Sardina pilchardus (sardine): 134078014
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Entry
134078014 CDS
T10667
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134078014
04121 Ubiquitin system [BR:
spil04121
]
134078014
Transcription factors [BR:
spil03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
134078014
Ubiquitin system [BR:
spil04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
134078014
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
ZBED1_RNase-like
ZBED1_RNase-like_helical
FAM200-ZBED5_RNase-like
DUF8247
DUF8054_M
FHY1
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
134078014
NCBI-ProteinID:
XP_062389627
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All DBs
Position
4:complement(15883485..15886033)
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AA seq
588 aa
AA seq
DB search
MTRSKLHNHSSKLVTSASPAPVRASVNRAEGIKLQENRMAEASRPSTSGAATGPKAQQQS
IVSSFAAITPYDKQSKRNRAITHAVSFCLAKDMMPLSTVEQTGFKYMLNVLDQRYEIPGR
KYFSQTAIPRLYEKCRSKLETRLQDVKHFATTSDLWSSRTSEPYLSLTIHYIDEEWALQS
TCLQTVYFPDNNTAEIICQGLEDALESWGLSEDRQVCITTDSGANVVKAVALKGWTRLQC
FGHRLNTAIEGSMKDRRIDRAVSVCKKVVSAFSYSWKKKRALATAQNDLELPKHRLITES
PTRWGSRHAMIARVLEQEKAIAKVLSADRKSRHLVPTWQDVEVLESVHKALNPLADFTDA
LSGEAYVSVSCVKPVLQLFNEEVLKPEDDDTELTKDIKTAVITYLNEKFSDDATDDLLSM
ATLVDPRFKTHYIQADKIEAVRANAVSQILDEWNSSQSSSSPNVQSEASTSAAPVIHKKT
LGSFFKRPVATAGLTDHQAVEAELNSYLQSANADSENNPLEWWKTHCTAYPKVSLLAKRY
LCIPATSSPSERAFSTGGNIVTCHRTALKPDAVDRLVFLAKNLTIDPE
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcagcaagttgcacaaccatagcagtaaactagtcacatctgcctcccctgca
cctgtgcgagcaagtgtgaacagagcagagggaataaagctacaagagaacagaatggcc
gaagcaagcagacctagtaccagcggtgcagccacaggaccaaaagcccaacaacagtca
attgtgtcctcctttgcagccattacgccgtacgataaacagtccaaaaggaatagagct
ataacacatgcagtctctttttgcttagccaaggatatgatgccgctctcaacagttgag
caaactggctttaaatatatgctgaacgtgctggaccagaggtacgaaatccctggcaga
aaatatttttctcagactgccatcccacggctttatgaaaaatgccgtagcaagttagaa
acccggctccaagatgtcaagcatttcgcgaccacctctgacctgtggtctagtcgcacg
tctgagccctatttgagtctgacgatacactacattgatgaggagtgggctctgcaaagc
acatgcctgcagactgtgtattttccggacaacaacacagccgaaataatttgccaggga
cttgaggatgcgctggaatcttggggccttagtgaagaccgacaggtgtgcatcaccaca
gacagcggtgcaaacgtcgtcaaggccgtagctctgaaaggatggactcgcttgcagtgc
ttcggtcaccggctaaacacagctattgagggcagtatgaaggaccggagaattgacagg
gctgtcagtgtttgcaagaaagtggtcagtgccttttcttactcgtggaaaaagaaaaga
gcactagcaactgctcaaaatgacctggagctccctaaacacaggttaatcaccgaatct
cctaccaggtggggttcccgtcatgccatgatagcgcgagtactggagcaggagaaggct
attgcgaaagtgttgtctgctgacagaaaaagcaggcacctcgttcccacatggcaggat
gttgaggtattggaatctgtccacaaggctctaaatccacttgcagacttcactgacgcc
ctttctggtgaagcgtatgtcagtgtctcatgtgtgaaacctgtacttcagcttttcaat
gaggaagtcttgaagccagaagatgatgacacagagcttaccaaggacatcaagactgct
gtcattacatatttgaacgagaaattcagtgatgatgctactgatgacctcctaagcatg
gcgacccttgttgatcctcgctttaagacccactacatccaggctgacaaaatagaggct
gtgcgggccaatgccgtctcacagatactggacgaatggaacagctcacagtccagctct
agccctaacgttcaatcagaagcatcaacttcagctgcaccagtcatccacaaaaagaca
cttggcagctttttcaaaaggccagttgctactgctggcctcacagaccaccaggctgtt
gaggctgaactgaacagttacttgcaatctgcaaatgcagacagtgaaaacaatcctctg
gaatggtggaagacccactgcacagcatatcccaaggtgagccttcttgcaaagcggtac
ctttgcatacctgccactagctcgccctcagagagagcttttagcacaggtggcaatatt
gttacctgccacaggacagctttaaagccagatgctgtggacagacttgtctttctggcc
aaaaacctcacaatagatcctgaatga
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