Sardina pilchardus (sardine): 134078006
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Entry
134078006 CDS
T10667
Symbol
nyx
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
spil00535
]
134078006 (nyx)
Proteoglycans [BR:
spil00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
134078006 (nyx)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
134078006
NCBI-ProteinID:
XP_062389621
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Position
4:14522551..14525816
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AA seq
467 aa
AA seq
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MVSSLLLPHALALWACTRSCPPRCTCTEEKNCSVLCDRSALGDLPKEFPCEASAINLDKN
NLKFLAERAFGTLPSLRVLSLDHNNISFITPGAFKGLPNLVELRMANNEYISYLHTRTFT
SLRRLVRLDMSNCNLFNMPDRIFIEQIDLRELFCFQNMFRRVPSSLRDMENLTHVYLERN
KIEAVAYNSLLGLLNLKYLNLQENRISVIHDNSFQDLRKLENFYLNDNLLFELPQYTFRG
LVSLKMLNLGGNFLSNVSRTWFGDLVELEVLYLDRNRLLFIEEGAFENLTSLITLHLNSN
NLTILPLPTFQPIYFVGHLYLFRNPWECDCGLEWLKEWKENYKLVRDIPCASPSSVAGLD
LSEVVYTRINGTCIDPGERNLTTAAPEISTTESKLNSLISKLLQQELKEEATNSSEIFRN
GTAAESQVSAGTRLRGPGQWLLLFLFACLLVGQSGTSVVFSHLGDRP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcctccctcctcctgccccacgcgctggccctgtgggcgtgcacgcgctcctgc
ccgccccgctgcacctgcacagaggagaagaactgcagcgtgctgtgtgaccgctcggcc
ctgggcgacctgcccaaggagttcccctgcgaggcgtcggccatcaacctggacaagaac
aacctcaagttcctggcggagcgcgcgttcgggacgctgccgtcgctgcgcgtgctctcc
ctggaccacaacaacatctccttcatcacgccgggggcgttcaagggcctgcccaacctg
gtggagctgcgcatggccaacaacgagtacatcagctacctgcacacgcgcaccttcacc
tctctcaggcgcctggtgcggctggacatgtccaactgcaacctcttcaacatgcccgac
cgcatcttcatcgaacagatagacctccgcgagctgttctgcttccagaacatgttccga
cgtgttccgagctccctccgggacatggagaacctgacgcacgtgtacctggagcggaac
aagatcgaagcggtggcctacaactccctgctgggcctcctcaacctgaagtacctgaac
ttgcaggagaaccgcatcagcgtcatccacgacaactccttccaggacctgcgcaagctt
gagaacttctacctgaacgacaacctgctcttcgagctgccccagtacaccttcaggggc
ctcgtctccctgaagatgctcaaccttggcgggaacttcctctccaacgtatcgaggacc
tggtttggcgatctggtggagctagaggtgctttacctggaccgcaatcgcctgttgttc
attgaggagggcgcgtttgagaacctcaccagcctcatcacgctgcacctcaacagcaac
aacctcaccatcctgcccctccccaccttccagcccatctactttgtcgggcacctgtac
ctcttccgcaatccctgggagtgtgactgcggtcttgagtggctcaaggagtggaaagag
aactacaagctggtgcgggacatcccctgcgccagcccgtcttccgtggccggccttgac
ctcagcgaggtggtgtacacccgcatcaacggaacctgcatagacccgggagaacggaac
ttgaccacggctgcaccagagatctccaccacagagagcaaactcaacagtctcatctct
aagctgctccagcaggaactcaaggaggaggccacaaactcctcggagatcttccgcaac
ggaaccgcagccgagagccaggtgtcagccggaacacgccttcgtggccctggccaatgg
ctgctgctgttcctgtttgcttgtctgcttgttggccagtcaggcacctcggtggtgttc
tctcatcttggtgacaggccttga
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