Sardina pilchardus (sardine): 134078308
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Entry
134078308 CDS
T10667
Symbol
obsl1b
Name
(RefSeq) obscurin-like protein 1 isoform X1
KO
K19574
obscurin-like protein 1
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spil03036
]
134078308 (obsl1b)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
134078308 (obsl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Ig_6
Ig_5
Ig_4
C2-set_2
Izumo-Ig
BiPBP_C
Adeno_E3_CR1
Ig_C17orf99
C2-set_3
Motif
Other DBs
NCBI-GeneID:
134078308
NCBI-ProteinID:
XP_062390117
LinkDB
All DBs
Position
4:complement(10967245..11003071)
Genome browser
AA seq
2708 aa
AA seq
DB search
MDVFGGAPRFLAYPRPVVVQTGTDGVLKCQIGGDPRPAVIWERNNEQIHAEGRYRVFEDG
NVYNLIITGVNSEDSGQYICKAKNCIGETYAAATLKVEGEAQEMELREENKPRFLIKPLS
TRVARGEDAVFSCKLWGNPRPEVVWEKDGRKLNEIFESTHFSVGYQEGGWFQLKIFKTRA
PDGGVYTCKARNEFGEGLAGAVLLVDAGPGHDDDGNRNGYTNGHWKGHQGKQRSGRQVAS
RLKDDPLPNSTKVKMFAVTEGKHAKFRCYVTGKPKPEIIWRKDGRLILSGRRYLLYEDRE
GYFTLKVLYCKQQDNGVYVCAASNTAGQTLSAVHLSVKEPPVRFKQPLCDLQVWERDLAI
LECEVPEDSVPITWYLEDRRLQPGAKYGMEEWGTKRRLTIRDIGVDDDGIYLCEMPDGGR
SIAEVAVKGTIVRKLPRKVDVLEGENAAFCVEVEEEEMDIHWYKEGVELRETHQTILKSF
GRTHILVFVNTTPQDSGLVIFYVGRSKTSSQLRVKAVRHCPPTCPVGVQINTERANAALL
SWVPAPDSRKNPPSGYVLERQEVGSQEWLQCLTTDSATSVEILGDSVPCEADYRFRICSV
NKYGRSGNVEFPRAAHLVPVARIQAPLQDALVPEGQDACFTIELSASVIGTWFLNGTQLQ
DDDRFSMRRTRTHQTLRIRGVRDTDNGAEITFIAYGIRDSAALYIQAPLVKFTPLSEMDR
NKFVEVGNPIVLYCELSDPEAPVHWYKNGVELHSGEGLAIQSEGTMRRIVIQSAEFSHSG
VYSCDAIDDVIRFNVEVEAPPARFSLLPDSERSKSIEVGRPIVLQCELSDPTAQVYWYKD
GTKLQQQSGLSIQTDVNKRTLVVQSAEFCHSGIYNCKAKGDAVQINVDVKAPPVRFTAIP
EAERRKSIEAGCSFMLQCEVSDPTANVLWHKDGTQLSVKSGLAFQSKGSLRTLHIESTEL
SDSGMYSCATEDDAIEFHVEIRAKPVRFAAVSEDEKSKCVEAGCPFQLQCELSDPSGTVC
WYKDGKELLPEMGLDAQADGTMRRLAVLSAEMCHAGQYSCKTSDDSVHFTVEIKAPPVTF
CAIPEDKQRRCIEAGCPFELECEISNPAAHVTWYKDRRELEPQGEIETLSEGAKRKLSVP
AAEVHHTGIYTCKTADDAIRFNVDVKVPSPRFIPLPEVEKNKSVTVGQRIVLKCGISDHN
AEVSWYKDGEQLSGKHGVTMETEGNERKLIVASASLSDSGQYSCAVADDAVSFKVDVQAV
PVRFSALPDVARNKFVEAGCPIVLQCEISDPTAQVSWFKDGNQVLPIGGLDILSEGTFRT
LIIQSAELSHSGAYTCHSEDDRIAFKVDVAAPPVTFAYVPEEDLHKNIVEQECLTLSCEV
SRVDAMTQWYKDGVEVQPDDNTSLQTEGTERKLTIQASQLSDSGTYTCRAGDSVLIFKVN
VREPPVKIVFPKEDVHLDRHVPEEIVLSCELSRPNASVTWFKDGQKLQDSENIKLKTEGP
YRRLKILRSGVEDSGEYVCDTADDRIFFQLNITEPPVRIVSPSQSQMELCQQTAERMVLS
CEISRANAVVRWYRDGLEVEENDNLILEVDGVYRRLIIPETTVKDSAEYVCDTGDDSVTF
FVNIAEPPVRFIRPRKMACGVDVFVGDPILLDCEVSRANAEVTWKKNGEEIEESTKVTIF
EDGLIRQLSILSATLEDAGQYVCDAKDDVMDFHVSVTVPPIQILRKDEIVTKRHIVAPDD
IVLKCELSRSDGTVDWYKDNERVVDSERLSCESEGAFRTLIILNAEIADAGEYICDAKED
KVKFSVTVEEAPVTILGNSEHPEHHSLVAGDDLILECEVSRSNAPVEWYCNGRLLNPDSR
THIESRETVRKLVLTCLELSDAGEYMCDAADDKMIILVRVQEPPTKFLNKEEENKLVTTE
NDKVTLCAKVNKDRAKVRWLKDQEPIIGSRFKTSTEGKNHYLVIDPVKRSDCGRFVCDVS
TDEMDFTVVVKELKVKFSKPLENAIGLKDSDLVLRCELYKPRGDVQWLKDNQEITPSHHF
TIRANGCERSLTIHNVTLEDAGVYSCESRDERTCATVEVQKPRVVEFIAELHNITVMEGE
DATFKCVLSPEDAKLEWCMNGNPIVADEKFTMSSSGLSHTLHIHNCQVGDTSRITAEAEG
VVSKASLRVQEAQVVFTKNMEDVISEEFGEATLEVEVSLESGEVQWMRHGIVIQSGPKFT
LKQTDRKRSLVIHKLVLSDRGTYSCETLHDRTQANLSVEPRKIKIRKGLNEVQTFERETA
SFEVELSHNNVEAVWQKDGIRLKPGTRWRMSSKGRVHGLTISSLTLEDTGTYSLSAENAR
SSARLTVKETPVTLLKKLEDVRFPEASAVTMECELSRHNVEVKWTKDGVELKPGKNHRIY
AMGRKRFLQILRCEIADSGVYMCDVGDTSTSCSLEVYEPELEVIQGLEDLEIQEDENAVF
MCELSLDNIPGEWFKNGEKIKPTSTIRIRQEGTKHFLLICNIKGEDSGEIKFVAKNIEST
ACLEVEELPVNIVQPLQDKTALEKSRVLLDCSVSNPRCSIRWYKGSNVVLPSERFEICSE
GCYRKLVIQQVALEDEGTYSVQVGDYSCSAKLTVEAQSLLMVRELQDVEVVAPDEACFDC
EVSMPVTKAPVWTLNGESLQPGPRVLLEKMGTVHKLTLRQTSVDMTGSVQFTSGKAKSTA
NLVVKSDL
NT seq
8127 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgttcggaggtgcgccccgctttctggcctaccctcgccctgtggtggtgcag
acaggcacagacggcgtcctgaagtgccagattggcggggaccctcggccagcggtcata
tgggagagaaacaacgagcagatccacgcggagggacgctaccgtgtgtttgaggacggc
aatgtgtacaacctcatcatcactggagtaaactcagaggacagtgggcagtacatatgc
aaggccaagaactgcattggggaaacgtacgcagcggcgactctgaaagtggagggagaa
gctcaagagatggaactgagggaagagaacaagcctcgtttcctcatcaagccgctctcc
acacgtgtcgccaggggcgaggacgcagtgttctcttgcaagctgtggggcaacccccgt
cccgaggtcgtctgggagaaggacggcaggaagctgaacgagatcttcgagagcacccac
ttcagcgtagggtaccaggaagggggatggtttcagcttaagatctttaaaacccgcgcg
cctgacggaggcgtatacacatgcaaggccaggaatgagtttggggagggtctggccgga
gctgtgctgctggtggacgctggtccagggcacgacgatgacggaaacagaaatggctac
acgaacggacactggaagggccatcaggggaaacaaaggagtgggaggcaggtcgcgtca
cgtctaaaggacgaccctctgccaaactcgaccaaagtaaaaatgtttgcagtgactgag
ggaaaacatgccaagtttcgttgttatgtgacagggaaacctaaacctgaaataatatgg
agaaaagacggcagacttatcttgtctggacgtcgctatctattatacgaagacagagag
ggctacttcactctgaaagtactctactgtaaacaacaagacaatggagtatatgtgtgt
gctgcatccaacactgcgggacaaactcttagcgctgtgcatctgtctgtgaaagagcca
cctgtgaggttcaagcagccgctctgtgatctgcaagtctgggagcgagacctggccatt
ctcgagtgtgaggtgccagaggactctgttcctatcacatggtacctggaggacaggagg
ttacagccaggagccaaatatgggatggaggagtgggggacaaagcgcaggctcacaatc
cgtgacatcggggtcgacgatgacggcatctatctctgtgaaatgccagacggtgggaga
agcatagctgaagtagctgtcaaaggtacaattgttagaaaacttcccagaaaagtggat
gttctggagggagaaaatgctgccttctgtgtggaggtggaggaagaagagatggacatc
cactggtataaggaaggagtagagctgagggagactcaccaaactatcctcaagtctttc
ggcagaactcatatcttggtatttgtcaataccacaccacaagattctggtctagtgata
ttttacgtgggcagatcaaagacttcatctcagctacgggtgaaagcggtgaggcactgc
ccccctacttgtccagtgggggtacagatcaacacagagcgtgcaaacgcagcactcctc
tcctgggttcccgcccccgactcgcggaagaacccaccctcggggtacgttttggagagg
caggaggtgggctcccaggagtggctacagtgtctaaccactgactcagccacttcagtg
gagatcctgggcgatagcgtgccatgcgaggcagactaccgattccgcatttgcagcgtc
aacaagtatgggaggagtggcaacgttgagttccctcgcgctgctcatctggttccagtg
gcaagaatacaagcaccacttcaggacgccctggttccagagggccaggacgcttgcttt
accattgagctgtctgcctctgtcattggcacgtggttcttgaatggcacccagctgcag
gacgatgatcgattctccatgcggcgcacacgtacgcatcagaccctgcggatacgtggg
gtacgagacacagataatggcgctgaaatcacattcattgcctatggaattagagattca
gctgcactctatatccaagctcccctcgtaaaattcacgccgctgtcagagatggacaga
aacaagtttgttgaagtaggaaacccaatagtgctctattgcgagttatcagaccctgaa
gccccagtccactggtacaagaatggtgtcgaattgcattcaggtgagggtctcgccatc
caatcagagggaaccatgaggagaattgtcatccagtcagcagagttctctcactcaggg
gtgtacagctgtgatgccatcgatgacgtcataagatttaatgtggaagtagaggcccca
cctgcaaggttctcactgcttcctgattctgagagaagcaagtccattgaagttggacgc
cccattgtgctccagtgtgagctttcagatcccactgcccaggtctactggtacaaagat
ggaacaaagctccaacagcaaagtggtctgagcatccagacagatgtcaataagagaaca
cttgttgtccagtcggctgagttttgccattctggaatatacaactgcaaggcaaaaggc
gacgctgtccagatcaatgtggatgtcaaagctcctccagtgaggttcacagctatccct
gaggctgagagaagaaaaagcattgaggcaggctgctccttcatgctgcagtgtgaggta
tccgaccccactgccaacgtcctttggcataaggatggaacgcagctcagtgtaaaatct
ggactagcattccaatctaagggcagcttaaggacattgcatatcgagtccaccgaactg
tctgactctggcatgtacagttgtgcaaccgaggatgatgccatcgaatttcatgtggag
atcagagctaagccagtgaggttcgctgctgtgtctgaagacgagaagagcaaatgtgtt
gaagcaggctgcccttttcaactgcaatgcgaactgtcagacccctctggtacagtctgt
tggtataaggatggcaaagagcttcttcccgagatgggactggatgctcaggcggatggc
accatgagaaggctggcagtactgtcggcagagatgtgccatgctggacagtacagctgt
aagacatcggatgactctgtccacttcactgtggagatcaaagctccaccagtgacgttt
tgtgccatacctgaagataagcagaggcggtgtattgaagcaggctgcccttttgaactc
gagtgcgagatatcaaatcctgcggctcacgtcacctggtacaaagatcgtagagaactg
gagccccaaggtgaaattgagactctgtctgagggggccaagagaaagctgtctgtgcca
gcagctgaggttcaccacacagggatatacacctgcaagacagcagacgatgccatcaga
tttaatgtggatgtcaaagttccatcaccaaggttcataccacttccagaagtagagaag
aacaagtctgtcacagtaggccagcgaatcgtgctcaaatgtgggatttcagaccataat
gccgaggtcagctggtataaggatggagaacagttgtctgggaaacatggagtgactatg
gagacagagggaaatgagcgaaaactcattgttgcatcagcaagtctttctgactccggg
caatacagctgtgctgttgctgatgatgctgtttcgttcaaggtggatgtccaagctgtt
cctgtgaggttctcagcacttccagatgttgcaaggaacaagtttgttgaagcaggctgt
cccattgtgctacagtgtgagatctcagaccccactgcccaagtttcctggtttaaggat
ggaaatcaagtcctcccaataggcggtcttgacatcctatcagagggcaccttcaggact
ctgatcatccaatcagcagagttgagtcactcgggagcgtacacctgtcactctgaggat
gatcgcatagcattcaaggtggatgttgcagcacctccagtgacatttgcctatgtccct
gaagaagatctccacaagaacattgtggaacaagaatgtctcaccttgtcatgcgaggtg
tcaagggttgacgccatgactcagtggtataaggatggagttgaggtgcagcctgatgac
aatacctcactgcagacagagggcacagagcgcaagcttacgatccaagcgtcacagcta
tcagactctggaacgtacacctgtcgtgcaggagacagcgtcttaatatttaaggtcaat
gtaagagagccaccagtcaaaattgtgttcccaaaagaagatgtccacttggatcgccat
gtcccagaggagatagtgctcagctgtgaactctccaggcccaatgcttctgtgacttgg
ttcaaagatggccagaagttgcaggacagtgagaatatcaaactgaagactgaagggcca
tacaggcgacttaagattctccgcagcggtgtagaggattctggggaatatgtctgtgat
acagctgatgacagaatattcttccagctgaatataacagagccacctgtgcgtattgta
tctccaagccagtcccaaatggaactttgtcagcagacagccgagcggatggtgctaagt
tgtgagatctccagggctaatgcagtagtccgctggtatcgggacgggctggaggtggag
gagaacgataatctgattctggaggtggatggagtctacaggaggcttatcatcccagag
acgaccgttaaagattcggctgaatatgtgtgcgatactggagatgattcagtcaccttc
tttgtaaacattgcagaacccccagtgaggtttatccgtccaagaaaaatggcttgtgga
gtggacgtctttgtgggtgacccgattctgcttgactgtgaggtatcaagagcaaatgct
gaggtgacctggaagaagaatggtgaggaaattgaagaaagcactaaggtcaccatcttt
gaagatggtctgattcgtcagttatccatcctgtctgccaccctggaggatgctggccaa
tacgtgtgcgatgcaaaggacgacgtcatggacttccacgtcagtgtcacagttccacct
attcaaatcctgagaaaagacgagatagtcacaaaaaggcacatagtcgcacctgatgac
attgtgttgaagtgtgagttgtctcgctctgacggaactgtcgactggtacaaggacaat
gagcgggttgtggacagcgagcgcctgtcatgtgagtccgagggagcgtttcgaaccctg
atcatcttgaacgcagagatcgccgatgctggagaatacatctgtgatgcaaaagaggac
aaagttaaattttctgttacagttgaagaggcaccagtgaccattctaggaaattcagag
caccctgaacatcatagcctggtagcaggagatgacctgatattggagtgtgaggtgtct
cggtctaatgcgccggttgaatggtactgcaatggaaggttattgaacccagactcgcga
acacacatagaaagtcgagagacagtgaggaagcttgtccttacgtgccttgaactctca
gatgcgggggaatacatgtgcgatgccgcggatgacaaaatgataatcttggtgagagtc
caagaaccaccgacaaaatttctcaataaagaggaagagaacaagcttgtcaccactgag
aatgacaaggtgacgctgtgcgccaaggtcaacaaggacagagccaaagtccgttggttg
aaagaccaggagcccatcataggtagccgtttcaaaacaagcactgaggggaaaaaccat
tacctagtcattgacccggtgaagaggtcagactgtggtagatttgtgtgtgatgtaagc
accgatgagatggacttcactgtggttgtcaaagaactgaaggtgaaattttccaagcct
ctggaaaacgcaatcggcctcaaggatagtgacctcgttttgcgatgtgagctctacaag
ccgagaggagatgtccagtggctcaaggacaatcaggagattacccccagccaccacttc
acaatcagagccaatggctgtgagaggagcctcaccatacacaatgtcacactggaggac
gctggagtttacagctgtgaatccagagatgagaggacatgtgcgactgttgaagtgcaa
aagcctcgcgttgttgagtttattgctgagctgcacaacattactgtcatggagggagag
gatgccacattcaaatgtgtcctgtcgcctgaggacgctaaactggagtggtgcatgaat
ggcaatcccatcgtcgcagacgagaagttcaccatgtctagcagtggcctgtcccacact
cttcacattcacaattgccaggtcggagacacctccaggataaccgctgaagccgaaggt
gtggtgtccaaggccagtcttcgagtgcaagaggcacaggtggtgtttaccaagaatatg
gaggatgtcatctctgaggagttcggggaggccacgttggaggtggaggtcagtctggaa
tctggtgaggtgcagtggatgagacatgggatagttatacaatcagggcccaagttcacc
ctgaaacagaccgacaggaagcgtagcctggtcatccacaagctcgtcctctctgaccgc
ggcacttacagctgtgaaacgctccacgaccgcacacaggcaaacctcagcgtggaaccg
agaaaaataaaaattcgcaaaggtctgaatgaagttcagacttttgagcgtgagacagcc
tcatttgaggtggagctgtcccacaacaacgtcgaggccgtgtggcagaaggatggaatc
cgcctgaagcccggcacccggtggcgcatgagcagcaaaggccgtgtgcacggtctcacc
atctccagcctcaccctggaggacacgggcacctactcgctctccgcggagaatgctaga
tcttcagcgagactaactgtgaaagaaactccagtgactcttctgaagaagcttgaagat
gtaagattcccagaggcctcagcggttaccatggagtgtgaactatcgagacataatgta
gaggttaagtggacaaaggatggtgtggaactgaagcctggcaagaatcatcgaatttat
gccatggggcggaagcgtttccttcagatcttacgctgtgagatagccgattcgggtgtt
tacatgtgcgacgttggagacaccagtactagctgctccttggaagtatatgaacctgag
ctggaggtcatccagggcctggaggatctggagatccaggaggacgagaacgccgtgttc
atgtgtgagctgtctctggacaacatcccaggagaatggttcaagaatggcgagaagatc
aaacccaccagcaccatcaggatccgacaggaaggaaccaaacacttcctcctgatctgc
aacatcaagggagaggactcgggggaaatcaaatttgttgccaaaaatattgagtctaca
gcttgcctggaagtagaggaactcccagtaaatatagttcaaccacttcaggacaaaact
gctctagaaaagagccgcgtccttctggactgctctgtgtccaatccacggtgcagtatc
cgctggtacaaaggcagcaatgtggtcctgccgtccgagcgctttgagatctgcagtgag
ggctgctaccggaagcttgtgatccagcaggtggcactagaggacgagggtacctacagt
gtccaggttggagattattcttgctccgccaaactgacagtagaagcccagtctctgctg
atggtgcgcgagctgcaggatgtagaggtggtggcccctgacgaggcctgctttgactgc
gaggtctccatgccggtgaccaaggcccctgtgtggacgctcaacggggagagcctgcag
cctggccctcgggtcctgctggagaagatgggcaccgtccataaactcacgctgaggcag
acgtcggtggacatgaccggttctgtccaattcacgtccggaaaagccaagagcactgcc
aacctcgtggttaaaagtgatctttga
DBGET
integrated database retrieval system
