Sardina pilchardus (sardine): 134078537
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Entry
134078537 CDS
T10667
Symbol
stat1b
Name
(RefSeq) signal transducer and activator of transcription 1b
KO
K11220
signal transducer and activator of transcription 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04217
Necroptosis
spil04620
Toll-like receptor signaling pathway
spil04621
NOD-like receptor signaling pathway
spil04625
C-type lectin receptor signaling pathway
spil05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
134078537 (stat1b)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
134078537 (stat1b)
04621 NOD-like receptor signaling pathway
134078537 (stat1b)
04625 C-type lectin receptor signaling pathway
134078537 (stat1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134078537 (stat1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134078537 (stat1b)
Transcription factors [BR:
spil03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
STAT
134078537 (stat1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
STAT_alpha
STAT_int
STAT_bind
STAT_linker
SH2
THP2
STAT1_TAZ2bind
SecM
Motif
Other DBs
NCBI-GeneID:
134078537
NCBI-ProteinID:
XP_062390524
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Position
4:complement(20708152..20731779)
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AA seq
752 aa
AA seq
DB search
MSQWSMLQQLDSRYLEQVDQLYDDTFPMEIRQYLSQWIESHDWESVATSDSLATVRFHDL
LAQLDDQYSRFALENNFLLQHNIRKIKRNLQEHYQEYPMTMAMLICNALQEEKKILNIAI
KTEEGAASAQSNNSMGSKHRELDNKVSRLRKMVQDTEIDIKSLEDLQDEHDFKKKTIQNR
DQEPNGVKTLDNKREEMQIKEMFIKLKVKREHVVQQVAESLTVTEHIQFSLITEELPDWK
RRQQVACIGGPPNTCLDQLQSWLTSVAESLKQVRQQLRKLQELVQKYTYEQDPIALGVNA
LEERAMLLLKNLIVSSLVVERQPCMPTHPQRPLVIKTQVQFTVKLRLLVKLPELNCQLKV
KVQFDKDVVERNTVRGFRKFNILGTNTKVMNMEESNGSLAAEFRHLQLRELRATGNRTNE
GPLIVAEELHTICFETQLNLPGQSPIDLATTSLPVVVISNVAQMPSAWASVLWYNMLTSE
PKNLSFFLSPPVASWGQLSEVLCWQFSSITKRGLNNDQLSMLGDKLLGRDAGGSPEGQVP
WTKFCKSSDRGFSFWLWMDSILDLIKRHLLSLWNDGFIMGFVSKEREKVLLRDKSPGTFL
LRFSESSKEGAITFTWVEHTISDGPKVHAVEPYTKKELAAISFPDILRNYKVMAENNLPI
NPLLYLYPNTPKDNAFGRYYSRPTEEERSEPMDVEDASHSSGYIPTELISVTVKEPRLQE
SIGLPLSPDDYNGYSDIVPEDIDSLINDAFTH
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtggagtatgcttcagcagctggactccaggtacctggagcaggtggaccag
ctttatgatgataccttcccaatggagatccgacagtacctgagccagtggatcgagagc
catgactgggagtcggtggccaccagtgactcgttggcaacagtgcgctttcacgacctc
ctcgcccagctggacgaccagtacagccgcttcgccctggagaacaattttctgttgcag
cacaacatccgcaagatcaaacgcaacctgcaggaacactaccaggagtatccgatgacc
atggcaatgcttatctgcaatgcactacaagaagaaaagaaaatcctcaacatcgccatt
aaaacagaggagggggcagcctcggcacaaagcaacaatagcatggggagtaagcacaga
gaactggacaacaaggtcagcaggctgaggaagatggtgcaggatacagaaattgacatc
aagtccttagaggaccttcaagatgagcatgatttcaagaagaaaacaatccaaaaccga
gaccaggagccgaacggagtgaagactctggacaacaagcgtgaggagatgcagatcaag
gagatgttcatcaagctcaaagtgaagagagagcacgtggtccagcaggtggctgagtcc
ctgacggtgacggagcacatccagttcagcctgatcaccgaggagctgcccgactggaag
aggcgccagcaggtagcctgtatcggcggcccccccaacacctgcctcgaccagctgcag
tcatggttgacgtcggtggcggagagcctgaagcaggtgcgtcagcagctgaggaagctg
caggagctggtgcagaagtacacgtacgagcaggaccccatcgccctgggcgtcaacgcg
ctcgaggagcgtgccatgctgctgctcaagaaccttatagtcagctccctggtggtagag
aggcagccctgtatgcccacgcacccacagaggcccctggtcatcaagacacaggtgcag
ttcaccgtcaagctcagattgctggtaaagctccccgagttgaactgccagttgaaagtc
aaagtccagtttgacaaggatgttgtggagcgcaacactgtgagagggtttcggaaattc
aacatcttggggacaaacactaaggtcatgaacatggaagagtccaacgggagcctggct
gccgagttccgtcacctgcaactgagggagttgagggcgactgggaaccgcacaaatgag
ggcccgctcattgtcgcagaggagctgcataccatttgcttcgagacacagctcaacctg
cccggacaaagccccattgatctagcgaccacgtctctccccgtcgtggtcatctcgaac
gtggcccagatgccaagtgcctgggcctcagtgctgtggtacaacatgttgaccagcgag
cccaagaacctgtcctttttcctcagcccccccgtggcctcctggggacagctctccgag
gtgctgtgctggcagttctcctccatcaccaagcgcggcctcaacaacgaccagctaagc
atgctgggagataagcttctcggtcgggatgctggtgggagtccagagggccaggtaccg
tggaccaagttctgcaagtcaagtgacagggggttctctttctggttgtggatggactcc
attttggacctgataaagcgccacttgctcagcctgtggaatgatgggttcatcatgggc
tttgtgagtaaggagcgtgagaaggtgctgctgagggataagagtccaggcaccttcctg
ctgcgcttcagcgagagcagcaaagagggagccatcaccttcacctgggtggagcacact
atcagcgacgggccaaaggtccatgcggtggaaccctacacaaagaaagagctggcagcc
atttcctttccagatatcctgcgcaattacaaagtcatggctgaaaacaacctgccaatc
aaccctctactttacctctatcccaacacccccaaagacaatgcgttcggacgctactac
agccggcctacagaggaggaacgctcagaaccaatggacgttgaggatgccagccattca
agcggttatatacccactgaactcatctcagtgactgtgaaagaacctagattgcaggag
tccatcggtttacctttgagcccagatgactacaacggttactccgatatagtcccagaa
gacatagactcactgataaatgatgcatttacccactag
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