Sardina pilchardus (sardine): 134077754
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Entry
134077754 CDS
T10667
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
spil04040
]
134077754 (scn1laa)
Ion channels [BR:
spil04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
134077754 (scn1laa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
Spem1
GPHH
IQ
Lustrin_cystein
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
134077754
NCBI-ProteinID:
XP_062389380
LinkDB
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Position
4:complement(8209951..8232229)
Genome browser
AA seq
1973 aa
AA seq
DB search
MAQLLLPPGPDSFRPFSRESLKAIENRIREEAQNKPKDKRAKDDENAPKPNSDLEAGKIL
PFIYGDLPPELVSTPLEDMDPYYSNKKTFIVLNKGKTIFRFSAKRALYILSPFNPIRRIA
IRVLVHRLFSMLIMCTILTNCGFMTQPSNPKPVEYTFTAIYTFESLIKILARGFIVEPFT
FLRDPWNWLDFCVIVMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSV
KKLADVMILTVFCLSVFALIGLQLFMGNLKHKCVKLKYDKNESASVNHIISDSNYSSDPE
NHYFIRGHKDALLCGNGSGAGVCPDGYWCYKAGKNPDYGYTSFDSFGWAFLSLFRLMTQD
CWERLYQQTLRAAGKPYMIFFILVIFLGSFYLVNLILAVVAMAYDEQNQATIEEAQQKEE
EFQAMLETLKRQPEEVKSELQNNLIYCLLDGLSSSSSNVSRFSSKSAKERRNRRKRRKDG
ERGGSERSHNSESEDSIRRPSLRFLDRNNRLSFKEHPSSPHQSILSFQGSILSPRRNSRS
SVFSYRGGALEETGFADDEHSPFDKGSRHGSFFLPRRPRFSETSVPSLILRPANGKIQSS
VNHNGIGSQVAGGSLPSSPAHLRLPVDSPGSGSFRRVRYGSNSDFLDDLAIRQRALSVAS
IITTVEELEEARQKCPPCWFEHAKALLIWDCPSWVKIKQTVNLIVMDPFADLAITICIVL
NTVFMSMEQHPGSELLTRVLYVGNLVFTAIFTGEMVLKIIAMDPYYYFQDSWNIFDSVIV
ILSLIELGLAKLSGMSVLRSFRLLRIFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAII
VFIFAVVGMQLFGTSYRKNRCKIIHSNDCDPNCTVNCFLPRWHMHDFPHSFLIVFRVLCG
EWIETMWDCMEVHEGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLTAVEDDSDT
NNIQIAMARIHRAIAWVKLKVRLSFRSLCVRKKKQKKPLAMVKSVDSRTNNGMDNGIYFP
NHTTVEFIKDLDCWKESNGVAAGLEDTAENYIRSNEDVYLTFVSNPDVTVSVPIAAGESD
FENLNTEDFSSLSSDIEDDIKEKLEDDGAFSSSEGSTVDIRLSGESMDLEMEESMDPDPC
FTTGCVQRLPCCQVDIEKGIWKSWWTLRKTCFRIVEHNWFETFIIFMIMLSSGALAFEDV
ELVNRPRIRIILEYADKVFTYIFILEMLLKWVAYGFAKYFTNYWCWLDFVIVDISIISMV
ANALNCNQGAIKSLRTLRSLRPLRAMSRFEGMRVVVNALLGAIPSIFNVLLVCLIFWLIF
SIMGVNFFAGKYHYCANATTGEQFDWEVVPNRNMCSQTHGARWKNVKINFDNVAAGYLAL
LQVATYKGWMAIMYAAIDSRQTDDQPKYEAKMIAYVYFVVFIIFGSFFTLNLFIGVIIDN
FNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKIQGFVFDLITKQGFDI
LIMVLIFLNMVTMMIETDEQSNEKEQILVKINLVFIVLFTSECVLKMIALRHHYFTVSWN
VFDFIVVILSVVGMFLAEVIEKYFFSPTLFRVIRLARIGRILRLVKSAKGIRTLLFALMM
SLPALFNIGILLFLVMFIYSILGMSFFAYIKREDGIDDMFNFETFGNSMICLFQITTSAG
WDSLLSPMLNDEPDCNRTKENPGSRIKGDCGNAAVGIAFFVSYVIICFLIVVNMYIAVIL
ENFSVATEESAEPLGEDDFEMFYEVWEKFDPKATQFINYDKLSDFANALNPPLRMAKPNA
VQLINMDLPMVSGERIHCLDILFAFTKRVLGEGGELDVLRGQMEERFMASNPSKVSYEPI
SSTLRRKQEFMSAILIQRAFRRYLIRRTVKQGSSIFNYESDEEEEEECPPDKGSTDKLNE
SPVSAQGSDRSPSTLSPQSSNSVRGPEKDKYEKDKREKEVKGKDNEQESKGDK
NT seq
5922 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgctgctgccacccggaccagacagcttccgtccgttcagccgcgagtca
ctcaaagccatcgagaatcgcatccgcgaggaggcccaaaacaagccaaaggacaagcgg
gccaaagatgacgagaatgccccgaaacccaatagcgacctggaggcggggaaaatcctg
cccttcatatacggggacttgccccctgaactggtgtccacccctctggaggacatggac
ccttattacagcaacaaaaaaacctttatagtgttgaacaaagggaagacaatcttccgc
ttcagtgcaaaacgcgctttgtatattttaagccccttcaaccccattaggagaattgct
attagagttttggtgcatcgattgttcagcatgttgatcatgtgcaccatcttaaccaac
tgtgggtttatgacacagccttcgaatccaaagcctgtggagtacacattcaccgcaata
tatacttttgaatccctcattaaaattcttgcaaggggctttattgtggagccgtttacc
tttctaagggatccatggaattggttggacttctgtgttattgtcatggcgtatgtaaca
gagtttgtaaacctaggcaatgtttcagctctgcgcactttcagagtattgagggctttg
aaaactatttcagtgatcccaggtctgaagactattgtaggagcactcatacagtcagtg
aagaagctggctgatgtcatgatactcaccgtgttctgcttgagtgtctttgctctgatc
gggctgcagctcttcatgggcaaccttaagcacaaatgtgtcaaactgaaatacgacaaa
aacgaaagtgcatcagtgaatcacatcataagtgactcaaactatagctcggacccagaa
aaccactacttcatccgtggccataaagatgccttgctgtgcgggaatggcagtggagct
ggggtatgcccagacggctattggtgctataaagcgggcaagaacccagactacgggtac
acaagcttcgactcttttggttgggccttcctgtctctgttcaggctgatgacccaggac
tgctgggagcgactctaccagcagactctcagggcagcaggaaagccctacatgattttc
ttcatcctggtcatcttcttgggctccttctacctggtgaacctgatcctggctgtggtg
gccatggcctacgacgagcagaaccaggccaccatagaggaggcccagcagaaggaggag
gagttccaagctatgttggagacgctgaaaagacaaccggaggaggtaaaaagcgagtta
cagaataacttgatctattgcttacttgacgggctatcatcgtcatcttccaacgtctcg
agattcagttccaaaagtgccaaggagcgccgcaaccgcagaaaacgcagaaaagatggg
gagaggggtggcagtgagcggtcacacaattccgagtcggaggacagcatcagaagaccc
tctctccgtttcctggacaggaacaaccgcctttcctttaaggagcatccttcatcccca
catcagtcgatccttagtttccaagggtccattttgtcacccagacggaacagcaggagt
agtgtcttcagttaccgtggcggggcattggaagaaactggttttgctgatgacgagcac
agcccctttgacaagggcagccggcatggctccttcttcctgccacgcaggccccgcttt
agtgagaccagcgtcccctcccttatcctccgaccagccaacggcaagatccagagctcc
gtgaaccacaatgggatagggtcccaggtggccggagggtcgctgccctcatcacctgct
caccttcgcttgcctgtggattctcctggcagtggttccttcaggagggtccgatatggt
tctaactcagactttttagatgacctggctataaggcaaagagccctgagcgtggccagt
attatcaccacagtggaagaacttgaagaggcaagacagaagtgccctccatgttggttt
gagcatgccaaagctcttctcatctgggactgtccctcatgggtgaagatcaagcaaact
gtcaaccttattgtgatggacccttttgctgatctagccataaccatctgtatagtctta
aatacagtgtttatgtcaatggagcaacatccagggtcagaactgttaacacgtgttctc
tatgtagggaacctggtatttacagcaatcttcactggtgagatggttttgaagattata
gctatggacccatactattatttccaagatagctggaatatatttgacagtgttattgtc
atcttgagcttgatagagcttgggctggcaaaactatcagggatgtctgtgctcaggtct
ttcagattgttgaggatcttcaaacttgccaagtcatggcccactctgaacatgctgatc
aagatcatagggaactcagtaggcgccctggggaacctcaccttggtgctggccattatt
gtcttcatctttgctgtggttggcatgcagctgtttggcacaagctacagaaaaaataga
tgcaaaatcattcacagtaatgactgtgaccccaactgtactgtgaattgttttctgcct
cgctggcacatgcatgactttccccattccttcctgattgtgttccgggtgttgtgtggc
gagtggattgagaccatgtgggactgcatggaggtccacgagggccaggccatgtgtctc
actgtcttcatgatggtcatggtcatcggaaatttggtggtcctcaacctctttcttgcg
ctgctgctcagctctttcagtgctgacaacctgacggctgtggaagacgacagtgacaca
aacaacattcagatagccatggctcggatccatagggccattgcttgggtgaagctcaag
gtgcgtctctcctttcggagcctttgtgtgagaaaaaagaagcaaaagaagcccttggcc
atggtcaagtcagtggacagccgcaccaacaatggaatggacaatggaatctattttccc
aaccacactactgttgagttcatcaaagacctggactgttggaaggagagtaacggagtg
gctgcagggttggaggacacggcagagaactacatcaggtccaacgaggatgtgtatttg
actttcgtcagtaatcctgacgtaactgtctcagtgcccattgctgcaggcgaatcggac
tttgagaacctcaacacggaagacttcagcagcctgtcctctgacatagaggatgacatc
aaagagaaactggaggacgacggtgcgtttagctcctcagagggtagcacagtggacatc
agactcagtggagagtcaatggacctggagatggaggagtcaatggaccctgatccttgc
tttacaactggttgtgtccagagattaccctgctgtcaggttgatatagaaaaaggtatc
tggaagtcgtggtggaccctgagaaagacatgcttcagaatcgtggaacataactggttt
gagaccttcatcatcttcatgatcatgctcagcagtggggcacttgcttttgaagacgtt
gaacttgtcaataggccaaggataaggattatcctggaatatgccgataaagtattcacc
tacatattcatcttggagatgttgttaaagtgggtggcctatggatttgccaaatacttc
accaactattggtgttggctggactttgttattgttgacatctctataatcagcatggtg
gccaatgctctgaactgcaaccaaggggcaattaaatccctgaggacactgaggtctctg
agacctctcagagccatgtcacgcttcgagggcatgcgggtggtggtgaatgccttgctg
ggagcgattccttctatcttcaatgtcctgctggtctgcctcatcttctggctaattttt
agcataatgggagtcaatttctttgccggaaagtatcactattgtgccaatgctacaact
ggagaacaatttgattgggaagtagttccgaacaggaacatgtgcagtcaaacacatggg
gctcgttggaagaatgtcaagattaactttgacaatgtggcggcaggctatttggcatta
ttgcaagtggcaacatataagggctggatggcgatcatgtatgctgctatagactcacgt
caaaccgatgaccagccgaagtacgaagccaaaatgattgcgtacgtctactttgttgtg
ttcatcattttcggttcattcttcaccctcaacctcttcattggtgtcattatcgacaac
ttcaatcagcagaagaaaaagttcggaggtcaggatatcttcatgactgaggagcagaag
aagtattacaatgccatgaaaaaacttggatccaagaagccccagaagcctattcctagg
ccatcaaacaagatacaaggatttgtctttgaccttataaccaagcagggctttgatatt
ttgatcatggttcttatatttcttaatatggtaaccatgatgatcgagacagacgagcaa
tccaatgagaaagagcagatccttgtcaagattaacttggtgttcattgtactgttcacc
tcagaatgtgtattaaagatgattgcacttcgccatcactatttcactgtcagctggaac
gtatttgacttcattgtcgtcatcctctcagtagttggtatgtttctagcagaagtgata
gaaaagtatttcttctcgccaaccctgtttagagtgattcgtcttgcgagaattggacgc
atcctacgcctggtcaaaagtgccaagggaattcggacacttctgtttgctctgatgatg
tcattgccggccctgtttaacattggcatcctcctcttcttggtgatgttcatctactcc
atcctgggcatgtccttctttgcctacataaagagggaggacggcatagacgacatgttc
aacttcgagacgttcggcaacagcatgatctgcctgtttcagatcaccacctcggctggg
tgggacagcctcctgtcgcccatgctcaacgacgagccagactgcaacaggacaaaggag
aaccccggcagccgcatcaagggcgactgtggcaacgcggcagtgggcatcgccttcttc
gtctcgtacgtcatcatctgcttcctgatcgtggtcaacatgtacatcgccgtcatcctg
gagaacttcagcgtggccacggaggagagcgccgagccgttgggcgaggacgactttgag
atgttctacgaagtgtgggagaagttcgaccccaaggccacgcagttcatcaactacgac
aagctgtcggactttgccaacgcgctgaacccgccgttgcgcatggccaagcccaacgcg
gtgcagctgatcaacatggacctgcccatggtgagcggcgagcgcatccactgcctggac
atcctgtttgccttcaccaagcgcgtgctgggcgagggtggcgagctggacgtcctgcgc
ggccagatggaggaacgtttcatggcctcgaacccctcaaaggtttcgtacgagcccatc
tcctccacgctgcgccgcaagcaggagttcatgtcggccatcctcatccagagagccttc
cggaggtatctgatccggaggactgtcaaacagggctccagcatattcaactacgagagc
gacgaagaggaagaagaagagtgcccgccggacaaaggctccacggacaaactgaacgag
agccccgtgtcagcccagggctcggacaggagcccgtccacgctgtccccacagtccagt
aatagtgtcagagggccagaaaaggacaagtatgagaaggacaagagggagaaggaagtg
aaaggcaaagacaatgaacaggagagtaaaggagataaatga
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integrated database retrieval system
