Sardina pilchardus (sardine): 134078789
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Entry
134078789 CDS
T10667
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
134078789 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spil03400
]
134078789 (xrcc5)
DNA repair and recombination proteins [BR:
spil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
134078789 (xrcc5)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
134078789
NCBI-ProteinID:
XP_062390923
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Position
4:29344087..29365374
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AA seq
729 aa
AA seq
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MARTSKSALVLCMDVGFSMSNAAPGHEPSFEQAKKIIQKFVQRQVFAETKDELGLVLFGT
DHTKNPLATDSQYQNIAVHRHLMIPDFELLEEIEKDIHPGSQQADWLDALVVCMDLLQKE
TLGKKCDRLNIALLTDLSSQVSSDQLDIIIENLKRAGVTVQFFLPFPADAADDPGEGGSG
GDGHGAARRPPHGKGLSREQQQGLEMVQQIMNSLDEENGLDEVYAFSDAIEKLSIFKRLE
RRPMAWPCTLTIGGSLAIRIVGYKAVTEEKVKKTWSVVDAQSSRRDDVKRETVYCLHDDN
ETEVQKDDTIQGFRYGSDIVPFSKVDQEQMKYKSDGKSFSVLGFAKQSMINRHHFMGSQA
IKVFAPKDDEHAAMALSALIRALDGLGMVAIVRYAYDRRSNPQVGAAFPCVKEKYECLIY
VQQPYMEDLRQFSFASLENNKKFAPTEDQLSAVDSFIDSMMLVEENEDGEVEDLFKVNHI
PNPQFQRLFQCLHQRGVNPSAPLPPMEPWLKRMLERPQVLEARCRAPLQEVKRRFPLKEV
VRKKEQKTSADVFGNGKEEPDAKKAKVDEDDEYNLAHISEGNITSVGSVDPVKDFRALIR
QKTLSFGEVCQQLILRIEQLLGNKGTPYYMKAITCILAFREQSVKATNAELFNSYMQSLK
RSIPDRGLQEFWDLVCSDRLTVISKDEVEGSTVSKQEAEQFLLMEEKKEEEEAPPADDMG
DVDDLLDMM
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgaacaagcaagtcagcgcttgtgctctgcatggatgtcggtttctccatgagc
aatgcagcccctggacatgaaccatcattcgagcaagccaagaaaatcattcagaaattt
gtccaacgacaggtatttgcagaaaccaaggatgagcttggcttggtactttttgggact
gatcacactaaaaatcccctggccacggatagccaatatcagaacatcgcagttcatcgc
cacctcatgatcccagactttgagctgctggaggaaatcgaaaaggacattcatccgggt
tctcaacaggcagactggctggacgcccttgtggtgtgtatggacctcctgcagaaggag
actctggggaagaagtgcgaccggttgaatattgctctgctgactgacctaagctctcag
gtcagctccgatcaactggacatcattattgagaacctgaagcgggccggtgtcacagtg
cagtttttcctgcctttccctgcagacgccgcggacgaccctggagagggggggtcaggt
ggggacggacacggggccgcccggagacccccccacgggaaggggctgtcgcgggagcag
cagcagggactggagatggtgcagcagatcatgaactcgctggacgaggagaacggcttg
gacgaggtgtacgccttcagtgatgccattgagaagctgtccatcttcaagcgccttgag
aggaggccaatggcctggccctgcacgctcaccatcggcggctccctggccatccgcatc
gtcggctacaaagcagtcacggaggagaaggtcaaaaagacttggtccgtggtggacgcc
caatccagccggcgagacgacgtgaagagggagaccgtctactgtctccatgacgacaac
gaaacagaggtgcagaaggacgacaccatacaggggttccgatatggcagcgacattgtt
cccttctccaaggtggatcaggaacagatgaagtacaagtcagatggaaagagcttttct
gttctgggcttcgccaaacagagtatgattaatcgccatcatttcatgggcagtcaggcc
atcaaagtgttcgcccccaaggatgatgagcacgccgccatggccctctccgccctcatc
cgcgcgctggacggcctgggcatggtcgccatcgtcaggtacgcctacgatcgccgtagc
aacccccaggtgggcgctgccttcccctgcgtcaaggaaaaatatgagtgtctcatctac
gtccagcagccctacatggaggatctgaggcaattctccttcgcctcgctggagaacaac
aagaagtttgcacccacggaggaccagctctctgccgtggactccttcatcgactccatg
atgctggtggaggagaatgaggacggggaggtggaggacctgttcaaagtcaaccacatt
cccaacccacagttccagagactcttccagtgtttgcaccagcggggggtgaaccccagt
gccccgctgccccccatggagccgtggctgaagaggatgctggagcggccccaggtcctg
gaggcacgctgccgtgctcctctgcaggaggtcaagaggaggttcccgctgaaggaggtg
gtgcgcaagaaggagcagaagaccagcgcagacgtgttcgggaacgggaaggaagaacca
gatgctaagaaggccaaagtggacgaggacgacgagtacaatctggcgcacatctcggaa
ggaaacatcacatctgtgggaagtgtggatcctgttaaagatttccgtgcacttattcgc
cagaagaccctctccttcggggaagtctgccaacagctgatcctcagaatagagcagttg
ctgggcaacaagggcacaccctactacatgaaagccatcacctgcatcctggccttccga
gagcagtctgtcaaggccacgaacgctgagctcttcaacagctacatgcagtccctgaag
agaagtattccagaccgaggcctccaggaattctgggatttggtctgctcagatcggctg
acggtgatcagcaaagacgaagtggaggggagcacagtgagcaagcaggaggctgagcag
ttcctactgatggaggagaagaaggaggaagaggaggcccctccagcagacgacatggga
gacgtggacgatctgctggacatgatgtga
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