Sardina pilchardus (sardine): 134079224
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Entry
134079224 CDS
T10667
Name
(RefSeq) TBC1 domain family member 8 isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134079224
Membrane trafficking [BR:
spil04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
134079224
Endosome - Golgi transport
Rab GTPases and associated proteins
134079224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
134079224
NCBI-ProteinID:
XP_062391424
LinkDB
All DBs
Position
4:complement(39507180..39542515)
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AA seq
1064 aa
AA seq
DB search
MWLTPEEVPVKSALKLWLAEKSNEFFVLQRRRGHGDSGGRLTGMLVGALDTVLDSNARVT
PFRIVLQVPGSQVSWVIASGASLEEVRTHWCWLEVNLLDSLSVFENKEDITSFVNGKIKG
LIADECVGEPDPEGSREVCVRLEQRFGLPPREKLAAQFTCCLWKSHVPRQGWMYLTHNHL
AFYSYLLGKEVKLLLPWAEVTGVECVCVGRVTDVLRVRTRTRQRDFSMFLSMDDAMATIT
QLTDLALRRVLPTAGLRTPHTLIHTQLTKRALDDHVLTQDVLSQFGLPRRECVCEVRVCA
LWTPYLRSHTHGTLFATDTYLCFSSREPGVCVLIIPLSEVLSVEKAETSSVLPDPVIVSV
RGRRAFQMVGVCERDTLLQAVTDRLRTLRWRHAVYRGQHTHATPLISTTPYYTFCYDTDG
EADKSQRHIISTRPLISLSQSQMPKHKAALERRKEALWEERFEEFGRGVHMFRTACLYRL
VAMGIPESLRGELWLTLSDAGSELASHPGYYAELVERSLAEVSVTTDEIERDLHRSLPEH
PAFQSESGINALRRVLRAYATHNTHIGYCQSMNILASVLLLYSKEEEAFWLLVTVCERML
PDYFNKQVIGAQVDQSVFEELLRERVPELCVCVPDVSALASVSLSWFLTLFLSVVPLASG
VCVLDAFFCLGARLIFQLALCVLHTHTHTLTSSTDEGHALMILTSFLEQVKHDEEDCVCA
EAAAGTAEHTHITTLLKEAYERFGDISAKRLERLRCRHRIQVLQSHEDTIKENALRLVIP
EVSLSAEELSELYDFIKTEHLISVYWGDGVCVSGVCSEGYQLDLPQFKSVYSSLSPWQEG
AHTDTVARRTFTLLDQNQSNLLTFTQISHWLDMLYCEELNVKIRWLYRLHIPPALMDSED
DPSPLKSPLLSTTRPLHVDRPNGESGYEEQLKQMLKDLAKEKEKDSEKPLPPMNQREFIQ
FCKTLSNMFHGDEEESELFQAIAMVTSLVLQIGEAGQRGGAGPEEASRCDWSVSLAQILA
SLLTEAALVAFFERHGDLRARIATATQRQYQQRAGILELEHGST
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcaccccggaggaggttcccgtgaagagcgcgctcaagctctggctcgcggag
aaatccaatgagttcttcgtgctgcagcgacggagggggcacggggacagcggcgggagg
ttgaccggtatgctggtgggggctctggatactgtgctggactctaatgcacgtgtcaca
ccgttccggattgttctccaggtgcctggctcacaagtcagctgggttatcgctagtgga
gcctctctagaggaagtgagaacacactggtgctggctagaggtgaacctgctcgactcc
ctctcagtgtttgagaacaaggaggacatcaccagctttgtcaacggcaaaatcaagggc
ctcatagcggatgagtgtgtgggtgagccggaccccgagggcagccgtgaggtgtgtgtg
cggctggagcagcggttcggtctgcccccccgagagaagctggcggctcagttcacctgc
tgcctgtggaagagtcacgtgccgcgccagggctggatgtacctcacacacaaccacctg
gccttctactcatacctgctgggcaaggaagtgaagctgttgttgccgtgggcggaggtg
acgggcgtggagtgtgtgtgtgttggccgcgtgacggacgttctgcgcgtgagaacccgg
acgcgccagcgtgacttctccatgttcctcagcatggacgacgccatggcaaccattacg
caactcaccgacctcgccctccgcagagtcctgcccaccgccggcctccgaacccctcac
acactcatacacacgcagctcaccaagagggcgctggatgaccacgtgctcactcaggat
gtgttgtcccagtttggtctgccgcggcgtgagtgtgtgtgtgaggtgcgggtgtgtgcc
ctgtggacgccctacctgcgctcacacacacacggaactctcttcgccaccgacacctac
ctgtgcttcagcagcagagaaccaggagtgtgtgtgctcatcatccctctgtctgaggtg
ttgtcggtggagaaggcggagacgtcgagtgtgttgccggacccggtgatcgtgagcgtg
cgcggccggcgggcgttccagatggtgggtgtgtgtgagcgcgacacactcctgcaggcc
gtcaccgaccgactccgcacgctgcgctggagacacgccgtctacagaggacaacacaca
cacgctacgcctctgatctccacgactccatactacacattctgttatgacacggatgga
gaggctgacaaatctcagagacacatcatcagtacccgccccctcatctctctcagccaa
tcacagatgccaaagcacaaggccgcgttggagcggcgtaaggaggccttgtgggaggag
cgctttgaggagtttggtcgtggagtgcacatgttccgcaccgcctgcctctacaggctg
gttgccatggggatcccagagtcactccggggagagctgtggctcacactctcagacgcg
ggctcggagttggcgtcccaccccggctactacgcggagctggtggagcgctcgctggcc
gaggtctccgtgacgacggacgagatcgagcgggatctgcaccggtcgctaccggaacac
ccggccttccagagcgagagcggaatcaacgcgctgcgcagagttctgagggcctacgcc
acccacaacacacacatcggatactgccagtctatgaacatcctggcgtcagtgttgctt
ctctactctaaggaggaggaggccttctggctactggtcaccgtgtgtgagaggatgctg
cccgactacttcaacaaacaagtcataggggcccaggtggaccagtctgtgtttgaggag
ctgttgcgtgagcgtgtgccggagctgtgtgtgtgtgttccggacgtgagtgcgctggcg
tccgtgtccttgtcctggttcctcacgctgttcctgagcgtggttccgttggccagcgga
gtgtgtgtgctcgacgcgttcttctgcctcggcgcacgcctcatcttccagctggccctc
tgtgtcctgcacacacacacacacactctcaccagcagcaccgacgagggccacgcgctc
atgatcctcaccagtttcctggagcaggtcaagcatgacgaagaggactgtgtgtgtgct
gaagcagcagcaggcacagctgaacacacacacatcacgactctactcaaagaggcctac
gagaggtttggtgatatcagtgctaagcggttggaaaggctgcggtgtcgtcatcgtatc
caggtgttgcagtcacacgaggacaccatcaaggagaatgctctcaggttggtgatccct
gaagtatctctatctgctgaggagctctcagaactctacgacttcatcaagactgagcac
ctgatcagtgtgtactggggagacggcgtgtgtgtgtcgggtgtgtgtagcgagggctac
cagctggacctgcctcagttcaagagtgtgtactcctcgctgtcgccatggcaagaggga
gcgcacacggatacggttgctaggcgcaccttcacactgctggaccagaatcagagcaac
ctgctcaccttcacacagatcagccactggctagacatgctgtactgtgaggagctgaac
gtgaagatcaggtggttgtatcgcctgcacatccctccagctttgatggacagcgaggat
gacccctcccccttgaagtccccgctgctgtcaaccacgagacctcttcatgtggaccga
cccaacggggagagtggctatgaggagcagctgaaacagatgttgaaggatctggccaaa
gagaaggagaaggactcagagaagccactgccacccatgaaccagagggagtttatccag
ttctgcaagacgctgtccaacatgttccacggggacgaggaggagagcgagctgttccag
gccatcgccatggtgaccagtctggtgctgcagatcggggaggcggggcagcgcgggggg
gcggggcctgaggaggcgtcgcgctgtgattggtcggtgagcctggcgcagatcctggcg
tcgttgctcacggaggcggctctggtggcgttcttcgagcgccacggcgacctcagggca
cgcatcgccacggcaacccagcgccagtaccagcagcgcgccggcattctggagctggag
cacggcagcacctga
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