGYPNIDPETDPFVTPGSVINNLSINTVRDVDHLRDRNNGPSS
SLNTTLPSNSAWSSIRASNHSGSLSSTAQSTSARNSDSKWSPGTVTNTSLAHELWKVPLP
PKGLSAPSRPPPGLTGQKPPPSSWDNSSLRLAGWSGAESRYTPGSSWGDSSSGRTNWLVL
KNLTPQIDGSTLRTLCMQHGPLITFHLNLPHGNAVVCYSSKEEAAKAQKSLHMCVLGNTT
ILAEFASEEEINRFFAQGQSMTASPGWQTTLGSSQNRLGPSSMEGSAHPFPPTRTDPNHW
NGSGLAGSAGGDLHASSLWGGPNYSTSLWGSPSGGDGARISSPSPISSFLPVDHLTGSGE
AM
NT seq 6309 nt   +upstreamnt  +downstreamnt
atggtgcgcgtccatcgcaggctgctccgcttcacgctgagcgccctcgcgtctcgtgtc
tgtgtgtcttgtgtcggcaagcggcccctgtgtgcacccaagcagacgcgcagacgctcg
ggcgcgcagagcctgagccagcgggaacccagaccgcgtctgagagcagggaaatcacac
agttacaaggacaggaagaatagtcaatggaagagcatcaacagtggagcgacgagcacc
ccagacgtctcagtggccacctctgccagaacatatcaagtccggttgaaaaagccagcc
tcaaaagtctgccaacaccctttccccttcctcgcctccccgtcccattcctgcgaagcg
aagcggcggcggcagcagcagtacccctgcacccagcgccatcagcaatgccaacagggc
ccgagtgctcagcctcagcctgccccgcgcccagcctcgctcctcgctcctccttcggca
atctcggccaggcctcgcagcaatcgaaaaggggggaaagggggtgcagcctcgtcgcga
tccacaccacaccaccccgctgccaccctgggaactcaagtgcagctcacctccatccat
ccaggggtcgcgatcactagcaagggggctccactgaatcaccaagctgccaacagccac
ctctcaggtttggatcacactggcttggattcccagtatgaaaattctccttggagttct
ggcagcgactcgaacagcaactggggaaaagtcattgtagagggttgtgacaagggacag
tggccctccatcactggcagtgacccagagttagcctcagaatgtatggacgctgactct
gcctccagctccgggtcggagaaaaaccttagtataatggcttctgggaacactggcagc
gacagcaacggcaatagacaaggcagcaatggtcagagctccccatttatggttgcaaat
ggcagcaataacgttggcaatgggagtgtcaaggggccttggggcgtttccaatggcccg
atgctaagcacatgccaaggctcaggagagaaccctggtggcaagctggctgaaaacagc
catggcaaattaaatgcatggggtacccaaggtccctcaaccaatggaggtataaatcca
agcactttgaacccaaatgccaaccatggtgcctggcctgttctgcagaacactgggcct
aaccccctcgggaatggtggcaccaacacacaacgaagcaccgtaggtcaaatgcccagc
cttcagagtagtattaactctccgatgtcctgggggaccctgcaggacggcatggccgag
tccgacgtcagcggtacaagcaagcttccaagtgggcagcctcaaaaccttaacactgaa
atgaatggaccaaataacactactaacacgttgacctctagtttaccaaactctacaggt
tcagtgcagatgagcgagcagtccgcagggcaccgagcctggtctgtgagctcagggggc
tccccgcagctccccatgccctctcccgtctccaacggcacttccatttctcagcagcag
cagcagcagcagcagcagcatggcaacggcggcgaaggaacgaacggcgggtcgtacggt
acgtcgtggggcgctccgcccggcactacttattccggagacaaatgccccgcgcccaaa
ggccccgccgcgggcgacactgtgaacgcaactctaatgcagccgggggccaacggctcg
gtctccgccaacaccaatgctcccttcaagaataatatcggcagcaacgggctagccagc
cgcggaggaggctgggattcggcccccgccgccggccagcaacaagatgtctccgcctgg
gggacgggtaataacggcatgggctccgccagcatccccaggccctggggcagcgtgtct
tcgtcctcctcctcttcctcctcctcctcttcttcaaacactggcactaaggtctccaac
ggggagtggaacccactgcccggcaacaatcagcattccaatgacggcacaaacgtgggc
aggaagggaacaaacggctggaagtccctggaggatgacgccctgggcttgggcggcggc
agcggcggcagcggcggcggaggaagcagcgggccgacctctcagggcagcacatggaac
aagtccacgggcagcgagggcagcggcgagagctcctgcggccgtggcgagcggagcggc
agcggcagcggaaaccggcgaagggtcaacccgccgggccccatcaccgcgccgctgccc
cgggtggacgtcgacccccgcgtcctgtccaacaccggctggggccagacgcccgtccgg
cagaacacggtctgggacgtctccagcacggagaagaagccggtcccggacatgtccggc
tggggcaccgcagccccgcagcagacgtccagctccggcggaggatggggagacgggccc
ggcaacaacaacaaccaccaccaccacaacaacaacaaccaccaccacggtaacaacgat
ggatccaccatgtcagggtggggcgatccaaagccatcctctggatggggcgactccaaa
ggccagagcgggcagtccggaggctgggaggacagttcaaacaaatggggtggcggcaag
gaaaagccctcctcctccacctggatcaacgcccccaagaccaaacagggctggggcaac
aactccagcggagacggaggctggggcaatggaggtggtgatgacggcggctcgcgcgga
aaccactggggtgaaccccagaagcccagcacgggaacctgggaacgggacggcgacaac
gaccgttccggctcgggctggaacgataggggtcgcggcggcggcggcactaacaacagc
agcagcagcagcagcaacaacacctggggcggcaacggtggcggcaacgcccctgaccag
aacgggccggcgagcagtggctggggagaaccccagaaacccagcactcagaaccagagc
tggggggccgagccgcccaaacccagccacgcctgcagcgcccccgagtggggcaagcca
ccgcaggatgccaacagcggatccttccgtggagcccccaatccccagacgggcggccct
ggccccaacaaagcccctggttggctgggaggccccatccccactctccagaaggacgag
cactccacgggctgggaagagccttcccccgagtccatcaggcgccgcagggagattgac
gacggcacgacagcgtggggagacccccacaaatacaactatggcagtatgaacatgtgg
aataagaacatggctacagatcagcccatggagggacccccgcccccacaacagcagcag
cagcagcagcagcaacaacccccaccgcagccccagcccccccaggtcccaaccaacatg
gctcccaaggagaagacttgcagctcaggttggggagagacgtacactgcgccacagaag
atggagtcctccacttggggtgagccgcctggaccaccggtctccgtggacaacggcacc
tcagcctggggcaagcccatggacacggggtccggttgggaggatccgaacagagatggt
tctggcaacatgggctggggcaactcatccatgggccagcaccagcagcctcctccgcac
aagcctgtatccaaacctatgcaagacaactggtgtggagaagagatccccatgcaaggg
acgggaatgcattcaaactggggggcggaggaagaggaggaggtggagatcggtatgtgg
aataacaacacctcacaggagaccaaccaatctggaaactggtcctacatgaagaagatg
cctccaaagatgcataaaggtgttggtaagcaagaagatccatggatgactccgtttgtg
aagcagttcaacaattcaatgaatttctcaagagaatctgaagaatcccacaagagcaat
aagatggacatgtctggtggaatgatgactgacaagagaatggacgttgacaagcatgtt
atgaacatgggcgactacggcaagaatgccgcctctcgccaccagatccacaaagactcc
ttggaccgcagtagctactttgataagaatgtaaacccaatgtttggtggtagcaatgca
gcagcacaaggccggagctcccagcagccttcagcacagcctctgaactctgcgcagccc
aatctccgtactcaagtgcctccacctctactgccctctcaggtccctccgtctttgaag
taccctcccaataatggaagtctgaaccccctgttcaaccctcagcaggttgccatgctc
aaccagctgtcccaactgaaccagctgtctcagctctcccagatcggccagttgcagcgc
ctccttctccagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcag
cagcagaagatgaatcccagggccatgcccgttggtgggcgtcagcaggagccacagggt
cgccccctgggcccctctcagcagatgatccagccgccgcgccacctcgacccctccctg
ctgaagcagcagacctctccgcagcctccctccctgcaccagccgggcctcaagtcctac
ctggacagcctcatgtcccagcagaacgcgtcagacatgcagaaagagcaggccagcgcc
atgagctcgttcactaatttccctttaggtgggtgtcctccccatccccattcccgtccc
acgctaagccaggccgagtctctgttgcaccaacacgctggcaagcccaacatgatgttt
gcctccgagatggcaggctgtgctcccgctggcagtagtcaggcccatagcctccttagc
ccagccctgagcaacggtcacatggggccgggctcacccctcccatcccggtccgggagg
acctttgcctgtcccgagaacaacacaatgtcaagaggtttgacctcgaatgtaagcaat
ctagacatcggcagtgttggtttcaaggagccccagtcccgtctgaagaagtggactgcc
atggacatttccaactcgccacttgatcaaaatcccagcaaacctggtgctatgtcctct
ggtttgaggcttgaggactccccctttggtccgtatgacttcatgaacgccagcagctcc
cccctcagtcctcctgggtcagtgggggacggctggcccaaccgtgccaaatcacctcat
ggttccagcaacgtcaactggccaccagaattccgacctggtgagccctggaaaggatat
ccaaacattgaccctgaaactgaccccttcgtcactcctggcagtgtgatcaataatctc
tccattaatacagtgcgggatgttgatcacctcagggacaggaacaatgggccatcctca
tcacttaacaccacgctgccttcaaatagtgcctggtcatccattcgtgcctccaaccac
agtggttccctcagcagtacagcacaaagcacttcagccagaaacagtgactccaaatgg
tcccctggtacagtcaccaacacctctttggctcatgaactgtggaaagttcctctcccc
cctaaaggcctctccgctccgtcccgtccccctcccggcctcaccggccagaagccgccg
ccctcgtcctgggacaacagctccctccggctggcgggctggtctggtgctgagtccaga
tatactcctggctccagctggggtgatagcagctcagggagaactaattggctcgttctc
aaaaatcttacacctcagatcgacggatccaccctgcgcactctgtgcatgcagcacggc
ccactgattacattccacctgaacctgccccacggtaacgctgtggtctgttacagctcc
aaggaggaggcagccaaagctcaaaagtctctgcacatgtgcgttttagggaacactact
attcttgctgagtttgctagcgaagaggaaatcaaccgtttctttgcacaaggtcagtcc
atgactgcctctcctggctggcaaacgacgctgggctcatcccagaaccgcttgggcccc
agctccatggagggctcggcccaccccttcccacccacccgcactgatccgaatcactgg
aacggcagtggcctggcagggtccgccgggggagaccttcacgcctcctcactgtggggg
gggcccaactattccactagcctgtggggaagcccaagcggtggcgacggggcgcgaatc
agcagcccctcccccatcagctccttcctacctgttgatcacctcacaggaagtggggag
gccatgtag

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