Sardina pilchardus (sardine): 134078271
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Entry
134078271 CDS
T10667
Symbol
spopla
Name
(RefSeq) speckle-type POZ protein-like A
KO
K10523
speckle-type POZ protein
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
134078271 (spopla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spil04121
]
134078271 (spopla)
Ubiquitin system [BR:
spil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
134078271 (spopla)
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
DUF7810
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
134078271
NCBI-ProteinID:
XP_062390054
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Position
4:10338926..10349085
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AA seq
392 aa
AA seq
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MSRVPTPPPPGEMSVGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNMNVLK
VPECQLADDLGNLWECSRFTDCSLHVRGQEFKAHKSILAARSPVFNAMFEHEMEESKKNR
VDISDVDPEVFKEMMGFIYTGKAPNLEKMADSLLAAADKYALERLKVMCEEALCNSLSVE
NVADTLILADLHSAEQLKAQAIDFINRCSILRQLGCKDGKNWNSNHAADIMETAGWKSMI
HSHPHLVAEAFRALASAQCPPFGLPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgggtccccaccccccctcctcctggggagatgtccgttgggcctgtggcggag
agctggtgttacacccaggttaaagtagtgaagttttcctacatgtggaccataaacaac
ttcagtttttgccgagaagagatgggagaggttttaaaaagttccaccttttcctcgggt
cccaatgacaaaatgaaatggtgcctgcgagtcaatcccaagggacttgatgatgaaagc
aaagattacttatctttgtatttacttcttgttagttgtccaaaaagtgaagtgagggca
aagttcaaattttccttactgaacgcaaagagggaagaaactaaagctatggaaagccaa
agagcatatcgatttgtgcaagggaaagactggggtttcaaaaaatttattaggagagat
tttctgctcgacgaagcaaacggactcttaccggacgacaagctcactcttttctgtgag
gtgagcgtggtccaggactcggtgaacatctctggccagtccaacatgaacgtgctgaag
gtgccggagtgccagctggctgacgacctggggaacctctgggagtgctcacgctttact
gactgcagcctccacgtcaggggccaggagttcaaagcccacaaatccatcctggcagca
agatcaccggtctttaatgccatgtttgaacatgaaatggaagaaagcaaaaagaatcgc
gtagacataagtgatgtagaccctgaagtgttcaaagagatgatgggcttcatctacacg
ggaaaggcgccaaacctggagaaaatggcggacagtttgttagcggctgcagataagtat
gctctggagcgcttaaaggtcatgtgtgaagaggctctgtgcaacagcctctcggtggag
aatgtggccgacacactcatcctcgcagatttgcacagcgcagagcagctcaaagcacaa
gccatagattttatcaacaggtgcagtatcctcagacagctgggctgcaaagatgggaaa
aactggaatagcaaccacgccgcagacataatggaaactgcgggctggaagtcaatgatc
cattcccaccctcacttagtggcggaggctttccgcgcactggcgtctgcccagtgccca
ccctttggcctgcccaggaaacgcctaaaacagtcctga
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