Sardina pilchardus (sardine): 134078981
Help
Entry
134078981 CDS
T10667
Name
(RefSeq) alsin-like
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spil03036
]
134078981
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
134078981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
MORN
VPS9
SOS1_NGEF_PH
RhoGEF
RPN6_C_helix
Motif
Other DBs
NCBI-GeneID:
134078981
NCBI-ProteinID:
XP_062391128
LinkDB
All DBs
Position
4:31271810..31310425
Genome browser
AA seq
1765 aa
AA seq
DB search
MIRQHDDGTLMDTSKSSGEADADDGSSRERGVLHRWRGYSCSVSPERVLLSRPVLQAALG
SCHGLLLTEGGFVYSFGELPWKQGAGSHSPEPLQEACLNGRGVVSVASGSFHCGAVTRDG
CVLMWGDNSHGQCGLAGRSQVPSPTPITLLDTEGAVPRLVRAKSVACGAQHTLALSVGHE
VWAWGSGCQLGLVSQGNAPVCRPQKVEDLAGRYVVQVACGGFHSLALVRSLPPSSARTLS
LDKCGRCQQLLYTMIDRDDHVIISDNHYCPLGVELNEDMGQDGTPEKQQQQQQQAEEEPL
GQSSEGQGSNVVTLDVNHIGLSLSSEAFCPRVGSAGDSPEAGSKAENLVEPDEGSTPAQT
DTAKSPVRRTRSSQFPDEQELKNYLKRMSDLSLTEQTGTATHSAPSSPVSDQPSTTPTSA
PGLTPAPTHPPPPASHGNQLHHGGNQPGVTQPVVPLHTPACLPSCPHTHLNPAFDEHLAS
TCDDTFDEDSGLERDLEPGGRGGGAEGEGEGGGGVQGLCEGGARDPLSGLLRVQEREGER
GGHQAARSASMMDVRLEDASSSSSSRKTGRRNSLPGLTCQGSPLLPKLGHRRVGSAGGKK
MPVPVETEPLLPSLYTEVWSWGRGQEGQLGHGDRLPRLQPLCIKTLSKREVVKVEAGAHH
SLALTAQCQVFSWGSNKAGQLGHLNSLSTAPQPVKMSEGIHVWDVGAGQTHTLLLADGDC
VQPILYYSGEQVAEDGPTGTYTQTPALLPFCMNMGYVSKVFAGGQTCLALSDQNIMGFIS
TLHELCAAERKFYCRLSAVRSQILRPLLARESVQASLGQSFMLLQTLAGSFSRLCHLIGQ
HSVSLTRFLQRERDVRSLAVLKQTGIFLDTYKEYSSSVGNFMVMGGFLSLLKPLLECFGK
KLEVLQQLSEPKDKGSPTGSSPGSSSGPGLLQSLLYLPVKHMHQYSRLLLKLATCFHVES
EEYSLLDERCSRFEAAALQLLKQRKEAEKTLDFWRSLPTKASDALRTPCRRLVCESNYKA
LTLQNAGRFSVNRFILFNDALVHTQGNIPSKKFFSSYHVYPLATLWIEPLCEEDDGLFGL
KFTTPEDSFTALASSPAEKASWLRSINQAVEKLLEAEMDAKVTGSSLGLGSSGGHRTESR
MSRTATHTFAKEGRYKDATYEGRWLCGKPHGRGTIRWPDGRVYIGMFKHGQEDGFGDFVI
PIKNSHKTDHYQGHCKEGKMHGFGTYWYASGEVYEGSFWEHQRHGHGMLSSGKMASSSSS
VFVGHWVHDRKAGYGVFDDITRGEKYMGLWVDDQKQGHGVVVTQFGLYYEGQFSSNKMMG
LGLLLADDDTAYEGDFSEDWTLNGKGVLSLPNGDKMEGVFVGQWSSGLKIAGTYQKPNPY
GPERDRERTRPCKLGGMAVPADQKWAAVFEECWRRLGCDSPGRGDTSRAWDSIAISLTQR
QHRDSPELLTRSQHMTLECLEVIPQLNGQFTAETYNNVRRYLIKACDTPLHPLGWLLETL
VTVYRMTYVGVGSNRRLLQQAVLEIQSYISRIYQLVRFLFPSLPEDGTFIQEVSVVETLC
SSTDSGLHSEIPEQGFVVSCCSLLLPVLLPRLYPPLFTLYSLEHEREDELYWDCVSRLNK
QPDRALMGFLGVHQKFWPVAAISVLGDPEEVLTSTKDACYATAVETLQQISTTFTPANKL
LVIRHTFEEMTQEAQTLLDEDFRWSMDDLFPLFLYVVLRARIRNLGSEVSLIEDLMDPHL
QHGEDGLMFTTLKACYFQIQREKTA
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atgatcagacagcatgatgatggcacactaatggacacaagtaaaagctctggagaggct
gatgctgatgatgggagctccagagagcgcggtgtgctccaccggtggaggggctactcc
tgcagtgtcagcccagagagagtgctcctctccaggcctgtgctccaggctgccctgggc
tcctgccatggcctactgctgactgaaggtgggtttgtgtacagctttggcgagttgcca
tggaaacagggcgcggggtcccactcgccggagcccctgcaggaggcgtgtctgaacggg
cgcggcgtggtctcggtggcgtccggaagcttccactgcggggcggtgacgcgcgacggc
tgcgtgctgatgtggggcgacaacagccacgggcagtgcggcctggcggggcggagccag
gtgcccagccccacgcccatcacgctgctggacacggagggcgccgtgccgcggctggtg
cgggccaagagcgtggcgtgcggcgcccagcacacgctggcgctctccgtcgggcacgag
gtgtgggcgtggggcagcgggtgccagctcggactggtctcccagggcaacgcgcccgtc
tgccgaccgcagaaggtagaagacctggctggcaggtatgtggtgcaggtggcttgtggg
gggttccacagcctggccctggtgcgctcgctgcccccgtcctcagcccgcacgctttcc
ctggacaagtgcggccgctgccagcagctcctctacaccatgatcgaccgcgacgaccac
gtcatcatctccgacaaccactactgccccctaggggtggagctcaacgaggacatgggg
caggacggtaccccagagaaacagcagcagcagcagcagcaggctgaggaggagccgcta
ggtcaaagttcagaaggtcaggggtcaaacgtggtcactctagatgtgaatcacatagga
ttgtcactgtcgtcggaggcgttctgtcccagggtgggctctgctggagattctccagag
gcaggttctaaagcggagaacctggtagaacctgatgaggggagcacaccagcacaaaca
gacactgccaaatcgcctgtgaggagaaccaggagttctcagttccccgacgagcaggag
ctaaagaactacctcaagcgcatgtcggatctgtccctgacggagcagactggcactgcc
acccactccgctccctcctcgccagtcagcgaccagcccagcaccacccctacgtcagcg
ccaggcctcacgccagcccccacccaccctcctccgcctgccagtcatggcaaccagctc
catcatggtgggaaccaaccaggtgtgacccaacctgttgtccctctccatacacctgcc
tgcctgccctcctgtccgcacactcacctgaaccccgccttcgacgagcacctggcgtcc
acctgcgacgacacctttgacgaggactctggcctggagcgggacctggagcccggcggg
cgggggggcggagcagagggggagggggagggaggggggggcgtgcaggggctgtgtgag
gggggggcgcgggaccccctgagtgggctgctgagggtgcaggagcgggagggggagagg
gggggtcaccaggccgccaggagcgccagcatgatggacgtgcggctggaggacgccagc
agcagcagcagcagcaggaagaccggacgcaggaactcactacctgggctcacctgtcag
ggctccccactgttgccaaagctgggtcatcggagagttggctctgcaggaggcaagaag
atgcccgttcccgtggaaacggaacctctgctgccctctctgtacacagaggtgtggagt
tgggggcgtggccaggagggccaactgggccatggggaccgcctacccaggctgcagccg
ctctgtattaagacgctgagtaaaagggaagtggtgaaggtggaggctggggctcaccac
tctctagccctcacggcacagtgtcaggtgttctcctggggcagcaataaagcagggcag
ctgggacacctgaactctctgagcacggctcctcaacccgttaagatgtcagaggggatc
cacgtgtgggatgtgggtgccggtcagacccacacgctgctgctggccgacggggactgt
gtccagcccatcctctactacagcggggagcaggtggccgaggacgggcctaccggcaca
tacacacagacgcccgctctactgccattctgcatgaacatgggttatgtgagcaaggtt
tttgccggcggtcagacctgcctcgctctgtcggaccagaacatcatgggtttcatctcc
actctgcacgagctctgcgctgcggagaggaagttctactgccgcctcagcgccgtcagg
agccagatactacgccccctactggcacgggagagtgtgcaggcgtctctgggccagtcc
ttcatgctcctgcagaccctggcaggaagtttcagtcggctttgtcacctgattggtcag
cactccgtctccctgacccgcttcctgcagagagagagggatgtgcggagtctggccgtg
ctcaaacagacgggcatcttcctggacacctataaggagtacagcagctcagtggggaac
ttcatggtgatgggtggcttcctaagcctgctcaaacccttgctggagtgttttgggaag
aagctggaggttcttcagcagctgtcggagcccaaagacaaaggttcccctaccggctcc
agtcctggttccagttctggtcctggtctgctgcagtcactgctctacctgcccgtcaaa
cacatgcaccagtacagtcggctcctgctgaagctggccacctgcttccatgtggagtct
gaggagtactctctgctggatgagcgctgctcccggtttgaggctgcggcactgcagctg
ctcaagcagaggaaggaggcagagaagacgctggacttctggaggagtctgcccaccaag
gcctctgatgccttgcggactccttgtcggcggttggtgtgtgagagcaactataaagcc
ctgaccctccagaacgcaggccgcttctccgtcaaccgcttcatcctcttcaacgacgcg
cttgtccacacacagggcaacattccgtctaagaagtttttctcgtcttaccacgtctat
cccctggccaccctgtggattgagcctctgtgtgaagaagatgacggactgtttggcctg
aagttcaccactccagaggacagttttacagccctggcctcatctcccgctgagaaggcc
agctggcttcgctccataaaccaggctgtggagaagcttctggaagcggagatggacgcc
aaggtcacagggtcaagcctaggcctggggtcaagcgggggtcatcggacggagtcgcgg
atgtcccgcacggccacacacaccttcgccaaggagggccgctacaaggacgccacctac
gagggacgctggctgtgtggcaaaccgcatggcaggggtaccatcaggtggcctgacgga
cgcgtctacatcggcatgttcaagcacggccaggaggacgggtttggagactttgtcatc
cccattaagaactcccataagacggaccactaccagggccactgcaaggagggcaagatg
cacggctttgggacctactggtatgcgtctggcgaggtgtacgagggctcgttctgggag
caccagcggcacggccacggcatgctgagcagcggcaagatggcctcctcctcctccagc
gtcttcgtcggacactgggtccacgaccgcaaggcggggtacggcgtcttcgacgacatc
accagaggtgagaagtatatgggcctgtgggtggacgatcagaagcaggggcatggcgtg
gtggtcacccagtttggcctctactatgagggacagttcagctctaacaagatgatgggc
ctgggcctgctgctggctgatgatgacacagcctatgaaggagacttctcagaagactgg
accctcaatgggaagggggtgctgtctctccctaacggtgataaaatggagggagtgttt
gtgggccagtggagctctggcctgaagatcgcaggcacctaccagaagcccaacccctac
gggccggagagagaccgggagaggaccagaccatgtaagctgggtggcatggcggtgcct
gcggatcagaagtgggcagctgtgtttgaggagtgctggaggcggctgggctgtgactcg
cctggacgaggagacaccagcagagcctgggacagcatcgccatcagcctgacacagaga
cagcacagagacagtcctgagcttctgacgcgctctcagcatatgaccctggaatgtctg
gaggtcattccccaactcaatggacagttcaccgcagagacctacaacaacgtccgacgc
tacctcatcaaggcgtgtgacacgccgctgcaccctctgggctggctgctggagacgctg
gtgacggtgtaccggatgacctatgtgggtgtgggctcaaacagacgcctgctgcaacag
gccgtgctggagatacagtcctacatctcccgcatctaccagctggtgaggttcctcttc
cccagtctccccgaggatggcacttttattcaggaggtttctgtggtggagaccctgtgc
agttccacagactctggcctgcactcagagattcctgagcaggggtttgtggtgagctgc
tgttccctgctgctgccggtgctgctgccgcgcctgtacccgccgctgttcacgctctac
tctctggagcacgagagggaggacgagctctactgggactgcgtctcccgcctcaacaag
cagcccgacagagcactcatgggcttcctgggggtccaccagaagttctggccagtcgcc
gccatctctgttttgggtgatccagaagaggtcctgaccagcactaaagacgcctgttac
gccacagctgtggagacccttcagcagataagcaccaccttcactcctgccaacaagctg
ctggtgatcaggcacacgtttgaggagatgacccaggaggcccagactctgctggacgag
gacttcaggtggtccatggacgacctcttccccctcttcctctatgtggtgttgcgagcc
cgtatcaggaacctgggttcagaggtgagcctgatagaggacctgatggacccccatctc
cagcacggagaagacggactcatgttcaccaccctcaaggcttgctacttccagatccag
cgagagaagaccgcataa
DBGET
integrated database retrieval system