Sardina pilchardus (sardine): 134077975
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Entry
134077975 CDS
T10667
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
134077975 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spil03019
]
134077975 (bard1)
04121 Ubiquitin system [BR:
spil04121
]
134077975 (bard1)
03036 Chromosome and associated proteins [BR:
spil03036
]
134077975 (bard1)
03400 DNA repair and recombination proteins [BR:
spil03400
]
134077975 (bard1)
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
134077975 (bard1)
Ubiquitin system [BR:
spil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
134077975 (bard1)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
134077975 (bard1)
DNA repair and recombination proteins [BR:
spil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
134077975 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
zf-RING_6
Ank_4
Ank_3
Ank_5
BRCT
BRCT_2
zf-RING_5
Ank_KRIT1
PTCB-BRCT
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
134077975
NCBI-ProteinID:
XP_062389591
LinkDB
All DBs
Position
4:complement(5739149..5757875)
Genome browser
AA seq
784 aa
AA seq
DB search
MSQNTWQKTKEAVKDFRKLLQCSKCFKLMREPLCLGTCEHMFCKSCAGACAGGECSVCSC
PAWVKDIQINRQLSNITDLFRNLEALLTPPGLSAMPPAEPCEAAEVSPIVKRKKKYRIWT
SPRSHRIRCRVESRGEVTLVPADPAPDPPRSQRALFPPQDASVYNFPASSQDSGSSSPSR
TASSGGNKRKRKPAKNTRVRQAVARAQMTVTRKQKIKLQLQVINQQWGVGTDAEASAPEE
RLQEGEGGGDGGEREGKRPKKRVSFQSLDAPLPEDHPKENAPPSENLVTVRSAMSDTGLL
SGPATAPPESIKQPASPAPKLSPCRTPKRARSAGGGVEPQRSPKRPRTSPGGGRRLAAGD
GLYALSTPPPSPQALSSPRGSPGGSGREPGLSPGPSPAGGRRSQGRLSQGSPAFAKRNHK
GETPLHLAAIKGDVEAVKRLLEQGADPNLKDNAGWTALHEASNHGHVALVEALILGGALL
NTPGYQNDSPLHDAVRNGHAAVAKLLLEHGASQSVLNMFGLRALDCAETDDMRHILLGAS
ERGHHPLNSPLSPPASLSKTGGCGQKDGRVTLLGSKLTQPQRRQLAQAARLLGARLADAF
SSAVTHVVVAEGGVPTTLSTLQGILSGCWILRFSWVSACQQAGARAAEVEHEAGEGPQRS
RFNRDNLLPGLFDGCFFFLLGSFRRPEKADLLQLIREGGGQVLSRQPKPDSDVTQTLSAA
AYHAQPGSDQALCTQYILYEPQGAYRPSRVRLGKVWSAPVSWLLDCISAFQLLPVPGLEP
ASAP
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaatacttggcagaaaacgaaggaagcagtcaaagatttccggaaacttcta
cagtgctcgaaatgcttcaaactgatgagagagccgctgtgtctgggaacatgtgagcat
atgttttgcaagtcttgtgcaggggcctgcgcgggtggtgaatgcagcgtgtgttcctgc
cctgcctgggtaaaagacatccagatcaacaggcaacttagtaacatcaccgatctcttt
cgcaatcttgaggcacttcttactcctcctggactctcagctatgcctccagctgaaccc
tgcgaggcggcggaggtgagccccattgtcaagcgcaagaagaagtaccgcatctggacc
agccccagaagccaccgcatacgctgccgggtggagagccgcggggaggtcaccctcgtc
cccgccgacccggccccggatccccccaggtcccagagggccttgttcccaccccaggac
gcgtccgtgtacaacttccccgcctcctcccaggactcgggctcgtcctcgccctcgagg
acggcgagcagcggtggcaacaagaggaaaaggaagccggcgaaaaacacccgggtgcgc
caggcggtggcgcgtgctcagatgaccgtcaccaggaagcagaagataaagctgcagctc
caggtcatcaaccagcagtggggcgtcggcaccgacgcggaggccagcgctcctgaggag
agactgcaggagggcgaggggggaggggatgggggtgagcgagagggcaagaggcccaag
aagagagtgtctttccaaagcctcgacgctcccctccccgaggatcatccgaaagaaaac
gctcccccttcggagaatcttgtcacagtgcggtctgccatgtcagacacaggtctgctc
agtggaccggccactgctcctccagaatccattaagcagccggccagcccggcgcctaag
ctctctccctgcaggacgcccaagagggctcgctcggcagggggaggtgtggagccgcag
agatcgcccaagcggccgaggacctcgcctggcggggggaggcggctggcggcaggagac
ggcctctacgccctgtccacccctccgccgtcgccgcaggccctctcctcgccccgtggc
agccccggaggatccgggcgtgagccgggcttaagcccgggaccttcacccgccggcggg
aggaggtctcaggggcgcctgagccaaggcagccctgccttcgccaagaggaaccacaaa
ggggagacgccgcttcacctggcggccatcaagggagacgtagaagctgtgaagaggctg
ttggagcagggtgctgaccccaacttgaaggataatgctggctggacagcactgcacgag
gcgagcaaccacggccacgtggcgctggtggaggctctgatcctgggcggcgcgctgctc
aacacccccggctaccagaacgactcgccgctccacgacgccgtcaggaacggccacgcc
gccgtcgccaagctgctgctggagcacggcgcctcccagagcgtgctgaacatgtttggc
ctgcgagcgctggactgtgccgagacggacgacatgcgccacatcctgctgggggcgtcc
gagagaggccatcatcccttaaactcccccctcagtcctccagccagcctcagcaagacg
ggcggctgtgggcagaaggacggccgcgtcaccctcctcgggagcaagctgacccagccg
cagcgccgacagctggcccaggcagcgcggcttctgggagcgaggctggccgacgccttc
tccagcgcagtgacccatgtggtggtggcagagggcggagtgcccaccacgctgtccacc
ctgcagggcatcctcagcggctgctggatcctccgcttcagctgggtgagcgcttgccag
caggcaggtgcccgggctgccgaggtggagcatgaggcgggagaaggaccccagcggagc
cgcttcaaccgagacaacctgcttcccgggctctttgacggctgcttcttcttcctgctg
ggctccttccggcgtccggagaaggccgacctgctgcagctgatccgcgagggagggggt
caggtcctgagcaggcagcccaagcccgacagcgacgtcacgcagaccctgagcgccgcc
gcctaccacgcccagccgggctccgaccaggccctctgcacccagtacatcctctacgag
ccccagggcgcctaccggccctcccgcgtacgcctcggcaaggtgtggtcagctcccgtc
agctggctgctggactgcatctctgccttccagcttctgcctgttccagggctagagcca
gcgtcggcaccctga
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