Sardina pilchardus (sardine): 134078084
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Entry
134078084 CDS
T10667
Symbol
dbr1
Name
(RefSeq) lariat debranching enzyme
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spil03041
]
134078084 (dbr1)
03009 Ribosome biogenesis [BR:
spil03009
]
134078084 (dbr1)
Spliceosome [BR:
spil03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
134078084 (dbr1)
Ribosome biogenesis [BR:
spil03009
]
Eukaryotic type
90S particles
RNase
134078084 (dbr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
134078084
NCBI-ProteinID:
XP_062389729
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All DBs
Position
4:3369384..3400859
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AA seq
563 aa
AA seq
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MKIAVEGCCHGELDKIYETIRYLEDKEDLKVDLLLCCGDFQAVRNEGDMKCMAVPTKYRQ
MQTFYKYYSGEKKAPILTIFIGGNHEASNHLQELPYGGWVAPNIYYMGYAGVVRYKGIRI
GGLSGIFKSHDYSKGHYEFPPYSPETLRSVYHVRSIDVFKLKQIQMPMDVFMTHDWPQGI
YHYGCMQELIRKKKFLQQEVESSTLGSPAAAEILAHLKPSYWFSAHLHVKFAAHVEHEAQ
GHNTPRTTKFLSLDKCLPHRDFLQVLELAERPGSSEQLEYDPEWLAILKATDGLQKVSPS
TWLPPEDNGLHAKWDFTVAEADMMEVVSDLGGDLCVSENFSLTVPSYDPIHPQPYTQPSY
QINPQTTEMCATLGLTDIYAQAGQTSQLRQRARREDEDNLGSFEEFPSNPADTSELSGSY
NPDEISIEDEWDEDKGEEDGIAGEKVTDGAALERAVGVEEIDREYSSLPSGSLILPDPLS
TKAEVVIQSPGSLSLQLPLPTQSTCNSQNLPPTDLQGEWDTQPPKVHKRCSDEKDVGKDG
TIKIKRRNQTIYLAKDDHEDEEN
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgctgtggagggttgctgtcatggtgagctggacaaaatctacgaaaccatt
cgttatctagaagataaagaggacctcaaggtggacctgctactttgctgtggggatttc
caggcagtacgcaatgagggagacatgaagtgcatggccgttccaactaagtatcggcaa
atgcaaactttctacaaatattattcaggtgaaaagaaagcccctatcctaaccatcttt
attggtggaaaccatgaagcttccaatcatcttcaagagcttccgtacggaggctgggta
gctcctaatatctactatatgggctatgcaggtgttgtgcgttacaaaggtatccgtatt
ggtggactgtcaggaatcttcaaatcccatgattatagcaaagggcactatgagtttcca
ccttacagtccagagacactgcgtagcgtttaccatgtcagaagcattgatgtcttcaaa
ctcaaacagatccagatgccaatggacgtatttatgactcatgactggccccaaggcatc
tatcattatggctgcatgcaagaactgatcaggaagaagaaattccttcaacaagaggtt
gaatccagtaccctgggtagtcctgctgcagctgagattctggctcacttgaaaccatcc
tactggttctccgcacacctacatgtcaagtttgctgctcatgtggagcatgaggctcag
ggtcacaatactcctcgtactacaaaattcctgtccctggataagtgccttcctcacagg
gactttctacaggttcttgaattggcagagcgaccaggatcttctgagcaactggagtat
gatccagaatggctggctatccttaaagctactgatggcttacaaaaagtttcccccagt
acctggttgcctcctgaggacaacgggctgcatgcaaagtgggacttcactgttgctgaa
gctgatatgatggaagttgtgagtgacctggggggtgacctctgcgtctctgagaatttc
tctcttactgtcccttcatacgaccccatccaccctcagccctatactcaaccatcttat
caaatcaacccacagactacagaaatgtgtgctacccttggactgactgacatatatgct
caagctgggcagactagtcagttgagacaaagagcaaggagagaggatgaggacaacctg
ggcagttttgaggaatttccttccaaccctgccgacacatcagagctgtcaggctcctat
aacccagatgaaatttccattgaggatgaatgggacgaggataaaggagaggaagatgga
atagcaggggaaaaggtaacggatggcgccgctttggagagggcagttggtgttgaggag
attgaccgtgaatacagttctctgccctctgggtcactaatcctcccagaccctctttcc
accaaggctgaagtagtcatccagtccccaggctccctctcattgcagcttcctctgccc
acccagtccacttgtaattcccagaacctgcctcccacagacttgcaaggagagtgggat
acacagccacccaaagtgcacaaacgttgcagtgatgaaaaggatgtaggtaaggatgga
actattaagattaagaggagaaaccagacaatctatttagccaaggatgaccatgaagat
gaagagaactga
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