Sardina pilchardus (sardine): 134078211
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Entry
134078211 CDS
T10667
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
spil Sardina pilchardus (sardine)
Pathway
spil05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134078211 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134078211 (pou2f1b)
03021 Transcription machinery [BR:
spil03021
]
134078211 (pou2f1b)
Transcription factors [BR:
spil03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
134078211 (pou2f1b)
Transcription machinery [BR:
spil03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
134078211 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
134078211
NCBI-ProteinID:
XP_062389947
LinkDB
All DBs
Position
4:complement(7796903..7812000)
Genome browser
AA seq
743 aa
AA seq
DB search
MADGGAASQDESSGPDSKMSNPSESSKCAMESGDGNTGAQTNGLDFQRQTVQTTNAITNA
HAQALLQQCKTEEVDEPVASSQTGPLPQTQLMLAGGQIAGLTLTPAQQQILLQQAQAQLL
AAAVQHSASQQSSTSGANISASAATPITQIPLSQPIQITPQLQQLQQQNPNLQQFVLVQP
GLPIATQLQPAQFIISQTPQGQQSLLQASNLLTQLPQSQANLLQTQPSITLATQPATPTR
TIAATPIQPLPLTQSTPKRMDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG
KLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAVCAENLTSDQALSSPSSLGSP
GLGMEGLNRRRKKRTSIETNIRVALEKSFLEQNQKPTSEEITMIADQLNMEKEVIRVWFC
NRRQKEKRINPPSSGSSGTTPIKAIFSPSNPLVSSTASLVSSNTPTTLTVNPALPLTSTS
VSGLTFTGKMPFNFTGTTITAAPTNTASVISATPTLVTTAAAASSPSLSPSPTGASLQTS
VGDSGGGPHEGSGGSVVSHVPTPACTLASALSSGQVMVAAPGLSAALQGAQLPTSASLAA
MAAAAGLNPGLMASSQFTPGGALLSLAPGSLGSALSPALMSNSTLATIQGVWSALASSGT
LPITSLDGSGNLLFANASAGSTPNLVTAPLFLNPQNLSLLASNPVSLVSAGGANLQLTAD
AHQSVVTTAAMPASTISTASKAQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggaccagattctaaaatgagt
aatccgtctgaatcgagtaaatgtgcaatggagagtggcgacggaaacacaggtgcccaa
acaaatggactggactttcagagacagacagtgcagacaacaaacgcaatcaccaacgca
cacgcacaagctctgctccaacagtgtaagacggaggaggttgacgagccagtggcctca
agccagacggggccgctgcctcaaacccagctcatgctggccgggggacagatcgctgga
ttgaccctgactccggcgcagcagcagatattgctgcagcaggcccaggctcagttgctg
gcggcggccgtgcagcactcagccagccagcagagcagcaccagcggggccaacatctct
gcctccgcagccacacccatcacccagatccccctgtcccagcccatccagatcacgcct
cagctgcagcagctgcagcagcagaaccccaacctgcagcagtttgtgctggtgcagccg
ggcctgcccatcgccacccagctgcagccggcgcagttcatcatctcccagacgccgcag
ggccagcaaagtctcctgcaggcctccaacctactaacacaactacctcaaagccaagcc
aacctcctgcagacccaacccagcatcaccctcgccacccagcccgccaccccgactcgc
acgatagcagctacccccatccagcccctgcccctcacccagagtacaccaaagcgcatg
gacacacccagtctggaggagcccagtgacctggaggagcttgagcagtttgccaagacc
ttcaagcagaggagaatcaaactgggcttcactcagggggacgttggccttgccatggga
aagctttatggcaatgacttcagccaaaccaccatctctcgatttgaggccttgaacctg
agctttaaaaacatgtgcaagttgaagcctctgctggagaagtggctcaacgatgcagtg
tgtgcagagaacctgacgtctgaccaggccctgtccagccccagctccctgggctcccca
ggcctgggcatggaggggctgaaccgccggcgcaagaagaggaccagtatcgagaccaac
atccgcgtggccttagagaagagctttctagagcagaaccaaaaacctacctctgaggag
atcaccatgatcgccgaccagctcaacatggagaaggaggtgatccgcgtgtggttctgc
aaccgccggcagaaggagaagaggatcaacccccccagcagcggcagcagcggcaccacc
cccatcaaagcaatcttctccccctccaatcccctggtgtccagcacggcgagccttgtg
agcagtaacacaccgaccacactgactgtaaacccagctttgcctctcaccagcacgagt
gtctctggcctcaccttcactggtaagatgccattcaacttcactggcacaaccatcact
gcggcccctaccaacacagcctctgtcatctctgctacaccaaccctggtcactacagca
gccgctgccagctcgccatcactaagcccgtccccgaccggggcatcactgcagacgtct
gtcggagactcgggcggcgggccgcatgagggttctggcgggagcgtggtgtcccacgtc
ccgaccccggcctgcacgctggcgtcggctctgagctcgggccaggtgatggtggcggcg
ccagggctctcggccgctctgcagggcgcgcaactccccaccagcgccagtctcgccgcc
atggccgccgccgcaggcctcaaccccgggctcatggcctcctcacagttcactcctggg
ggggccctgttgagtttggcaccaggtagtttgggcagcgccctgagtcctgcactgatg
agcaacagcaccttggccactatccaaggtgtgtggagcgcgttggcctctagtggaact
ctgccgatcacttctctggatggcagtgggaacctgctgtttgccaatgccagcgcgggc
agcacgcccaacctggtgacggcgccactcttcctcaatccgcagaacctgtcgctgctc
gccagcaatcctgtcagcctggtatctgccggcggtgccaacctgcagctcacagccgac
gcccaccagagcgtggttaccacggccgctatgcccgcctccaccataagcaccgcctcc
aaggcacagtaa
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