Sardina pilchardus (sardine): 134078293
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Entry
134078293 CDS
T10667
Symbol
sorcs3a
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134078293 (sorcs3a)
Membrane trafficking [BR:
spil04131
]
Endocytosis
Others
Others
134078293 (sorcs3a)
Endosome - Lysosome transport
134078293 (sorcs3a)
Endosome - Golgi transport
134078293 (sorcs3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
SusE
Motif
Other DBs
NCBI-GeneID:
134078293
NCBI-ProteinID:
XP_062390100
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All DBs
Position
1:complement(34159850..34399421)
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AA seq
1085 aa
AA seq
DB search
MFSDSSAERKNPGPLLEEQKLRSEPRWNRDDAKVTSTKQDEPKLTSSTFALTGDSAHNHA
VVYWSGQNSSVSHTISLLSRGCEFNTEVLSSSSKWRSTDYGTTYEKLNDKVGVKTVLSYL
YVCPTNKRKIMVLTDPEFESSVLISADEGASYQKYRLSFYLLSLLFHPAQEDWALAYSHE
QKLYSSVDFGRKWQLVHEAVTPNRFYWSVIGLDKETDLVHLEANTPDGRAQYVTCRAQSC
SETSRHYPFAGYIDTNSLVVQDDYMFIQVTSAGRAWYYVSYQREAFMRIKLPKYSLPKDM
HIISTDEGQVFAAVQEWNQNDTYNIYISDPTGIFFTLALENVKASRGLGGNSMIDLYEVA
GIKGMLIANRKLENQVKTYITYNKGRDWRLLQAPTSDLEGNDIHCVLPFCSLHLQLQMSE
NPYLSGSIISKSSAPGVIVATGNIGPELSYNNVGMFISSDAGNNWRQIFEEEHNVWFLDT
AGALLAVKQPTVPTRHLWVSFDEGRQWDVHSFSMVPLFVDGVLVESGMDSQIMTFFGHFS
HRSEWQLIKIDYKSLFSRRCTEGDIQTWHLHNQGEPCVMGQKQIYMKRRPGNHCMLGRDY
VRVLSAEPCVCRAHDFECDYGYERRGDGNCSPSFWYNPATVSRSCSHGQNYLNSTGYRKV
AANNCTKGVKEMYTPRRQQCPTRAPRGLQLSTGEEEKLTAPLASNVTFLVQLQEGDSMRT
HIQLDFGDGTAVSYSNLTWAEEGIKHMYRSAGIFRVTAMAENEMGADSTSLYLHVTCAVE
QVQLLAPFVVIRNKEVNLTAMVGPSQSRTLTYFWWLGNSSEPIVTLDGSISHTFTSEGMH
TVTVQVSSANSILQDTKTIAVQEFFKSLLLSFSPNLDEVNPDIPEWRQDVGRVIKKALLQ
IADIPEKQLLVAVFPGIPTAAELFLLPSKNQSKGRKENEEELEQISEVLVSALNQNLVEF
ELKPGSRIIVYITQLTLAPLVDSSPRHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWINI
YAEVNHEKEQEMINTVGQSETAPKITLSEFPTQKELMEKELECRVKRGMANTCESTREIP
NCTSV
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtgactcatccgccgaaaggaagaacccaggtccgcttttggaggagcagaaa
ctgaggtccgagccccggtggaacagggacgacgcgaaagtaaccagcaccaagcaagac
gagccgaaactaacaagcagcacttttgctctgaccggagactctgcccacaaccacgct
gtcgtgtactggtctgggcaaaacagcagcgtaagtcatacgatttctttactttcacgt
gggtgtgaatttaacacagaagtgttgtcttccagttcaaaatggcggtcgacggattac
gggacgacttacgagaaactcaacgacaaagtcggagtgaagactgtcctcagctacctg
tacgtgtgcccgaccaacaagaggaagataatggtgttgaccgatccggagtttgagagc
agcgtgctcatcagcgcggacgagggggccagctaccagaagtaccgcttgagcttctac
ctcctgagcctgctcttccaccccgcgcaggaggactgggccttggcctacagccacgag
cagaagttgtacagctcggtcgatttcggcaggaagtggcagcttgtccatgaagcagtg
acgcctaacagattctactggtccgtaatcggcctggataaggagactgaccttgtccac
ctggaggccaacacacctgacggacgtgctcagtatgtgacctgccgagcgcagagctgc
tcggagaccagccgccactacccgttcgctggctacatcgacaccaactcgttggtggtc
caggacgactacatgttcattcaggtcacctctgctggccgggcgtggtactacgtctct
tatcagagggaggccttcatgagaattaaactgcctaagtactcccttcccaaggacatg
cacatcatcagcacagacgagggccaggtctttgccgccgtgcaggagtggaaccagaac
gacacgtacaacatctacatctccgacccgacgggcatcttcttcaccctggccctggag
aacgtcaaggccagccgcgggctcggaggcaacagcatgatcgacctgtacgaggtagcg
ggcattaaggggatgctgatcgccaaccgcaagctggagaaccaggtgaagacctacatc
acctacaacaagggccgcgactggagactgctgcaggcgcccaccagtgacctggagggg
aacgacatccactgtgtcctgccgttctgctccctgcaccttcagctgcaaatgtcagag
aacccgtacctctcaggaagcataatcagcaagagctcggcaccgggggtcatcgtggcc
acaggaaacatcggtccggagctctcctacaacaacgtgggaatgttcatatcctccgac
gcagggaacaactggaggcagatctttgaagaagagcacaatgtctggtttttggacaca
gcgggtgccttgctcgctgtcaaacagcccacagtaccaaccagacatctctgggtgagc
tttgacgagggccgccagtgggacgtgcacagcttctccatggtgcccctctttgtggac
ggcgtgctggtggagtcgggcatggacagccagatcatgacgttttttggacattttagc
catcgatcggagtggcagctcattaagattgactacaagtcgcttttctccagacggtgc
acagagggtgacatccagacctggcacctccacaaccagggtgaaccgtgtgtgatgggc
cagaaacagatctacatgaagcgtcgcccgggcaaccactgcatgctcggccgcgactac
gttagggtcctgtccgccgagccctgcgtttgccgagcgcacgactttgaatgtgattat
gggtatgagcggcgtggagacggaaactgctcgccctcgttctggtacaacccggccacg
gtgtccaggagctgcagtcacggacagaactacctcaacagcacggggtaccgcaaggtg
gcggcgaataactgcaccaagggggtgaaggagatgtacacgccccgccggcagcagtgt
cccacgcgggcgccccgcggcctgcagctcagcaccggggaggaggagaagctcaccgcg
ccgctcgcctccaacgtcaccttcctggtgcagctccaagagggagactcgatgcggacg
cacatccagctggactttggcgacggcacggccgtgtcctactccaacctcacctgggcc
gaggagggcatcaagcacatgtaccgcagcgccggaatcttccgcgtcaccgcgatggcg
gagaacgagatgggcgctgacagcacctcgctctacctgcacgtgacgtgtgctgtggag
caagtccagctgctggctccgttcgtggtcatccggaacaaggaggtgaacctgaccgcc
atggtcgggcccagccaatcccggacgctcacctacttctggtggctcggtaatagttcc
gagcccatcgtaacgttggacggcagcatctcccacaccttcaccagcgagggcatgcac
acggtcaccgtgcaggtgtcctcggccaactccatcctgcaggacaccaagaccatcgcc
gtgcaagaattcttcaaatcgttacttttatctttctcccctaatctggacgaggtcaac
cctgacatcccggagtggagacaagacgttggcagggtaattaagaaggctctgctgcaa
attgccgatattccggaaaaacagctcctggtcgcggtgtttcctgggatcccgaccgcc
gccgagctgttcctcctgcccagcaagaaccaatccaagggccggaaagagaatgaggaa
gagctcgagcagatttcagaggtcctcgtcagcgccttgaatcagaacctggtggagttt
gagctgaaacccggttctcgcatcatcgtttacatcacacagttaaccttggcgccgctt
gtagactcgagcccgagacacagtagctctgcgatgctcatgctcctctctgtggtgttc
ctgggtttagccgtcttcctcatctataaattcaaaagaaaaatcccctggatcaacatc
tacgccgaggtgaaccacgagaaggagcaggagatgatcaacacggtggggcagagcgag
acggcgcctaagatcaccctcagcgagttccccacccagaaggagctcatggagaaggag
ctggagtgccgcgtcaaacggggcatggcgaacacctgcgaaagcacaagagagattcca
aactgtacaagtgtgtaa
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