Sardina pilchardus (sardine): 134077646
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Entry
134077646 CDS
T10667
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
spil00535
]
134077646 (col14a1a)
Proteoglycans [BR:
spil00535
]
Extracellular matrix (ECM) proteoglycans
Others
134077646 (col14a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
VWA_3
DUF4992
vWA_SIBA-E
DUF4959
DUF1391
Motif
Other DBs
NCBI-GeneID:
134077646
NCBI-ProteinID:
XP_062389330
LinkDB
All DBs
Position
3:complement(5306322..5377645)
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AA seq
1748 aa
AA seq
DB search
MGLEWVTQFSCCSATELLCQLSQADQFVCTTSSIADIVILVDGSWSIGRLNFRLVRNFLE
SLVTAFDVDINKTRIGLAQYSGDPRIEWHLNAFPTKDAVMDAVKTLPYKGGNTLTGLALT
YIQEHSFKTESGARSGVPKIGILITDGKSQDDVIPPAQSLRDAGIELFAIGVKNADENEL
QSIASPPIDTHMYNVADFNIMSSIVEGLTRIVCERVQEQDKEIKRDYVPPEPQGPPQRLV
TSEVGARSFRVSWSPAPGSVQKYRVVYHATSSPASIQETVVDGSESSVLLTNLHALTEYA
IAVFSVYASASSEALRGSQTTLALPKVAEMNLDDVTHSSMRVHWRSVEGASGYMILYTSP
TLEDADKTEIRVPESVTDIQLTALSPDTEYMVNVYALFGDDTSDPRTGQETTLPLSPPRN
LQILDVKHSSARLSWGPGAKDVQGYRVGYVVTGGIQTNEVEAGPVTSLVLKDLASLTEYT
VAVFAIYDAGQSEALSGSFVTLEVPEPLDTLTSDVSSDSFRVSWTHPAQDVLLYKLAWVP
LDGGDSMEVVVPGDQDSYVLTGLEARTEYEVFLSASYSGDVESEAVALLETTLDRSTVAS
PTEEPRFGLSDIRVDEETASSLRVSWEIEDANVEQFKVSYRSQRGSRNEEVALVPGSQMS
VTLQPLLSDTEYSVTVIPVYTDGEHSDLSLSSRGKTLPLGAPGNLRVSEESYDRLRITWD
PAPFPTQGYKIFYQPSSAPTMASVGDGETTRLLYNLQTDTEYAIEVVAMYSNGQSEPLQG
TGRTLRLAVKSLSTYQVRSSSMCVQWQPLAQASLYRISIESPLNGHRQQESVAGSASRHC
FHDLLPNTQYQISHHSQLQGLEGPAVTTTDTTLPAPTQPPTTPPTTTPPPTIPPAKEVCK
AAKADLVFLVDGSWSIGDDNFQKIIRFLYSTVGSLDVIGLEGTQVAIAQFSDDARTEFKL
NSHSDKQSLLDAIQRISYKGGNTKTGRAMKHVKESIFTEEGGLRRGVPKVLVVLTDGRSQ
DDVNKVSKEMQIDGYIIFAIGFADADYGELVNMASKPSERHVFFVDDVDAVKKIEEQLIT
FVCEAATATCPSLLMSGNTLAGFRMMEMFGLVEKSYSSVQGVSMEPGTFNSFPCYRLHKN
ALISQPTRYLHPEGLPSDYTLTMLFRLLSDTPQEPFALWEILDSDSEPLVGVILDNGGKT
LTFFNHDYKGDFQAVTFDGPDIKKIFHGSFHKLHMAISKTAAKVVVDCKMAGEKPINAAG
NITTDGVEMLGRMVRSRERRDDSAPFQLQMFDIVCSTSWSSRDKCCELPGLRKEEDCPAM
PHACTCSQDSKGPPGPSGPPGGPGIRGMRGSQGEPGSTGSQGPAGEMGPPGPQGPPGPQG
PSGMSIQGAPGAAGERGEKGEMGPAGPQGVPGSPGSSGRDGPPGQRGLPGKDGPQGRQGA
GGPIGTPGAPGAPGSNGPPGPMGDPGTAGPAGVKGERGERGDLQSQAAVRAIARQVCEQL
IQSHLSRYNSILNQIPSQSVSVRTVPGPPGEAGRPGPRGPQGEQGHAGRPGFPGSNGQSG
RPGERGLPGEKGERGITGVGTQGPRGPPGPPGLPGEGRTGSQGPAGRPGTPGSQGRPGTP
GSTGPSGPAGYCDQSACMGYNGRVQQLSPNAYQTYGGQAPGQYQNPAPNPYQNYGVPAPN
NNYGQGEEEDEEEEEEDPYAGYRAYPPQYHQPNNYPGAHPGMPHGRSPRSASGADEERAG
DRALDKRE
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atgggcctggagtgggtcacccagttctcctgttgctcagccaccgaactgctctgccag
ctaagccaagctgaccagtttgtgtgcacaacctcatccatcgccgacatcgtcatcctg
gtggacggctcctggagcatcggcagactcaacttccggctggtcaggaatttcctggag
agcttagtgactgcctttgacgtggacatcaacaagacacggataggcttggctcagtac
agtggagacccccgtatcgagtggcacctcaatgccttcccaaccaaagacgccgtgatg
gacgctgtgaagacccttccctacaaaggaggcaacaccctcacaggtctggccctcacc
tacatccaggagcacagcttcaagacggagtcgggagccagaagcggcgttcccaaaatt
ggcatccttatcaccgacggcaaatcccaggatgatgtcattcctccggcccagagcctc
cgggacgcgggcattgagctcttcgccatcggtgtgaagaacgccgacgagaacgagctg
cagtccatcgcctccccgcccatcgacacacacatgtacaacgtggccgacttcaacatc
atgagctccatcgtggagggcctcacccgcatcgtgtgtgagcgcgtccaggaacaggac
aaggagatcaaacgggactatgtgcccccagagccgcagggtcctccccagcgcctggtc
acctccgaggtgggcgcgcgcagcttccgcgtgtcctggtccccggcgccgggcagcgtg
cagaagtaccgcgtggtctaccacgccaccagcagcccggccagcatccaggagactgtt
gtggatggcagcgagagttccgtgctgctgaccaaccttcacgctctgacggagtacgcc
atcgccgtgttctccgtctacgccagcgccagcagcgaggccctccgcgggagccagacc
accctggccttacccaaggtggccgagatgaatctggacgacgtgacccacagcagcatg
cgtgtgcactggaggagcgtggagggggcctctggctacatgatcctgtacacatcaccc
accctggaggatgcggataagacggagatacgagtgccagagtcggtaacagacatccag
ctgacagccctgagcccagacacggagtacatggtgaacgtgtacgccctgttcggagac
gacaccagcgacccgaggaccggccaagagaccacactgcccctgtcgcctccgcgcaac
ctgcagatcctcgacgtgaagcacagctccgccaggctaagctggggcccgggagccaaa
gacgtccagggctaccgcgtcggatatgtcgttaccggaggaatccaaacaaatgaggtg
gaggccggaccggtcacttccctggtgctgaaggacctggcttccctgacggagtacacg
gtcgctgtcttcgccatctatgacgcgggccaatcagaagcgctgagcgggagcttcgtg
accttggaagtgcctgagccgctggacacgctgaccagcgacgtgagctcggacagcttc
cgcgtcagctggactcatcccgcgcaggacgtgctgctctacaaactcgcctgggtcccg
ctcgacggaggagacagcatggaggtggtggtgcccggcgaccaggactcgtacgtgctg
acggggctggaggcgcggacggagtacgaggtgttcctctcggcctcctacagcggcgac
gtggagagcgaggccgtcgccctcctggagaccacactggatagatctacagttgcctcg
ccaacagaagagcctcgcttcggtctgagcgatatcagagtggacgaggagacggcgtcc
agcctgcgggtgagctgggagatcgaggacgcgaacgtggagcagttcaaggtgtcctac
aggagccagagaggaagtcgaaacgaagaggtggcgctggttccaggctcccagatgagt
gtgactctgcagcctctcctctctgacacggaatacagcgtgaccgtcatccctgtctac
acggatggagaacacagtgacctctccctctcatccagaggaaagaccttgcccctgggc
gcccccgggaacctcagagtgtccgaggagtcgtacgaccgcctccgcatcacctgggac
ccggcgcccttccccacgcaaggctacaagatcttctaccagcccagctcagcgcccact
atggcgtcggtgggtgacggggagaccacgcggctgctgtacaatctccagacggacacc
gagtacgccatcgaggtggtggccatgtactccaacggccagagtgagcccctacagggc
accggcaggacattgcgtctggctgtgaagagcctgagcacgtaccaggtgcgcagctcc
agcatgtgtgtccagtggcagccccttgcccaggcctccctctacagaatctccatcgag
tcgccactcaacgggcaccggcagcaggagagcgtggcggggagcgcctctcgccactgc
ttccacgacctgctccccaacacccagtaccagatcagccaccacagccagctgcagggc
ctggaggggcccgcggtcaccaccaccgacaccacacttcctgctcccacgcagcctccg
accacacctcccacgaccaccccaccacccaccatccctccagccaaagaagtgtgtaaa
gctgccaaagcagaccttgtcttcctcgtggatggctcgtggagtattggagacgacaac
ttccagaagatcatccgtttcctctacagcacagtcggatctctggatgtgattggttta
gaaggaacacaggttgccatagcgcagttcagtgacgacgccagaactgagttcaagctc
aactcccacagtgacaaacagtctctgctggacgccattcagcgcatttcctataaggga
ggaaacacaaaaacaggtcgggccatgaagcacgtgaaggagtccatcttcaccgaggag
ggcggcctcaggaggggagtacccaaagtgctggtcgtactcacggatggacgatcccag
gacgatgtcaacaaagtctccaaggagatgcagatagacggctacatcatctttgccatt
ggttttgccgacgccgattatggcgagctggtcaacatggccagcaagcccagcgagagg
cacgtgttcttcgtggacgacgtggacgccgtgaagaagatcgaggagcagctaattacc
tttgtgtgcgaggccgcgactgctacctgtccatccctgctgatgagtgggaacacgttg
gcagggttccgcatgatggagatgttcggcctggtggagaagagctacagcagtgtgcag
ggcgtttccatggagccgggaacgttcaacagcttcccctgctaccgcttgcacaaaaac
gcactgatctcccagccaaccagatacctccaccctgaaggccttccgtcggactacacc
ctcaccatgctgttccgcctgctgtctgacaccccgcaggagccctttgcattgtgggag
attctcgacagcgacagtgaacccttggtgggcgtgatcctggacaacggtgggaaaaca
ctgaccttcttcaatcacgactacaagggagacttccaggcggtgaccttcgacgggcct
gacattaaaaagatcttccatgggagtttccacaagctacacatggccatcagcaagact
gcagccaaggtggtggtagactgcaaaatggccggggagaagcccatcaacgctgctggc
aacatcaccacagacggcgtggagatgctgggtcgcatggtgcgctcccgtgagcgacgg
gacgactccgcaccgttccagctccagatgtttgatattgtatgcagtacatcttggtcc
agccgagacaagtgctgtgagcttccaggcctgaggaaagaggaagactgccctgcaatg
ccccatgcctgcacatgctcccaggacagcaagggcccccctggtccatcaggtccaccg
ggtggtcccggtatcagaggtatgcgaggtagtcaaggagagcctggcagcacgggatct
caagggccagcaggagagatgggtccccctggcccacagggaccccccggcccccagggg
ccaagtggaatgtccattcagggagctccgggagcagccggagaaagaggagagaaagga
gaaatgggcccagcaggaccacagggtgtccctggttcacctggatcttccggacgcgac
ggcccacctggacagaggggtctcccaggaaaggacggaccgcagggcagacagggtgca
ggtggacctatcggcaccccaggagcgccgggagcaccggggtctaacggccccccaggg
cccatgggagatcctggaacagctggacctgccggtgttaaaggtgaacgaggggaacgg
ggggatctgcagtcgcaagctgcggtgcgcgccattgctcgacaagtgtgtgagcagctg
atccaaagtcatctgtctcggtacaactccatcctgaaccagatcccgagccagagcgtg
tccgtgcgcacggtgcccgggcctcccggagaggccggccgcccggggccacgcggcccg
caaggggagcagggccacgccgggagacccggatttcccgggagcaacggacagagcggc
cggccaggagagcgaggtttacctggagagaaaggagagaggggaatcacaggcgtggga
acgcagggtcctcgaggtccgcctggccctccaggacttccgggagagggtcgcactggc
agccaaggccccgctggcaggcccggcaccccgggcagtcaaggacgcccaggaacccca
gggagcaccggcccgtccggcccagcaggatactgcgaccagagcgcctgcatgggctac
aacggcagagtgcaacagttgtcccccaacgcttaccaaacctacggtggtcaagctcca
ggccagtaccagaaccctgctccaaatccctaccagaactacggggtcccagctcccaat
aacaattacggccaaggggaggaggaagatgaggaggaggaggaagaggacccttacgcc
ggttaccgcgcctacccgcctcagtaccatcagcctaataactaccccggcgctcacccc
ggcatgccgcacggcaggtcaccacgatcggccagcggtgcagacgaagagcgtgctggc
gaccgagcgctggacaaacgagagtga
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integrated database retrieval system
