| Entry |
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| Symbol |
col18a1a
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| Name |
(RefSeq) collagen type XVIII alpha 1 chain a isoform X1
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| KO |
| K06823 | collagen type XVIII alpha |
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| Organism |
spil Sardina pilchardus (sardine)
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| Brite |
Exosome [BR:spil04147]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134078312 (col18a1a)
Proteoglycans [BR:spil00535]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
134078312 (col18a1a)
Glycosaminoglycan binding proteins [BR:spil00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
134078312 (col18a1a)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
4:11013796..11089907
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| AA seq |
1354 aa
MSKLGMRLGLPLLACLLCAGHSEGWLWWDDGEQDKQTSATPANARPPQPPGSGPETQRRK
EESGLSLLQLIGNPPPSDIELAYSPDNTPGYVFGPSSNTGQLAHAHLPNPFYRDFSLMFH
LKPTTARGGVVFAVTDATQQIMYVGVKLSAVQGGRQRIVLYYTEPDSTSSYEAASFTVPS
MQDRWTRFALSVNQDTVLLFFNCDTDQQVVNFERSPDDMDMENGAGIFVGQAGGADPDKF
LGVIAELRVVGDPRAAELHCDEDGDDSDAASGDYGSGQGERSSTVSTTPPSLRPIQPPPV
TSPKGDTGHRHTAGGSAAGPHQKGEKGERGDSGPKGESGYSGGGGSGRAEKGAKGDRGLG
SPGPKGDRGPSGPPGPPGPPGAAVVSSRDGSSVQTVPGPRGPPGPGGSPGPAGTDGEPGD
PGEDGKAGPVGPRGFPGTPGDTGSKGTKGDRGDGQPGPRGPPGPPGPPGPGLGGRDRLTY
VDSEGSGFPDLESVRGQPGVPGLPGPPGPPGPPGYGGSSGSGASGSPGAPGLPGPTGPPG
TAGRPGPAGPKGDAGELGLPGAVGEKGNKGDAGTPGSPGQTGLAGLPGPMGPVGQPGLPG
PPGPGYRVGFDDMEGSGVGVYHGGTGVRGPDGVQGPPGIPGLPGKPGFPGLTGQKGNEGS
QGRDGRPGLDGFPGPQGPKGERGDRGDRGEPGRDGSGIPGPPGPPGLPGQIVYSSGGSYD
GVAAQGPQGNPGLQGQAGFPGPMGPKGDRGDSGQPGVATKGEKGEPGAIIGPDGNAIHYA
GSGGQKGDMGPPGPVGPAGPYGPEGPKGEIGFPGRPGRPGVNGYKGEKGDSSSGSGYGYP
GPPGPPGLPGPPGPTVSVDRFNRYDDSSRNYPAEKGEKGDRGDAGIPGSPATSYDTDYHS
ARQKGEQGDTGGKGEKGEPGGGYYDPRYGGGQGHQGPPGNPGLPGPKGDSIRGPPGPQGP
SGPPGVGYDGRPGVPGPPGPPGPPGALPGAHRPSISIPGPPGPPGQPGQSTAVIVQRTYD
VVGTARRYPEGTLIFDMEKINLYIRVRDGIRQVQLGDYLPFFTGLDNEVAAAQPPPVIHY
PDHGAGSVTRPIEPPPQQPADVPRREPEPEPQPDPRYPSHHDPRYPHNPDYRQPSQPHPR
YPQHPDPRQPTQPEIRQPVTPVRRPEPQPARPVDTTGPGLHLIALNSPQSGNMRGIRGAD
FLCFQQARAVGLTGTYRAFLSSKLQDLYSIVRKSDRDTLPIKNLKGQVLFSSWESLFSEA
EGRMKDNAPIYSFDGRDILRDSAWPEKMVWHGSSPRGQRQTDNYCETWRAGDRAVTGLAS
SLQSSQLLNQTPNSCSGSYIVLCIENSYISHSKK |
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| NT seq |
4065 nt +upstreamnt +downstreamnt
atgtctaaactcgggatgcgtctgggcctccccctgctcgcgtgcctgttgtgcgccggc
cactcggagggctggctctggtgggacgatggggagcaggacaaacagacgtcggcgacg
cctgccaacgcaaggcccccgcagccgcctggaagcgggccagagacccagcggagaaaa
gaggagagcggactgtccctgctgcagcttatcgggaacccccctccgtcggacatcgag
ctggcgtacagccccgacaacacgccgggctacgtgttcgggcccagctccaacacgggc
cagctggcgcacgcgcacctgcccaaccccttctaccgcgacttctcgctcatgttccac
ctgaagcccaccacggcgcgcggcggcgtggtcttcgccgtgaccgacgccacgcagcag
atcatgtacgtgggcgtgaagctgtcggcggtgcagggcggccgccagcggatcgtcctc
tactacacggagcccgactccaccagctcgtacgaggcggccagcttcaccgtgccgtcc
atgcaggaccgctggacgcgcttcgccctcagcgtcaaccaggacacggtgctgctcttc
ttcaactgcgacacggaccagcaggtggtcaacttcgagcgctcgcccgacgacatggac
atggagaacggcgccggcatcttcgtggggcaggccggcggggccgacccggataagttc
ctgggtgtgattgccgagctgagggtcgttggagatccccgggccgcagaattgcattgt
gatgaagatggagatgactcagatgcggcctcgggcgattacggaagtggacagggagag
aggagctccaccgtctcgactacacctccttccctgcggccgatccagccgcctcccgtg
acatcaccgaagggcgacactggccacagacacaccgctggtggctctgcagctggaccg
caccagaagggagagaagggggagcgaggagactcggggccgaagggagagagcggctac
agcggcggaggagggagcggccgtgcagagaagggtgccaaaggagaccggggcttggga
tcacctggtcctaaaggggaccgcggtccttccgggcctcctggacctcctggaccccca
ggagctgctgtggtcagctcacgcgacgggtcatcggtccaaaccgttccagggcccaga
ggaccacctgggccaggcggatcacctggccccgcaggaaccgacggtgaacctggtgac
cctggtgaagacggcaaagctgggcctgtgggacctcgtggattcccagggacaccggga
gacaccggctctaaaggaaccaagggtgaccgtggtgacggacagccaggcccccgtgga
ccacctggcccccctggtcctcccggccctggccttggaggccgagacagacttacctac
gtggactcggagggctctggattccctgatttggagagcgttcggggccaacctggagta
cctggactacctggccctcctgggcccccaggtcctcctggctatggggggtcgtctgga
tctggtgcatctgggtcacccggagcccctggtttaccgggccccacaggtcctcctggc
acagcaggacgaccaggaccagcaggccccaagggagatgcgggtgaattgggactacct
ggagcagtgggcgaaaagggcaacaagggtgacgcaggtacccctggttctccgggccag
actggactcgccgggctccccgggcctatgggacccgttggacaaccaggacttccaggt
cctcctggacccggctaccgcgttggctttgatgatatggagggctctggtgtgggcgtc
tatcatggcggaactggagtgagaggacctgacggagtacagggtccacctggtattcct
ggccttccgggcaagcctggcttccctggtctcactggccagaagggaaatgaggggtct
cagggcagagatggtcgaccaggactggacggttttcctggaccacagggaccaaaagga
gaaaggggggacaggggagatagaggggagcctggtagagacggctctggtattcctgga
ccacctggccctcctggacttccagggcagattgtctactcatctggtggaagttatgat
ggtgtggccgcacaaggacctcagggtaatcctggactgcagggtcaagcagggttccct
ggcccgatgggaccaaagggtgatcgaggtgactcaggccagccaggagtcgcaaccaag
ggtgaaaaaggagaacctggcgcaatcatcgggcctgatggcaatgccattcactatgct
ggctcgggcggacagaagggagacatgggacctcctggacccgttgggccagctggacca
tatggtccagaggggccaaagggtgaaatcggtttccctggcagaccaggccgtcctggt
gtcaatggctataaaggagaaaaaggtgattcaagctcaggatctggatatggctatcct
ggtccccctggccctcctggcctccccggcccccctggtcccacggtgtctgtggacagg
tttaatagatatgatgattcatcaaggaactacccagcggagaaaggagagaaaggagac
cgtggtgatgccggcattcctggaagtccagccacttcctatgacactgactatcattca
gcgaggcagaaaggagagcaaggagacacaggtggcaagggagagaagggagagccaggc
ggaggctactacgatccccgctacggaggtggccaagggcaccagggacccccaggaaac
ccaggacttccaggtccaaagggagattccatccgaggacccccaggaccacaggggcca
tcagggcccccaggagtcggctatgatggtcgcccaggtgtgcctggcccccctggacca
cccggacccccaggagctctccctggagctcatcgaccctccatcagcatacctggacct
cctggtcctcctgggcaacctggacaatcaactgctgtgatcgttcagaggacatacgat
gtggtcggtactgcaaggagatacccagagggcaccctaatcttcgacatggaaaagatc
aatctctatatcagagtccgagacggcatccgtcaagttcagctcggagattatctgcca
ttcttcactggtctggacaatgaggtagcggctgcccagcctcctccagtgatccactac
ccagaccacggagcgggcagtgtcactcgacccatcgagccaccaccccagcagcccgcc
gatgtgcccaggcgggagccagaaccagagccgcaacctgacccccgctacccatctcac
cacgatcccagatacccccacaaccctgactacagacaaccctcacagccacacccgaga
taccctcagcatccagaccccaggcaacccactcagcccgagattaggcagcctgtgacc
cctgtacgcaggcctgagccccagcctgccagacctgtggacactacaggccctgggctg
catctgatcgccctgaactcgccccagtcgggcaacatgcggggaatccgtggggccgac
ttcctgtgcttccagcaggcccgtgccgtgggcctgacaggcacctacagggccttcctg
tcctccaaactgcaggacctctacagcatcgtgcgcaagtccgatagggataccctgccc
atcaagaaccttaagggccaagtgctgttcagcagctgggagtctctcttctcggaggcc
gagggcaggatgaaggacaacgctcccatctactcctttgatggccgagacatcctcagg
gacagtgcatggccagagaagatggtctggcatggttccagcccacggggccagcgtcag
acggacaactactgcgagacatggcgggcgggtgaccgggcagtgacaggcctggcctcc
tcactgcagtccagccagctactcaatcagacaccaaacagctgctctggctcctacata
gtgctgtgcatcgagaacagctacatctcacactccaaaaagtaa |
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