Sardina pilchardus (sardine): 134079068
Help
Entry
134079068 CDS
T10667
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like
KO
K08518
syntaxin-binding protein 5
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134079068 (stxbp5l)
Membrane trafficking [BR:
spil04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
134079068 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
134079068 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_VPS8
Lgl_C
EIF3I
PEP5_VPS11_N
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Synaptobrevin
Beta-prop_EML
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
134079068
NCBI-ProteinID:
XP_062391222
LinkDB
All DBs
Position
4:complement(37131306..37263474)
Genome browser
AA seq
1074 aa
AA seq
DB search
MKKFRKVLDGLTTSSPASTGGSPSCGSAAGTPTAAPTPREIDIPETLMSENFQICKTVRH
GFPYQPTAVAFDPVQKILAIGSRSGGVRILGQPGVDSFCQHESGAAVLQLQFLINEGALV
TACSDDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
VLSGYVIMWNKAIELATKTHPGPVVHLSDSPKDEGRLLIGFESGTIVMWDLKAKKADFRI
YYDEAIHSVSWHHEGRQFMCSHSDGSLSMWNLRNTAKPFQVTFPHGKTQRDVRKESCKPI
LKVEYKTLTLQMLYKLKSSKVFEKPLTLQMLYKLKSSKVFEKPLTLQMLYKLKSSKVFEK
PLTLQMLYKLKSSKVFEKPRVCGAEGSRAADLAEEDPYAVQMVNWCPQSRLLCVVGISAN
LILFRLSRHEANANITALEVRLHCDMDEVISPSDTENNPCLSETSGHSPQPPGSPRPPTP
DGSRDTMACLKVKERVVRMPAGYQAELVVQLQWVDGEPPQPITSVDINSAYGLLAVGNCN
GLAVVDYLQKTVLLCMSTLDLYGPADPFQRLTRSPRKNRQSTSEHGLRGLSNFYSDSKKR
IRTSYQSLTELSDNQVSLDMERSKSPTSDHVNGHCPSPASSQQAVVGGRGRVTGGPAGEG
IRLARRGPGRPPFRKAQSAACMEISLPVATHTEESRENSFSRSRSSSVSSIDRDTKEAVS
ALQFGESYGRKGDALPTPCLWVGTSLGLVLLMPISIPTDDQERLEDPVTVAPTGTVLMLK
GSVLRFAFLDCGGAVMQTPYEVWRDPNASDDPERPRRRRLVNFSPGSSQEASAEGQLAVV
CSERQAKVFLMPSQACLYVHNITEASFVIRADVVSLNTSICLACFLANGHVMTLSLPSLR
PLLDVNYLPLTDMRIARTFCFTHGGQALYLNSPTEIQRITYSQDMCHNLQEMLGELFIPI
ETPEAQNRGFLKGFFGGNAQTFDREELFGEAAAGKASGSLAKHIPGQAGMEGMKVAAGGV
VGELARARVALDERGQRLGELEDRTALMMTSAECFSKNAHALMLRCKDKKWYQW
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttcggaaggtgttggacggtttgaccacctcctctcctgcgagtactggc
ggatcgccctcgtgcggcagcgccgctgggacccccactgcagcaccgaccccgcgtgag
atagacatcccggagacgctcatgtcagaaaacttccagatttgtaagacggtgcgtcat
ggcttcccttatcagcccactgctgtggcctttgatcctgtgcagaagattctggccatc
ggctctcgctctggaggagtacgcattctgggccagccgggagtggacagcttctgccaa
cacgagagtggagccgccgtgctgcagctgcagttcctcatcaacgagggggcgctggtc
acggcctgctcagatgacacccttcacctgtggaacctccgacaacgacgacctgctatc
ctgcactccctcaagttcaacagggagaggatcactttctgccacctgcccttccagagc
aagtggctgtatgtggggacggagcgcgggaacacccacatcgtcaacatcgagtccttc
gtcctgtctggctacgtcatcatgtggaacaaggccatagagctagcaaccaaaacacat
ccaggccctgtggtgcacctgagtgacagcccaaaagatgaagggaggctgctgattggc
tttgagagtggcaccattgtcatgtgggatctgaaggccaagaaagcagatttcaggatc
tattatgatgaggctatccactcagtgagctggcatcatgaggggaggcagttcatgtgc
agtcactcagacggcagcctgagcatgtggaacctgcgcaacacagccaagcccttccag
gttaccttcccccacggtaagacacagagggatgtgaggaaagagtcctgtaagcccatc
ctgaaggtggagtacaagaccttgacgctgcagatgctgtataagctgaagagctccaag
gtgtttgagaagccgctgacgctgcagatgctgtataagctgaagagctccaaggtgttt
gagaagccgctgacgctgcagatgctgtataagctgaagagctccaaggtgtttgagaag
ccgctgacgctgcagatgctgtataagctgaagagctccaaggtgtttgagaagccgcgt
gtgtgtggcgcggagggctcgcgggcggccgatctggcggaggaggacccgtacgccgtg
cagatggtcaactggtgcccacagagccgcctgctgtgtgtggtgggcatctccgccaac
ctcatcctcttccgcctcagccggcacgaggccaacgccaacatcaccgctctggaggtg
cgtctgcactgtgatatggatgaggtgatatcgccgtcggatacggagaacaatccctgt
ctctcggagaccagtggccactccccccaaccgccagggagtccccgcccccccacaccc
gacggcagcagagacaccatggcctgcctcaaggtgaaggagcgggtggtgcggatgcct
gctggctatcaggctgagctggtggtgcagctgcagtgggtggatggggagcctcctcag
ccaatcacaagcgtcgacatcaactccgcctacggcctgctggctgtgggcaactgtaat
ggtctggcggtggtggactacctgcagaagacggtgctgttgtgcatgagcacgctggac
ctctacggacctgctgaccccttccagcgcctgacccgctccccacgcaagaaccgccag
tccacctccgagcatggcttgcgtggcctgtctaacttttattccgactcaaagaaacgg
atccgcacgtcctaccagagccttacggaactctccgataaccaagtgtctctggacatg
gagcgcagcaagtccccaacctcagatcatgtgaatggccactgtccgagccccgcgtcc
tcccagcaggccgttgtgggggggcggggccgagtgacgggcgggccggcgggggaaggg
atccgattggcccgcaggggccccggcagaccgcccttccgaaaagcccagtccgccgca
tgcatggagatctccctgcctgtcgccacgcacaccgaagagagcagggagaactcgttc
agtcgctcgcgcagctccagcgtgtccagtattgaccgggacactaaggaggcggtgagc
gcgctgcagttcggcgagtcgtacggccgtaagggggacgcgctgcccacgccatgcctc
tgggtgggcaccagtctgggcctcgtgctcctcatgcccatctccatacccaccgacgac
caggagcgcctggaggaccctgtcactgtggcacccaccggcacggtgttgatgctgaaa
ggctcggtgctgcgctttgccttcctggactgcgggggcgctgtgatgcagacgccgtac
gaggtgtggcgcgaccccaacgccagcgatgaccccgagcgtccgcggcggcggcggctg
gtcaacttctccccgggctcgtcgcaggaggccagcgcggagggccagctggccgtggtg
tgctcggagcggcaggctaaagtgttcctcatgccctcgcaggcctgtctctacgtgcac
aacatcaccgaggcctccttcgtcatccgcgcagacgtcgtctccctcaacaccagcatc
tgcctcgcatgcttcctcgccaacggacacgtcatgaccctcagtctgcccagcctgcgg
ccgctgctggacgtgaactacctgcctctgacggacatgcgcatcgcgcggacgttctgc
ttcacccacggagggcaggccctctacctgaactcccccaccgagatccagcgcatcacc
tacagccaggacatgtgccacaacctgcaggagatgctgggggagctctttatccccata
gagacgcctgaggcccagaacagaggcttcctcaagggcttctttggaggcaacgcacag
accttcgacagagaggagctctttggcgaggcggcagcgggcaaggcgtcgggcagcctg
gcgaagcacatcccggggcaggcgggcatggagggcatgaaggtggcggccggcggggtg
gtgggggagctggcgcgcgcccgcgtggcgctggacgagagggggcagcggctgggcgag
ctggaggaccgcaccgccctcatgatgaccagcgcagagtgcttctccaagaacgcccac
gcgctgatgctgaggtgtaaggacaagaagtggtaccagtggtag
DBGET
integrated database retrieval system
