Sardina pilchardus (sardine): 134079236
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Entry
134079236 CDS
T10667
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
134079236
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
GxGYxYP_N_3rd
Motif
Other DBs
NCBI-GeneID:
134079236
NCBI-ProteinID:
XP_062391458
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Position
4:complement(39996229..40013769)
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AA seq
629 aa
AA seq
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MAVSMASPVCLVDNGPDGCMRVQQEALQVLEQIQQPVVVVAVVGLYRTGKSYLMNRLAGK
HTGFALGSTIESKTKGIWMWCVPHPSKPGHTLVLLDTEGLGDVEKGDEKHDTWIFCLAVL
LSSSLVYNSMGTIDNTALEKLQYVTELTEHIKVKSSGYDQATELMRVFPSFVWTVRDFTL
ELIMNGKPITADQYLESALKLKPGHTAEISRHNQVRQGLRDFFAERRCFVFERPANTKKM
HRMEELTDADLDSDFVEAAKEFCSHIFSSAKPKTMRGGLGVTGRMLGSLAETYVEAIRSG
QVPCLDSAVESLALIQNGRAVAEALEFYQREMERGVRLPTETQEALSQIHSAAEKQAVHI
FVSGSFNDQEHKHQIELMTIMQERYEEWCRRNVLESRRVCRGVLSRVCAALDEAVVGGAY
TRPGGYDAYCGDLKEATQLYRAEQGTGLLREEVLTEYLKEKSAVGENILSADRSLTEAQQ
RMEVEKMRRAEAEQQRRLLEEHNRIQQQAIQDQQRSNQENMRQMEAKMEEERLRAKEELE
RVVSAKLKEQENSLSEGFKERAGQMQAEVDKLKQEQQQRQQQAQQQGSSWLDTTADVLES
GGMAAALVPGWGLAGLGSMVVGKVLRWLK
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctccatggcgtccccggtgtgtctggttgataacgggcctgacgggtgcatg
cgtgtccagcaggaggcgctgcaggtgctggagcagatccagcagccggtggtggtggtg
gccgtggtggggctctaccgcacgggcaagtcctacctcatgaaccggctggccggcaaa
cacacagggtttgctctgggcagcaccatcgagtccaaaaccaaaggaatctggatgtgg
tgtgtacctcacccctctaaaccaggacacactctggtgctgcttgacacagaaggactt
ggagatgttgagaagggcgacgagaaacatgacacgtggatcttctgtctggctgttcta
ctcagcagctctctggtctacaacagcatgggcaccatcgacaacactgccctggagaaa
ctgcaatatgtgacggaactgacagagcacatcaaggtgaagtccagcggttatgaccag
gccacggagctgatgcgtgtgttcccgtccttcgtgtggacggtcagagacttcaccctg
gagctgatcatgaacggcaaacccatcactgctgaccagtacctggagagtgccctgaag
ctcaaaccaggccacactgctgagatctcgaggcacaaccaggtgcgtcagggcctgagg
gatttctttgctgagcgccgctgctttgtgttcgagcgtccggccaacaccaagaagatg
catcgcatggaggagctgacggacgcagacctggatagcgactttgtggaggcagccaag
gagttctgcagccacatattcagcagtgccaagcccaaaaccatgaggggcggcctgggg
gtcaccggcaggatgctgggcagcctggcagagacgtatgtggaggcgatccgcagtggg
caggtgccctgtctggacagcgctgtggagtctctggcgctaatccagaacgggcgcgcc
gtggcagaggcgctggagttctaccagagagagatggagcgcggggtgcgcttacccacc
gagacacaggaggcgctgtctcagatccactctgctgcagagaaacaggccgttcacatc
tttgtcagcggatcctttaacgaccaagaacacaagcaccagatcgagctcatgacgatc
atgcaggagcggtatgaggagtggtgtcggcgcaacgtgctggagtcgcggcgtgtgtgt
cgaggcgtcctgtcccgcgtgtgtgctgctctggacgaggccgtggtggggggggcgtac
acgcggccgggggggtacgatgcctactgcggagacctgaaggaggccacacaactctac
agagcagaacagggcactggactactgagagaggaggtcctgacggagtatctgaaggag
aagagtgccgttggagagaacatcctgtcagctgaccgctccctgactgaagcccagcag
aggatggaagtggagaagatgaggcgagcggaggcggagcagcagaggaggctcctggag
gagcacaaccgcatccagcagcaggccatccaggaccagcagaggagcaaccaggagaac
atgcggcagatggaggccaagatggaggaggagcggctcagagccaaggaggagctggag
cgtgtggtctccgctaaactgaaggagcaagagaactctctgagcgagggctttaaggag
cgcgctggacagatgcaggcggaggtggacaagctgaagcaggagcagcagcagaggcag
cagcaggcgcagcaacaaggctcctcctggctggacaccacagcggacgtgctggagagt
ggcgggatggcagccgcccttgttcccggctgggggctcgcaggactgggctctatggta
gtggggaaggtccttcgctggctgaagtag
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