KEGG   Sardina pilchardus (sardine): 134078130
Entry
134078130         CDS       T10667                                 
Symbol
itga6a
Name
(RefSeq) integrin alpha-6 isoform X1
  KO
K06485  integrin alpha 6
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil04382  Cornified envelope formation
spil04510  Focal adhesion
spil04512  ECM-receptor interaction
spil04514  Cell adhesion molecule (CAM) interaction
spil04518  Integrin signaling
spil04810  Regulation of actin cytoskeleton
spil04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:spil00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    134078130 (itga6a)
   04514 Cell adhesion molecule (CAM) interaction
    134078130 (itga6a)
   04518 Integrin signaling
    134078130 (itga6a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    134078130 (itga6a)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    134078130 (itga6a)
   04810 Regulation of actin cytoskeleton
    134078130 (itga6a)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    134078130 (itga6a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spil04147]
    134078130 (itga6a)
   04515 Cell adhesion molecules [BR:spil04515]
    134078130 (itga6a)
   04090 CD molecules [BR:spil04090]
    134078130 (itga6a)
Exosome [BR:spil04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   134078130 (itga6a)
  Exosomal proteins of breast milk
   134078130 (itga6a)
Cell adhesion molecules [BR:spil04515]
 Integrins
  Integrin alpha subunits
   134078130 (itga6a)
CD molecules [BR:spil04090]
 Proteins
  134078130 (itga6a)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 FG-GAP_2 DUF6768
Other DBs
NCBI-GeneID: 134078130
NCBI-ProteinID: XP_062389799
LinkDB
Position
4:6034427..6050127
AA seq 1094 aa
MGVCGRCWESYIWIFFILPWICVGAFNLDTQNILRKDGEPGSLFGFSLALHRQLEPTDKR
MLLVGAPRAKALAQQMANITGGLYSCDITSQSHDCERVEFDNEADVSVENKENQWMGVTV
QSQGPGGKIVTCAHRYQRRLFGNTRQESRDIIGRCFVLSQDLTIDRLSDEDGGNWKFCEG
RARGHERFGSCQQGLSATFTKDYHYVVFGAPGAYNWKGIVRVEQKNNTLLEMGLYDDGPY
EVGDENRLDPLLVPVPANSYLGFSLDSGHSIIRKGELTIVSGAPRTNHSGAVVLLRKEGE
VSTMLSPEFILEGPGLASSFGYDVAVVDLNNDKWQDIVVGAPQFFLKDGEVGGAVYVYIN
KAGRWNDIIPIRLNGTKDSMFGLAVENIGDINLDTFQDIAVGAPYDDDGAGKVYIYHGSA
NGIITKPAQVLKGRQHNIKLFGYSLAGNMDLDQNSYPDIAVGSLADAVFVYRARPVISIK
KNVTVTPKKIDLTRKTCGNSICLTVEACFSYKANPSTYSPRITISYLFEAESVRRKQGLK
SRVTFLKKADSDQDFQSSGKLDLRGQNKKTCFKSELRLQDNIKDKIRAIPIEVSVAIQSS
KRGKRQSALPQLIPVVNSSDSSKVLAEVHFLKEGCGTDNICQSNLELQYRFCYREAKQDV
FPPLPLQNGVPLISLSDQKDIALELTVTNRGGDDAYEARLVGMFPSSLSYSAFRSQKTGD
KQVICAANQNGSQAECELGNPLKRDAELKFYIILSTAGISLNTTEIAINLLLETTSQQER
QVTVEAKAKVVIELMLSVHGGPKPNQVYFGGDVKGESAMKYVEDIGSLIVYEFRIANRGR
PLTSFGTASLNIQWPKENSVGKWLLYLVDIEAEGLDQIKCSPETEVNYHKLIKESKPSRK
KRAVEERKTREGGGLSSLFAEKRKYKTLSCNNEVKCVEIKCPLLGLDNTAVIRLRSRLWN
ATFLEDYATLSYLDLMVKASLSLDVSTQNIILRDAETEMKLTVFPEKTVALYSGAPWWII
LVAVLAGILMLALLVFLLWKCGFFKHAKYEDTVPKYHAVRIRKAPKQFKDGKIQLSPFEK
KQWMTTWTDDESYS
NT seq 3285 nt   +upstreamnt  +downstreamnt
atgggggtttgtggaagatgttgggaaagttatatatggattttctttatcttaccatgg
atttgtgtcggagctttcaatttagatactcaaaatatcctgaggaaggatggggagccc
ggtagcctctttggattctctctcgccctgcatcgccagttagaaccaacggacaaaaga
atgctgctggtcggagctcccagggccaaggctttggctcagcagatggccaacatcact
ggaggcctttatagctgtgacatcacgtcccagtcacatgactgcgagcgcgtcgagttc
gataatgaagccgacgtgagcgtggagaacaaggagaaccagtggatgggggtgacagtg
cagagtcaaggaccaggaggcaagattgtgacttgcgctcatcgctatcagaggaggctt
ttcgggaacacgcgacaagagtcgcgcgacatcatcggtcgctgcttcgtcctgagccaa
gacctgaccattgaccgcctgtcggatgaggacggcgggaactggaagttctgtgagggc
cgagcgaggggccacgagagattcggctcttgccagcagggcctctctgccacctttacc
aaagattatcactatgtggtctttggagccccaggcgcctacaattggaaaggcatcgtg
cgggtggagcagaagaacaacaccctgctggagatgggcctctacgacgacgggccgtac
gaggtcggcgatgagaaccgattggacccccttcttgtgccagtgcctgcaaacagctac
ctggggttttcgcttgactccgggcacagtatcatcagaaaaggagagctaactattgtg
tctggggccccaagaactaaccacagtggggctgtagttcttctaagaaaggaaggcgaa
gtgtccaccatgctctccccagagttcattctagaaggccctgggctggcatcctccttt
ggatatgatgttgctgtggtcgacctgaataatgataagtggcaggatattgttgtggga
gctccgcagtttttcctgaaagacggcgaagtgggaggagctgtgtatgtttacatcaac
aaggctggcaggtggaatgacatcatcccaatccgtctcaatggaaccaaagactccatg
tttggcttggctgtggaaaacattggagacatcaacctggacacctttcaagacatcgct
gttggtgctccctatgatgatgacggggcaggaaaagtgtatatttaccacggctccgct
aatggaatcatcaccaaacctgcacaggttctcaaagggagacagcacaacattaagtta
tttggatactctctagctggaaacatggaccttgatcaaaattcttatcctgatattgct
gttgggtccctggcggatgcagtgtttgtttatagggccaggccagttataagtattaaa
aagaatgtgaccgtaacaccgaagaagattgacctgacaaggaagacctgtgggaacagc
atatgcctcacagtcgaagcttgcttttcctacaaagccaatccttcaacatacagccct
agaatcactatttcctacctgtttgaggcggaatcggtacggcggaagcagggacttaaa
tccagagtgacattcctaaaaaaggcagactcggatcaagacttccagtccagtggaaaa
ctggatctccgaggacagaacaagaagacatgctttaaatccgaacttagacttcaggac
aacattaaggataagatcagggccattcccatcgaggtgtccgtggccatccagagcagc
aagcggggcaagaggcagagtgctctacctcagctcatccctgtggtgaattcgtccgac
tcaagcaaggtcctcgcggaggtgcacttcttgaaggaaggatgtggaactgacaacatc
tgccagagcaacttggagcttcagtacagattttgctaccgcgaagctaagcaggatgtg
tttccccctctgcctttgcaaaatggtgttccactgatctcgctgagtgatcagaaggac
atcgctctggagctgacggtgactaacaggggtggggacgacgcctatgaggccaggctg
gtggggatgttccccagctcactgtcctactctgccttccgctctcaaaagactggggat
aagcaagtcatttgtgcagcaaatcaaaatggctctcaagctgaatgtgaacttggcaat
ccactcaaaagagacgcagagctgaagttctacatcatattgagcacagcaggcatctcg
ctcaacaccactgaaatcgcaatcaatcttctccttgaaacaaccagtcagcaggagagg
caggtcacagtggaggccaaggcaaaagttgtgattgagctgatgctgtctgtccatggg
gggcccaagcctaaccaggtgtacttcggtggtgatgtcaaaggggagagcgccatgaaa
tatgtggaggacattggctctttgattgtatacgagttcagaattgccaaccgtgggagg
cctttaacgtcctttggcacggcttcactaaacatccagtggcctaaagagaactctgtg
gggaagtggcttttgtatctcgtggatattgaggcggagggcttggatcagatcaaatgc
tcaccggagacagaggttaactatcacaaacttattaaggaatcaaaaccgtcccggaag
aaacgtgctgttgaggagcgcaaaacaagggaaggaggagggctcagttctctgtttgct
gaaaaaaggaaatacaaaacactgagctgcaataatgaagtcaaatgtgtggagatcaag
tgccccctgctgggcttagacaatactgcagtcattcggctgaggtcccgtctctggaac
gccacattccttgaagactatgccaccctcagctatctagatttgatggtcaaagcatca
ctcagccttgatgtatccacacagaatattatcctgagagatgcagaaactgagatgaaa
ctcactgtgttcccagagaagacggtggctctctacagtggagccccctggtggattatc
ctggtggcagtgcttgcaggcatcttaatgctggctctactggtgttcttgctgtggaag
tgtggatttttcaagcatgccaaatatgaagacaccgtgcccaaataccacgctgtgcgt
atacggaaagctccaaaacaatttaaggatggaaagatccaactaagtccttttgagaaa
aagcaatggatgaccacatggactgacgatgagagttactcttaa

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