Sardina pilchardus (sardine): 134078397
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Entry
134078397 CDS
T10667
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134078397 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spil03019
]
134078397 (hspd1)
03110 Chaperones and folding catalysts [BR:
spil03110
]
134078397 (hspd1)
03029 Mitochondrial biogenesis [BR:
spil03029
]
134078397 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spil04147
]
134078397 (hspd1)
Enzymes [BR:
spil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
134078397 (hspd1)
Messenger RNA biogenesis [BR:
spil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
134078397 (hspd1)
Chaperones and folding catalysts [BR:
spil03110
]
Heat shock proteins
HSP60 / Chaperonin
134078397 (hspd1)
Mitochondrial biogenesis [BR:
spil03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
134078397 (hspd1)
Exosome [BR:
spil04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134078397 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
134078397 (hspd1)
Exosomal proteins of breast cancer cells
134078397 (hspd1)
Exosomal proteins of colorectal cancer cells
134078397 (hspd1)
Exosomal proteins of bladder cancer cells
134078397 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
134078397
NCBI-ProteinID:
XP_062390303
LinkDB
All DBs
Position
4:15580431..15587982
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AA seq
575 aa
AA seq
DB search
MFRLPTVMRQVRPVCRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLTDKFMNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDTISKGANPVEIRRGVMQAVETVIDELKKLSKPVTTPEEIAQVATISANGDS
EIGTLISDAMKRVGRNGVLTVKDGKTLHDELEIIEGLKFDRGYISPYFINTAKGQKCEFQ
DALVLLSEKKISSIQAVVPALEMANQQRKPLVIMAEDVDGEALTTLVLNRLKVGLQIVAV
KAPGFGDNRKNQLLDIAIATGGTVFGDEATGLALEDIQPHHFGKVGEVVVTKDDTMMLKG
KGDPALIEKRANEIAEQIEDTTSDYEKEKLNERLAKLSDGVAVLKIGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLQCIPALDTIKPVNADQKIGIDIIRRALRVPAMTIA
KNAGVEGALVVEKILQSDVGIGYDALVGEYVNMVEKGIIDPTKVVRTALLDAAGVASLLS
TAEAVVTEMPKEEKAPAMGGMGGMGGMGGMGGGMF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgttccgccttcccactgtgatgagacaggtgcggcctgtgtgcagagccctggcccca
cacctcacccgagcttatgccaaggacgtgaagttcggcgccgatgcccgtgccctcatg
ctgcaaggcgtggacctactggctgatgccgtggccgtcaccatgggacccaagggccgc
acagtaatcatcgagcagagttggggaagccccaaggttaccaaggatggcgtcacggtg
gccaagagcatcgatctgacggacaaattcatgaacatcggagccaagctcgtgcaggac
gtagccaacaacacaaacgaggaggctggagatggaaccaccacagccaccgtcttggct
cgcgccatcgccaaggagggctttgacaccatcagcaaaggcgccaacccggtagagatc
cgacgcggtgtaatgcaggctgtagagacggtcatcgacgagctgaagaagctgtccaag
ccagtcactacaccagaggagattgcgcaggtggcaactatttctgccaatggagacagc
gagattggtactctcatctcagatgcaatgaagagagtgggccgaaatggtgttctcact
gtaaaggatggcaaaaccctgcatgacgagttggagatcattgaaggccttaagtttgat
cgtggctacatctctccctatttcatcaacaccgcgaagggtcagaagtgcgagttccag
gatgctttggttctcctgagtgagaagaagatctccagcattcaggccgtagtccctgct
ttggagatggccaaccagcaacgcaagcctcttgtcatcatggctgaggatgtggatggg
gaggcactgaccacactggtcctcaacaggctaaaagtgggactgcaaatagttgctgtg
aaggctcctggctttggggacaatcggaagaaccagctgctggatattgccattgccacc
gggggcactgtttttggtgacgaggctacaggcctggcccttgaggatattcagccacac
cactttggaaaggtgggcgaagtagtggtcaccaaagatgacacgatgatgcttaaaggc
aaaggggacccggcgttaatcgagaagcgtgccaacgagatcgctgagcagattgaggac
accaccagcgactatgagaaggagaagctgaacgagcgactggccaagctgtccgacgga
gtggctgtcctcaagattggcggtacaagcgatgttgaggtaaatgaaaagaaggatcga
gtaacagatgccctgaatgccacccgggcagctgtagaggaaggcattgtgccaggtggt
ggctgtgccctactgcagtgtatccctgctctggataccatcaagcctgttaatgctgac
cagaagattggtattgatattattcgtcgagctctgcgcgttccagccatgactattgct
aagaatgctggggtggagggcgctctggtggtggagaagattcttcagagtgatgtcggc
attggctatgatgccctagtcggggaatatgtcaacatggtggagaagggcatcattgac
cccacgaaggttgtgaggacggccctgttggacgcagccggtgtggcgtccttgctgtcg
acggccgaagccgtagtcacggagatgcccaaggaagaaaaggctccagccatgggtggc
atgggcggcatgggtggcatgggcgggatgggaggtggcatgttctaa
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