Sardina pilchardus (sardine): 134078371
Help
Entry
134078371 CDS
T10667
Symbol
ddx3xa
Name
(RefSeq) DEAD-box helicase 3 X-linked a isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04622
RIG-I-like receptor signaling pathway
Brite
Enzymes [BR:
spil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134078371 (ddx3xa)
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
134078371 (ddx3xa)
mRNA cycle factors
Common to processing body (P body) and stress granule
134078371 (ddx3xa)
Spliceosome [BR:
spil03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
134078371 (ddx3xa)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
134078371 (ddx3xa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134078371
NCBI-ProteinID:
XP_062390243
LinkDB
All DBs
Position
4:14500550..14519308
Genome browser
AA seq
800 aa
AA seq
DB search
MSHVVVDNSHGLEQQLAVLDLNSADVQGGGTGSKWRYIPPHLRNKEASKNAGNAFPSGRQ
SGYSVPPVRSCYPRYQTQEISYYHSYSGGWSERCVSQAYTDSSVMMDGNDDTSSVFSWAD
RCDSPGWDGGRSNGFVNGYHDNRMNGGGNNFGRGPPRNDGRGGGRGGFRGNRGGTFTQPM
HNAVPYGYENKDGGWNAGVNRDAYSSFGARADRGKSAFFNDRGTGSRGRYERGGFTAGGN
SRWVEESRDEEDWSKPTPPNERLEHELFAASNTGINFEKYDDIPVEATGSSSPPHIESFH
DVDMGEIIMGNIALSRYTRPTPVQKYAIPIIKAKRDLMACAQTGSGKTAAFLLPILSQIY
MEGPGEALQAAKNSGQENGKYGRRKQFPISLVLAPTRELALQIYDESRKFAYRSRVRPCV
VYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCNYLVLDEADRMLDMGFEP
QIRRIVEQDTMPPKGVRHTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSENITQKV
VWVEESDKRSFLLDLLNATVIPSEVQENAGEAPERPGKDSLTLVFVETKKGADALEDFLY
REGYACTSIHGDRSQRDREEALHQFRSGRCPIMVATAVAARGLDISNVKHVINFDLPSDI
EEYVHRIGRTGRVGNLGLATSFYNDKNSNITKDLLDILVESKQEVPSWLESLAYEHQHKS
SNRGRSKRFSGGFGARDYRQMSGGGNTFGNRGARSAGGHGGNRGFGGNKGGFGSFGNDGY
GGSYGGSYGGNYNQVDWWGN
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggtcgtcgacaattcacacggtctagagcagcagcttgctgtcctagac
ttgaactctgcagacgtacagggtggtggcactggcagtaagtggcgttacattccgcct
cacttgagaaacaaagaggcttctaaaaatgcaggaaatgcttttccctctggtagacag
agcggttattcagtgccaccagtaaggagctgttacccaagataccaaacccaggagatt
tcctattaccacagctacagtggtggctggtccgagagatgtgtctcccaggcctatact
gacagcagtgtgatgatggacggaaatgacgacacttcaagtgtcttcagctgggctgac
cgctgtgattccccaggatgggacggtgggcgcagcaacggctttgtgaatggctaccat
gacaaccggatgaatggcggcggcaacaactttgggcgtggcccacctcgtaacgacgga
aggggaggcggacgtggcggtttccgtggaaaccgtggcggcaccttcacgcagcccatg
cacaatgcagtaccttatggatatgaaaacaaagatggcggctggaacgctggggtcaac
agggatgcctacagtagctttggggcacgggccgaccgtggcaaatccgctttctttaac
gacagaggcaccgggtccagaggaaggtacgagcgcgggggcttcactgccggagggaac
agccgctgggtggaggaatccagagatgaagaggactggtccaaacccacccctcccaac
gagcgcctggaacatgagctgttcgctgccagcaacacggggattaactttgagaagtat
gacgacattcctgtggaagccactggctccagttcccctcctcacatcgagagcttccat
gatgtggacatgggggagatcatcatgggcaacatcgctctgagccgctacacgcggccc
accccagtacagaagtatgctatccccatcatcaaggccaagagagacctgatggcctgc
gctcagacaggctctgggaagactgcagccttcctgctgcccatcctcagccagatctac
atggagggccctggagaggccctgcaggctgccaagaacagtggacaggagaacgggaaa
tatggccgccgcaagcaattccctatttctctggtgctggctccaacccgtgagctggcc
cttcagatctacgacgagtcccgcaagtttgcctaccgctcccgcgtgcgcccgtgcgtg
gtgtacggcggggccgacatcggccagcagatccgtgacctggagcgaggctgccacctg
ctggtggccacgcccgggcgcctggtggacatgatggagaggggcaagatcggtctcgac
tactgcaattacctggtgctggacgaggctgaccgcatgctggacatgggctttgagccc
cagatccgccgcatcgtggagcaggacaccatgccccccaaaggggtccgccacaccatg
atgttcagcgccaccttccccaaggagatccagatccttgcccgggacttcctggaggag
tacatcttcctggctgtgggccgagtaggctccacctctgagaacatcacccaaaaggtg
gtgtgggtcgaggagagcgacaagcgctccttcctgctggacctgctcaatgccacagtc
attcccagtgaggttcaggaaaatgcaggcgaggctccggagagacccggtaaagactca
ctcacactggtgtttgtggagaccaagaagggcgccgatgccctagaggacttcctgtac
cgcgagggctatgcctgcaccagtatccacggcgaccgttcccagagagaccgtgaagaa
gctctgcaccagttccgctctggtcgctgccccatcatggttgccactgcggtggctgcc
cgtgggctggatatctctaatgtgaagcatgtcatcaactttgacctgcccagtgatatt
gaggagtacgtccaccgcattgggcgtaccggccgtgtaggaaacctcggtctggctact
tccttctacaatgacaagaacagcaacatcacaaaggacctgctggacatcctggtggag
tccaagcaggaagtgccctcctggctggagagcttggcctacgagcaccagcacaagagc
agcaaccgtggacgctccaagaggttctctggtggatttggagccagagactaccgtcag
atgtctggcggtggaaacacctttggcaatcgcggcgctcgtagtgcgggtggccatgga
ggaaaccgtggcttcggtggaaataaaggtggctttgggagctttggaaatgatggctac
ggcgggagctatgggggcagttatgggggcaactacaaccaggtggactggtggggcaat
tag
DBGET
integrated database retrieval system
